RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	VPS20	Q04272	221 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	GAD1	Q04792	585 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	CSR1	Q06705	408 aa	Known RBP	3.88	□□□□□ -1.79
YAL004W	YAL004W	ENV7	Q12003	364 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	PLP2	Q12017	286 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	APL4	Q12028	832 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	YPL150W	Q12152	901 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	NFI1	Q12216	726 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	PNS1	Q12412	539 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	PTC5	Q12511	572 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	RRP5	Q05022	1729 aa	Known RBP	3.87	□□□□□ -1.79
YAL004W	YAL004W	ARG3	P05150	338 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	RPL19A	P0CX82	189 aa	Known RBP	3.87	□□□□□ -1.79
YAL004W	YAL004W	RPL19B	P0CX83	189 aa	Predicted RBP	3.87	□□□□□ -1.79
YAL004W	YAL004W	MATALPHA2	P0CY08	210 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	HMLALPHA2	P0CY09	210 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	SAM35	P14693	329 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	OLE1	P21147	510 aa	Known RBP	3.87	□□□□□ -1.79
YAL004W	YAL004W	MIH1	P23748	554 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	CLB4	P24871	460 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	SEC21	P32074	935 aa	Known RBP	3.87	□□□□□ -1.79
YAL004W	YAL004W	CBF2	P32504	956 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	SMI1	P32566	505 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	SAC6	P32599	642 aa	Known RBP	3.87	□□□□□ -1.79
YAL004W	YAL004W	AFG2	P32794	780 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	RIB7	P33312	244 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	TGL1	P34163	548 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	RMA1	P36001	430 aa	Known RBP	3.87	□□□□□ -1.79
YAL004W	YAL004W	FAT1	P38225	669 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	IFA38	P38286	347 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	PNT1	P38969	423 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	STL1	P39932	569 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	EAF5	P39995	279 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	LCB2	P40970	561 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	RPN11	P43588	306 aa	Known RBP	3.87	□□□□□ -1.79
YAL004W	YAL004W	YJL055W	P47044	245 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	YGL082W	P53155	381 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	PIB2	P53191	635 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	ENV11	P53246	860 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	SSL2	Q00578	843 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	ADA2	Q02336	434 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	YDR132C	Q03900	495 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	RNH1	Q04740	348 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	ETT1	Q08421	412 aa	Known RBP	3.87	□□□□□ -1.79
YAL004W	YAL004W	HAL9	Q12180	1030 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	ZRT2	Q12436	422 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	RTN2	Q12443	393 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	POM152	P39685	1337 aa		3.87	□□□□□ -1.79
YAL004W	YAL004W	USO1	P25386	1790 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	YLR358C	O13565	187 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	MIS1	P09440	975 aa	Known RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	MCM3	P24279	971 aa	Known RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	STE50	P25344	346 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
YAL004W	YAL004W	NNK1	P36003	928 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	TEF4	P36008	412 aa	Known RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	YHL017W	P38745	532 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	PIK1	P39104	1066 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	SWD1	P39706	426 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	SCS2	P40075	244 aa	Known RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	RSM25	P40496	264 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	SLS1	P42900	643 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	PUS4	P48567	403 aa	Known RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	SHE10	P53075	577 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	RRT6	P53117	311 aa	Predicted RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	SLI1	P53304	468 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	BSC5	P53755	489 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	HOS3	Q02959	697 aa	Known RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	HOT1	Q03213	719 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	YDR131C	Q03899	556 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	SNO4	Q04902	237 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	YLR407W	Q06070	228 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	RPN7	Q06103	429 aa	Known RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	YPR172W	Q06608	200 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	PUS7	Q08647	676 aa	Known RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	HSP33	Q08914	237 aa	Known RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	HSP32	Q08992	237 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	BUG1	Q12191	341 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	PDH1	Q12428	516 aa	Known RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	SKM1	Q12469	655 aa		3.86	□□□□□ -1.79
YAL004W	YAL004W	RRP36	Q12481	300 aa	Predicted RBP	3.86	□□□□□ -1.79
YAL004W	YAL004W	YMR084W	A2P2R3	262 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	RPL11A	P0C0W9	174 aa	Known RBP	3.85	□□□□□ -1.79
YAL004W	YAL004W	ADH4	P10127	382 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	HSF1	P10961	833 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	BET2	P20133	325 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	CBP3	P21560	335 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	RAD51	P25454	400 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	CYS3	P31373	394 aa	Known RBP	3.85	□□□□□ -1.79
YAL004W	YAL004W	PUP2	P32379	260 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	TFB1	P32776	642 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	SRP68	P38687	599 aa	Known RBP	3.85	□□□□□ -1.79
YAL004W	YAL004W	CRG1	P38892	291 aa	RIP-Chip data	3.85	□□□□□ -1.79	not detected
YAL004W	YAL004W	LTP1	P40347	161 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	PRM2	P40534	656 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	CCT7	P42943	550 aa	Known RBP	3.85	□□□□□ -1.79
YAL004W	YAL004W	ART5	P53244	586 aa	Known RBP	3.85	□□□□□ -1.79
YAL004W	YAL004W	SNO2	P53823	222 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	GYL1	Q04322	720 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	DPB4	Q04603	196 aa	Known RBP	3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms