RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Rab4aP56371 218 aa17.07■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Fam110dQ80X91 271 aa17.07■□□□□ 0.32
Scn1b-201ENSMUST00000098548 3110018I06RikQ9CXS0 120 aa17.07■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Ighv1-82A0A0G2JEU7 117 aa17.06■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Rasl10aQ8K5A4 203 aa17.06■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Trav14d-1A0A075B6B1 121 aa17.06■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Olfr1431Q8VF59 312 aa17.06■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Cml3Q9JIY8 226 aa17.06■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Dusp14Q9JLY7 198 aa17.06■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Ighv1-23A0A0A6YVW3 117 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Ighv1-9A0A0A6YW37 117 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Igkv20-101-2A0A0G2JDU3 113 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Igkv4-81A0A0G2JEY5 119 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Foxi3E0CZH3 425 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 LhbO09108 141 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Vamp3P63024 103 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Fa2hQ5MPP0 372 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Olfr1437Q7TQR7 312 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 RfxapQ8VCG9 231 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Klk7Q91VE3 249 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Nit2Q9JHW2 276 aa17.05■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Ighv1-64A0A075B5X3 117 aa17.04■□□□□ 0.32
Scn1b-201ENSMUST00000098548 1810011H11RikE9PVZ2 95 aa17.04■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Foxc2Q61850 494 aa17.04■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Psmb11Q8BG41 302 aa17.04■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Gm14214V9GX35 225 aa17.04■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Odf1Q61999 247 aa17.03■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Tctex1d1Q9D5I4 173 aa17.03■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Ramp1Q9WTJ5 148 aa17.03■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Trav19A0A0B4J1K4 119 aa17.02■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Gm6176J3QK59 301 aa17.02■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Snrpd3P62320 126 aaKnown RBP17.02■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Gm4567Q3UTA8 301 aa17.02■□□□□ 0.32
Scn1b-201ENSMUST00000098548 H2al1nQ497L1 109 aa17.02■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Jpt2Q6PGH2 190 aaKnown RBP17.02■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Olfr1404Q8VGE1 313 aa17.02■□□□□ 0.32
Scn1b-201ENSMUST00000098548 Igkv4-70A0A0B4J1I5 116 aa17.02■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Gm42420A0A0J9YUQ2 99 aa17.02■□□□□ 0.31
Scn1b-201ENSMUST00000098548 P01750 117 aa17.02■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Runx1Q03347 451 aa17.02■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Gm5105Q8C6Y9 112 aa17.02■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Olfr975Q8VG91 310 aa17.02■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Gtsf1lQ9CWD0 151 aa17.02■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Timm10bQ9WV96 100 aa17.02■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Ighv9-1A0A0B4J1P3 117 aa17.01■□□□□ 0.31
Scn1b-201ENSMUST00000098548 P01739 132 aa17.01■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Ighv1-62-3P01754 117 aa17.01■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Ang5Q5GAN1 145 aa17.01■□□□□ 0.31
Scn1b-201ENSMUST00000098548 TctaQ8VEA7 122 aa17.01■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Ube2tQ9CQ37 204 aa17.01■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Hspg2Q05793 3707 aaKnown RBP17■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Gm2564F6Z9S8 108 aa17■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Ccl19O70460 108 aa17■□□□□ 0.31
Scn1b-201ENSMUST00000098548 CnfnQ6PCW6 111 aa17■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Trav14-3A0A075B607 120 aa16.99■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Gm11733Q8BQP1 125 aa16.99■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Nhlrc1Q8BR37 401 aa16.99■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Slc16a4Q8R0M8 500 aa16.99■□□□□ 0.31
Scn1b-201ENSMUST00000098548 SmagpQ99KC7 97 aa16.99■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Ighv1-12A0A0A6YXJ9 117 aa16.98■□□□□ 0.31
Scn1b-201ENSMUST00000098548 7420426K07RikQ3UX66 186 aa16.98■□□□□ 0.31
Scn1b-201ENSMUST00000098548 H1fxQ80ZM5 188 aa16.98■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Rtl10D3YWW5 146 aa16.98■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Vmn1r1E9PVR6 306 aa16.98■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Vmn1r119E9Q4H3 307 aa16.98■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Rab24P35290 203 aa16.98■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Ighv1-50A0A075B5W1 117 aa16.97■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Mmp23O88676 391 aa16.97■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Psmb8P28063 276 aa16.97■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Fhl1P97447 280 aaKnown RBP16.97■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Ndufa4l2Q4FZG9 87 aa16.97■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Ighv5-9-1A0A0A6YVS4 126 aa16.96■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Gm20517G3UVU6 152 aa16.96■□□□□ 0.31
Scn1b-201ENSMUST00000098548 LalbaP29752 143 aa16.96■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Acrv1P50289 261 aa16.96■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Gm10842Q3U587 122 aa16.96■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Khdc1aQ3UWR2 166 aa16.96■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Gm9944Q8C559 102 aa16.96■□□□□ 0.31
Scn1b-201ENSMUST00000098548 Hcfc2Q9D968 241 aa16.96■□□□□ 0.31
Scn1b-201ENSMUST00000098548 SelenokQ9JLJ1 94 aa16.96■□□□□ 0.31
Scn1b-201ENSMUST00000098548 CebpgP53568 150 aa16.95■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Obox1Q9D350 204 aa16.95■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Tmem160Q9D938 188 aa16.95■□□□□ 0.3
Scn1b-201ENSMUST00000098548 TbpP29037 316 aa16.94■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Cacng7P62956 275 aa16.94■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Ormdl3Q9CPZ6 153 aa16.94■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Tmem88Q9D0N8 159 aa16.94■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Nudt3Q9JI46 168 aa16.94■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Scgb1b10A0A087WPW0 93 aa16.93■□□□□ 0.3
Scn1b-201ENSMUST00000098548 A930009A15RikG3UYI6 118 aa16.93■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Fabp4P04117 132 aa16.93■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Rbfox3Q8BIF2 374 aa16.93■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Leprotl1Q9CQ74 131 aa16.93■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Fmc1Q9CR13 113 aa16.93■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Mrpl53Q9D1H8 118 aaKnown RBP16.93■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Fam216aQ9DB54 251 aa16.93■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Smim15Q3UTD9 74 aa16.92■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Dmbt1Q60997 2085 aa16.92■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Olfr1012Q8VFJ7 311 aa16.91■□□□□ 0.3
Scn1b-201ENSMUST00000098548 H2al2bA9Z055 111 aa16.9■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms