Protein–RNA interactions for Protein: A0A0A6YVS4

Ighv5-9-1, Immunoglobulin heavy variable 5-9-1 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv5-9-1A0A0A6YVS4 Gm25239-201ENSMUST00000174915 86 ntBASIC27.49■■□□□ 1.99
Ighv5-9-1A0A0A6YVS4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ighv5-9-1A0A0A6YVS4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ighv5-9-1A0A0A6YVS4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ighv5-9-1A0A0A6YVS4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ighv5-9-1A0A0A6YVS4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Ighv5-9-1A0A0A6YVS4 Gm15042-201ENSMUST00000120212 883 ntBASIC24.43■■□□□ 1.5
Ighv5-9-1A0A0A6YVS4 Gm15045-201ENSMUST00000117359 883 ntBASIC23.9■■□□□ 1.42
Ighv5-9-1A0A0A6YVS4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ighv5-9-1A0A0A6YVS4 Gm24109-201ENSMUST00000175489 103 ntBASIC23.62■■□□□ 1.37
Ighv5-9-1A0A0A6YVS4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ighv5-9-1A0A0A6YVS4 Psd-208ENSMUST00000224556 2034 ntBASIC23.56■■□□□ 1.36
Ighv5-9-1A0A0A6YVS4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.34■■□□□ 1.33
Ighv5-9-1A0A0A6YVS4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ighv5-9-1A0A0A6YVS4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ighv5-9-1A0A0A6YVS4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ighv5-9-1A0A0A6YVS4 Gm23366-201ENSMUST00000175022 89 ntBASIC23.07■■□□□ 1.28
Ighv5-9-1A0A0A6YVS4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ighv5-9-1A0A0A6YVS4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv5-9-1A0A0A6YVS4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ighv5-9-1A0A0A6YVS4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ighv5-9-1A0A0A6YVS4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ighv5-9-1A0A0A6YVS4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ighv5-9-1A0A0A6YVS4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ighv5-9-1A0A0A6YVS4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ighv5-9-1A0A0A6YVS4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ighv5-9-1A0A0A6YVS4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.77■■□□□ 1.24
Ighv5-9-1A0A0A6YVS4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ighv5-9-1A0A0A6YVS4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ighv5-9-1A0A0A6YVS4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ighv5-9-1A0A0A6YVS4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.52■■□□□ 1.2
Ighv5-9-1A0A0A6YVS4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Ighv5-9-1A0A0A6YVS4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.41■■□□□ 1.18
Ighv5-9-1A0A0A6YVS4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv5-9-1A0A0A6YVS4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ighv5-9-1A0A0A6YVS4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ighv5-9-1A0A0A6YVS4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ighv5-9-1A0A0A6YVS4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.17■■□□□ 1.14
Ighv5-9-1A0A0A6YVS4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ighv5-9-1A0A0A6YVS4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ighv5-9-1A0A0A6YVS4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv5-9-1A0A0A6YVS4 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.86■■□□□ 1.09
Ighv5-9-1A0A0A6YVS4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ighv5-9-1A0A0A6YVS4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ighv5-9-1A0A0A6YVS4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.81■■□□□ 1.08
Ighv5-9-1A0A0A6YVS4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.81■■□□□ 1.08
Ighv5-9-1A0A0A6YVS4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ighv5-9-1A0A0A6YVS4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv5-9-1A0A0A6YVS4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ighv5-9-1A0A0A6YVS4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv5-9-1A0A0A6YVS4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv5-9-1A0A0A6YVS4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Ighv5-9-1A0A0A6YVS4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ighv5-9-1A0A0A6YVS4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ighv5-9-1A0A0A6YVS4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv5-9-1A0A0A6YVS4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv5-9-1A0A0A6YVS4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.59■■□□□ 1.05
Ighv5-9-1A0A0A6YVS4 Gm25238-201ENSMUST00000174914 89 ntBASIC21.54■■□□□ 1.04
Ighv5-9-1A0A0A6YVS4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv5-9-1A0A0A6YVS4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv5-9-1A0A0A6YVS4 Gm27325-201ENSMUST00000175467 74 ntBASIC21.46■■□□□ 1.03
Ighv5-9-1A0A0A6YVS4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ighv5-9-1A0A0A6YVS4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ighv5-9-1A0A0A6YVS4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Ighv5-9-1A0A0A6YVS4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.41■■□□□ 1.02
Ighv5-9-1A0A0A6YVS4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.41■■□□□ 1.02
Ighv5-9-1A0A0A6YVS4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv5-9-1A0A0A6YVS4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv5-9-1A0A0A6YVS4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.34■■□□□ 1.01
Ighv5-9-1A0A0A6YVS4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ighv5-9-1A0A0A6YVS4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv5-9-1A0A0A6YVS4 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.27■■□□□ 1
Ighv5-9-1A0A0A6YVS4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv5-9-1A0A0A6YVS4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Ighv5-9-1A0A0A6YVS4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv5-9-1A0A0A6YVS4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.06■□□□□ 0.96
Ighv5-9-1A0A0A6YVS4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.06■□□□□ 0.96
Ighv5-9-1A0A0A6YVS4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv5-9-1A0A0A6YVS4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv5-9-1A0A0A6YVS4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv5-9-1A0A0A6YVS4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv5-9-1A0A0A6YVS4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv5-9-1A0A0A6YVS4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.98■□□□□ 0.95
Ighv5-9-1A0A0A6YVS4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv5-9-1A0A0A6YVS4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv5-9-1A0A0A6YVS4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv5-9-1A0A0A6YVS4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.9■□□□□ 0.94
Ighv5-9-1A0A0A6YVS4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv5-9-1A0A0A6YVS4 Rab21-202ENSMUST00000218831 843 ntBASIC20.86■□□□□ 0.93
Ighv5-9-1A0A0A6YVS4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ighv5-9-1A0A0A6YVS4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ighv5-9-1A0A0A6YVS4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ighv5-9-1A0A0A6YVS4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv5-9-1A0A0A6YVS4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv5-9-1A0A0A6YVS4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ighv5-9-1A0A0A6YVS4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.75■□□□□ 0.91
Ighv5-9-1A0A0A6YVS4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv5-9-1A0A0A6YVS4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv5-9-1A0A0A6YVS4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.73■□□□□ 0.91
Ighv5-9-1A0A0A6YVS4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms