RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm35339A0A140LHH9 1649 aa49,03■■■■■ 5,44
Scn1b-201ENSMUST00000098548 NischQ80TM9 1593 aa48,73■■■■■ 5,39
Scn1b-201ENSMUST00000098548 Abcc9P70170 1546 aa47,22■■■■■ 5,15
Scn1b-201ENSMUST00000098548 Abcc8B2RUS7 1588 aa46,93■■■■■ 5,1
Scn1b-201ENSMUST00000098548 ScribQ80U72 1612 aa44,91■■■■■ 4,78
Scn1b-201ENSMUST00000098548 Kdm5dQ62240 1548 aa43,57■■■■■ 4,56
Scn1b-201ENSMUST00000098548 NacadQ5SWP3 1504 aa43,49■■■■■ 4,55
Scn1b-201ENSMUST00000098548 Dcaf1Q80TR8 1506 aa43,26■■■■■ 4,52
Scn1b-201ENSMUST00000098548 Rhox8Q6VSS7 320 aa42,84■■■■■ 4,45
Scn1b-201ENSMUST00000098548 Sycp2Q9CUU3 1500 aa42,64■■■■■ 4,42
Scn1b-201ENSMUST00000098548 Rb1cc1Q9ESK9 1588 aa42,54■■■■■ 4,4
Scn1b-201ENSMUST00000098548 BicraF8VPZ9 1578 aa41,99■■■■■ 4,31
Scn1b-201ENSMUST00000098548 Baz1aO88379 1555 aa41,95■■■■■ 4,31
Scn1b-201ENSMUST00000098548 Ccdc180J3QNE4 1664 aa41,92■■■■■ 4,3
Scn1b-201ENSMUST00000098548 Crybg2B7ZCC2 1516 aa41,58■■■■■ 4,25
Scn1b-201ENSMUST00000098548 Zcchc6Q5BLK4 1491 aaKnown RBP41,29■■■■■ 4,2
Scn1b-201ENSMUST00000098548 Rtl1Q7M732 1744 aa40,87■■■■■ 4,13
Scn1b-201ENSMUST00000098548 Smarca2Q6DIC0 1577 aa40,81■■■■■ 4,12
Scn1b-201ENSMUST00000098548 Pds5bQ4VA53 1446 aaKnown RBP40,57■■■■■ 4,08
Scn1b-201ENSMUST00000098548 Cecr2E9Q2Z1 1453 aa40,51■■■■■ 4,08
Scn1b-201ENSMUST00000098548 Atad2bE9Q166 1460 aaKnown RBP40,34■■■■■ 4,05
Scn1b-201ENSMUST00000098548 Smarca4Q3TKT4 1613 aaKnown RBP40,31■■■■■ 4,04
Scn1b-201ENSMUST00000098548 Thoc2B1AZI6 1594 aaKnown RBP40,04■■■■■ 4
Scn1b-201ENSMUST00000098548 Ccdc136Q3TVA9 1136 aa40,02■■■■■ 4
Scn1b-201ENSMUST00000098548 Iqgap2Q3UQ44 1575 aa40,02■■■■■ 4
Scn1b-201ENSMUST00000098548 Dnajc5bQ9CQ94 199 aa39,98■■■■□ 3,99
Scn1b-201ENSMUST00000098548 Ercc6F8VPZ5 1481 aa39,77■■■■□ 3,96
Scn1b-201ENSMUST00000098548 Synj1Q8CHC4 1574 aa39,67■■■■□ 3,94
Scn1b-201ENSMUST00000098548 Brd4Q9ESU6 1400 aaKnown RBP39,64■■■■□ 3,94
Scn1b-201ENSMUST00000098548 CftrP26361 1476 aa39,63■■■■□ 3,93
Scn1b-201ENSMUST00000098548 Wdr62Q3U3T8 1523 aa39,56■■■■□ 3,92
Scn1b-201ENSMUST00000098548 Cttnbp2B9EJA2 1648 aa39,54■■■■□ 3,92
Scn1b-201ENSMUST00000098548 Frmpd1A2AKB4 1549 aa39,53■■■■□ 3,92
Scn1b-201ENSMUST00000098548 Cc2d2aQ8CFW7 1633 aa39,48■■■■□ 3,91
Scn1b-201ENSMUST00000098548 Trim41Q5NCC3 630 aa39,29■■■■□ 3,88
Scn1b-201ENSMUST00000098548 Fam135aQ6NS59 1506 aa39,25■■■■□ 3,87
Scn1b-201ENSMUST00000098548 Phldb1Q6PDH0 1371 aaKnown RBP39,09■■■■□ 3,85
Scn1b-201ENSMUST00000098548 Unc13aQ4KUS2 1712 aa39,09■■■■□ 3,85
Scn1b-201ENSMUST00000098548 Esf1Q3V1V3 845 aaKnown RBP38,99■■■■□ 3,83
Scn1b-201ENSMUST00000098548 Ubl4bQ9CQ84 188 aa38,77■■■■□ 3,8
Scn1b-201ENSMUST00000098548 Baz1bQ9Z277 1479 aa38,58■■■■□ 3,77
Scn1b-201ENSMUST00000098548 Golga3P55937 1487 aa38,55■■■■□ 3,76
Scn1b-201ENSMUST00000098548 Cngb1E1AZ71 1325 aa38,48■■■■□ 3,75
Scn1b-201ENSMUST00000098548 Top2bQ64511 1612 aa38,44■■■■□ 3,74
Scn1b-201ENSMUST00000098548 Rsf1E9PWW9 1441 aaKnown RBP38,41■■■■□ 3,74
Scn1b-201ENSMUST00000098548 Kif15Q6P9L6 1387 aa38,34■■■■□ 3,73
Scn1b-201ENSMUST00000098548 Mrc2Q64449 1479 aa38,33■■■■□ 3,73
Scn1b-201ENSMUST00000098548 Lamc3Q9R0B6 1581 aa38,3■■■■□ 3,72
Scn1b-201ENSMUST00000098548 Cux2P70298 1426 aa38,16■■■■□ 3,7
Scn1b-201ENSMUST00000098548 TnnQ80Z71 1560 aa38,08■■■■□ 3,69
Scn1b-201ENSMUST00000098548 Fmn1Q05860 1466 aa37,95■■■■□ 3,67
Scn1b-201ENSMUST00000098548 HrcG5E8J6 738 aa37,81■■■■□ 3,64
Scn1b-201ENSMUST00000098548 Npm1Q61937 292 aaKnown RBP37,78■■■■□ 3,64
Scn1b-201ENSMUST00000098548 Ccdc88bQ4QRL3 1481 aa37,78■■■■□ 3,64
Scn1b-201ENSMUST00000098548 Kif21aQ9QXL2 1672 aa37,76■■■■□ 3,64
Scn1b-201ENSMUST00000098548 Il27Q8K3I6 234 aa37,73■■■■□ 3,63
Scn1b-201ENSMUST00000098548 Camsap1A2AHC3 1581 aa37,71■■■■□ 3,63
Scn1b-201ENSMUST00000098548 Ccdc18Q640L5 1455 aa37,68■■■■□ 3,62
Scn1b-201ENSMUST00000098548 Cep164Q5DU05 1446 aa37,67■■■■□ 3,62
Scn1b-201ENSMUST00000098548 Chic1Q8CBW7 227 aa37,63■■■■□ 3,61
Scn1b-201ENSMUST00000098548 Lrriq1Q0P5X1 1673 aa37,52■■■■□ 3,6
Scn1b-201ENSMUST00000098548 LrpprcQ6PB66 1392 aaKnown RBP37,43■■■■□ 3,58
Scn1b-201ENSMUST00000098548 Dhx29Q6PGC1 1365 aaKnown RBP37,4■■■■□ 3,58
Scn1b-201ENSMUST00000098548 Top2aQ01320 1528 aaKnown RBP37,39■■■■□ 3,58
Scn1b-201ENSMUST00000098548 PogzQ8BZH4 1409 aaKnown RBP37,27■■■■□ 3,56
Scn1b-201ENSMUST00000098548 Grin2bQ01097 1482 aa37,26■■■■□ 3,55
Scn1b-201ENSMUST00000098548 Crocc2F6XLV1 1638 aa37,23■■■■□ 3,55
Scn1b-201ENSMUST00000098548 Urb2E9Q7L1 1524 aaKnown RBP37,19■■■■□ 3,54
Scn1b-201ENSMUST00000098548 Plb1Q3TTY0 1478 aa37,18■■■■□ 3,54
Scn1b-201ENSMUST00000098548 Duox2A2AQ99 1517 aa37,13■■■■□ 3,53
Scn1b-201ENSMUST00000098548 NrkQ9R0G8 1455 aa36,97■■■■□ 3,51
Scn1b-201ENSMUST00000098548 PtprkP35822 1457 aa36,95■■■■□ 3,51
Scn1b-201ENSMUST00000098548 Eif4g3Q80XI3 1579 aaKnown RBP36,94■■■■□ 3,5
Scn1b-201ENSMUST00000098548 Efcab5A0JP43 1406 aa36,92■■■■□ 3,5
Scn1b-201ENSMUST00000098548 Samd9lQ69Z37 1561 aa36,9■■■■□ 3,5
Scn1b-201ENSMUST00000098548 Shroom4Q1W617 1475 aa36,87■■■■□ 3,49
Scn1b-201ENSMUST00000098548 Gab3Q8BSM5 595 aa36,84■■■■□ 3,49
Scn1b-201ENSMUST00000098548 Ift140E9PY46 1464 aa36,8■■■■□ 3,48
Scn1b-201ENSMUST00000098548 Disp1Q3TDN0 1521 aa36,72■■■■□ 3,47
Scn1b-201ENSMUST00000098548 Rad54l2Q99NG0 1466 aa36,67■■■■□ 3,46
Scn1b-201ENSMUST00000098548 Npm2Q80W85 207 aa36,61■■■■□ 3,45
Scn1b-201ENSMUST00000098548 Setd1bQ8CFT2 1985 aa36,59■■■■□ 3,45
Scn1b-201ENSMUST00000098548 Rusc2Q80U22 1514 aa36,56■■■■□ 3,44
Scn1b-201ENSMUST00000098548 Rapgef2Q8CHG7 1496 aa36,55■■■■□ 3,44
Scn1b-201ENSMUST00000098548 Magi3Q9EQJ9 1476 aa36,5■■■■□ 3,43
Scn1b-201ENSMUST00000098548 Nup160Q9Z0W3 1402 aaKnown RBP36,5■■■■□ 3,43
Scn1b-201ENSMUST00000098548 Pbrm1Q8BSQ9 1634 aaKnown RBP36,5■■■■□ 3,43
Scn1b-201ENSMUST00000098548 Zeb1Q64318 1117 aa36,48■■■■□ 3,43
Scn1b-201ENSMUST00000098548 SynmQ70IV5 1561 aa36,48■■■■□ 3,43
Scn1b-201ENSMUST00000098548 Grin2aP35436 1464 aa36,44■■■■□ 3,42
Scn1b-201ENSMUST00000098548 Mroh2bQ7M6Y6 1581 aa36,4■■■■□ 3,42
Scn1b-201ENSMUST00000098548 Pla2r1Q62028 1487 aa36,37■■■■□ 3,41
Scn1b-201ENSMUST00000098548 Cc2d2bA0A286YDU8 1405 aa36,35■■■■□ 3,41
Scn1b-201ENSMUST00000098548 Arhgap35Q91YM2 1499 aa36,35■■■■□ 3,41
Scn1b-201ENSMUST00000098548 Cep162Q6ZQ06 1403 aa36,31■■■■□ 3,4
Scn1b-201ENSMUST00000098548 Eif4g1Q6NZJ6 1600 aaKnown RBP36,3■■■■□ 3,4
Scn1b-201ENSMUST00000098548 AqrQ8CFQ3 1481 aaKnown RBP36,2■■■■□ 3,39
Scn1b-201ENSMUST00000098548 Map3k1P53349 1493 aa36,18■■■■□ 3,38
Scn1b-201ENSMUST00000098548 Gpatch8A2A6A1 1505 aa36,18■■■■□ 3,38
Scn1b-201ENSMUST00000098548 Myt1lP97500 1187 aa36,1■■■■□ 3,37
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