Protein–RNA interactions for Protein: Q3UWR2

Khdc1a, KH homology domain-containing protein 1A, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1aQ3UWR2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Khdc1aQ3UWR2 Gm25239-201ENSMUST00000174915 86 ntBASIC24.95■■□□□ 1.58
Khdc1aQ3UWR2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Khdc1aQ3UWR2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Khdc1aQ3UWR2 Psd-208ENSMUST00000224556 2034 ntBASIC23.97■■□□□ 1.43
Khdc1aQ3UWR2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Khdc1aQ3UWR2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Khdc1aQ3UWR2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Khdc1aQ3UWR2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Khdc1aQ3UWR2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Khdc1aQ3UWR2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Khdc1aQ3UWR2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Khdc1aQ3UWR2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Khdc1aQ3UWR2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Khdc1aQ3UWR2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.65■■□□□ 1.22
Khdc1aQ3UWR2 Gm15042-201ENSMUST00000120212 883 ntBASIC22.61■■□□□ 1.21
Khdc1aQ3UWR2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Khdc1aQ3UWR2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Khdc1aQ3UWR2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Khdc1aQ3UWR2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Khdc1aQ3UWR2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Khdc1aQ3UWR2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Khdc1aQ3UWR2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Khdc1aQ3UWR2 Gm15045-201ENSMUST00000117359 883 ntBASIC22.18■■□□□ 1.14
Khdc1aQ3UWR2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Khdc1aQ3UWR2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Khdc1aQ3UWR2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Khdc1aQ3UWR2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Khdc1aQ3UWR2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Khdc1aQ3UWR2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Khdc1aQ3UWR2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.91■■□□□ 1.1
Khdc1aQ3UWR2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Khdc1aQ3UWR2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.89■■□□□ 1.09
Khdc1aQ3UWR2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.89■■□□□ 1.09
Khdc1aQ3UWR2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Khdc1aQ3UWR2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Khdc1aQ3UWR2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Khdc1aQ3UWR2 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.73■■□□□ 1.07
Khdc1aQ3UWR2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Khdc1aQ3UWR2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Khdc1aQ3UWR2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Khdc1aQ3UWR2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Khdc1aQ3UWR2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Khdc1aQ3UWR2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Khdc1aQ3UWR2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.55■■□□□ 1.04
Khdc1aQ3UWR2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.55■■□□□ 1.04
Khdc1aQ3UWR2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Khdc1aQ3UWR2 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.46■■□□□ 1.03
Khdc1aQ3UWR2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Khdc1aQ3UWR2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Khdc1aQ3UWR2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Khdc1aQ3UWR2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Khdc1aQ3UWR2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Khdc1aQ3UWR2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Khdc1aQ3UWR2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Khdc1aQ3UWR2 Gm24109-201ENSMUST00000175489 103 ntBASIC21.21■□□□□ 0.99
Khdc1aQ3UWR2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Khdc1aQ3UWR2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Khdc1aQ3UWR2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Khdc1aQ3UWR2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Khdc1aQ3UWR2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.04■□□□□ 0.96
Khdc1aQ3UWR2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc1aQ3UWR2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Khdc1aQ3UWR2 Gm23366-201ENSMUST00000175022 89 ntBASIC21■□□□□ 0.95
Khdc1aQ3UWR2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Khdc1aQ3UWR2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Khdc1aQ3UWR2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Khdc1aQ3UWR2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Khdc1aQ3UWR2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Khdc1aQ3UWR2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Khdc1aQ3UWR2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdc1aQ3UWR2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Khdc1aQ3UWR2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc1aQ3UWR2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Khdc1aQ3UWR2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Khdc1aQ3UWR2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdc1aQ3UWR2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.79■□□□□ 0.92
Khdc1aQ3UWR2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Khdc1aQ3UWR2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Khdc1aQ3UWR2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Khdc1aQ3UWR2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Khdc1aQ3UWR2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Khdc1aQ3UWR2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Khdc1aQ3UWR2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Khdc1aQ3UWR2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Khdc1aQ3UWR2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Khdc1aQ3UWR2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc1aQ3UWR2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc1aQ3UWR2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc1aQ3UWR2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Khdc1aQ3UWR2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Khdc1aQ3UWR2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Khdc1aQ3UWR2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc1aQ3UWR2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Khdc1aQ3UWR2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc1aQ3UWR2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.39■□□□□ 0.86
Khdc1aQ3UWR2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Khdc1aQ3UWR2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc1aQ3UWR2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc1aQ3UWR2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms