Protein–RNA interactions for Protein: A0A0A6YVS4

Ighv5-9-1, Immunoglobulin heavy variable 5-9-1 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv5-9-1A0A0A6YVS4 Gm25239-201ENSMUST00000174915 86 ntBASIC27,49■■□□□ 1,99
Ighv5-9-1A0A0A6YVS4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Ighv5-9-1A0A0A6YVS4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25,23■■□□□ 1,63
Ighv5-9-1A0A0A6YVS4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1,59
Ighv5-9-1A0A0A6YVS4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,82■■□□□ 1,56
Ighv5-9-1A0A0A6YVS4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24,63■■□□□ 1,53
Ighv5-9-1A0A0A6YVS4 Gm15042-201ENSMUST00000120212 883 ntBASIC24,43■■□□□ 1,5
Ighv5-9-1A0A0A6YVS4 Gm15045-201ENSMUST00000117359 883 ntBASIC23,9■■□□□ 1,42
Ighv5-9-1A0A0A6YVS4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,78■■□□□ 1,4
Ighv5-9-1A0A0A6YVS4 Gm24109-201ENSMUST00000175489 103 ntBASIC23,62■■□□□ 1,37
Ighv5-9-1A0A0A6YVS4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,58■■□□□ 1,37
Ighv5-9-1A0A0A6YVS4 Psd-208ENSMUST00000224556 2034 ntBASIC23,56■■□□□ 1,36
Ighv5-9-1A0A0A6YVS4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23,34■■□□□ 1,33
Ighv5-9-1A0A0A6YVS4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23,32■■□□□ 1,32
Ighv5-9-1A0A0A6YVS4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23,3■■□□□ 1,32
Ighv5-9-1A0A0A6YVS4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,19■■□□□ 1,3
Ighv5-9-1A0A0A6YVS4 Gm23366-201ENSMUST00000175022 89 ntBASIC23,07■■□□□ 1,28
Ighv5-9-1A0A0A6YVS4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23,06■■□□□ 1,28
Ighv5-9-1A0A0A6YVS4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,98■■□□□ 1,27
Ighv5-9-1A0A0A6YVS4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Ighv5-9-1A0A0A6YVS4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,9■■□□□ 1,26
Ighv5-9-1A0A0A6YVS4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,9■■□□□ 1,26
Ighv5-9-1A0A0A6YVS4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22,88■■□□□ 1,25
Ighv5-9-1A0A0A6YVS4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ighv5-9-1A0A0A6YVS4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ighv5-9-1A0A0A6YVS4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
Ighv5-9-1A0A0A6YVS4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22,77■■□□□ 1,24
Ighv5-9-1A0A0A6YVS4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Ighv5-9-1A0A0A6YVS4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Ighv5-9-1A0A0A6YVS4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22,58■■□□□ 1,21
Ighv5-9-1A0A0A6YVS4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22,52■■□□□ 1,2
Ighv5-9-1A0A0A6YVS4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22,49■■□□□ 1,19
Ighv5-9-1A0A0A6YVS4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22,41■■□□□ 1,18
Ighv5-9-1A0A0A6YVS4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22,4■■□□□ 1,18
Ighv5-9-1A0A0A6YVS4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22,29■■□□□ 1,16
Ighv5-9-1A0A0A6YVS4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22,25■■□□□ 1,15
Ighv5-9-1A0A0A6YVS4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22,22■■□□□ 1,15
Ighv5-9-1A0A0A6YVS4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,17■■□□□ 1,14
Ighv5-9-1A0A0A6YVS4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22,07■■□□□ 1,12
Ighv5-9-1A0A0A6YVS4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
Ighv5-9-1A0A0A6YVS4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21,97■■□□□ 1,11
Ighv5-9-1A0A0A6YVS4 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,86■■□□□ 1,09
Ighv5-9-1A0A0A6YVS4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,83■■□□□ 1,09
Ighv5-9-1A0A0A6YVS4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21,83■■□□□ 1,08
Ighv5-9-1A0A0A6YVS4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21,81■■□□□ 1,08
Ighv5-9-1A0A0A6YVS4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21,81■■□□□ 1,08
Ighv5-9-1A0A0A6YVS4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21,81■■□□□ 1,08
Ighv5-9-1A0A0A6YVS4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21,75■■□□□ 1,07
Ighv5-9-1A0A0A6YVS4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21,73■■□□□ 1,07
Ighv5-9-1A0A0A6YVS4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,65■■□□□ 1,06
Ighv5-9-1A0A0A6YVS4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21,65■■□□□ 1,06
Ighv5-9-1A0A0A6YVS4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,64■■□□□ 1,05
Ighv5-9-1A0A0A6YVS4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21,64■■□□□ 1,05
Ighv5-9-1A0A0A6YVS4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21,62■■□□□ 1,05
Ighv5-9-1A0A0A6YVS4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21,61■■□□□ 1,05
Ighv5-9-1A0A0A6YVS4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Ighv5-9-1A0A0A6YVS4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21,59■■□□□ 1,05
Ighv5-9-1A0A0A6YVS4 Gm25238-201ENSMUST00000174914 89 ntBASIC21,54■■□□□ 1,04
Ighv5-9-1A0A0A6YVS4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21,49■■□□□ 1,03
Ighv5-9-1A0A0A6YVS4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,49■■□□□ 1,03
Ighv5-9-1A0A0A6YVS4 Gm27325-201ENSMUST00000175467 74 ntBASIC21,46■■□□□ 1,03
Ighv5-9-1A0A0A6YVS4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Ighv5-9-1A0A0A6YVS4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21,43■■□□□ 1,02
Ighv5-9-1A0A0A6YVS4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21,42■■□□□ 1,02
Ighv5-9-1A0A0A6YVS4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21,41■■□□□ 1,02
Ighv5-9-1A0A0A6YVS4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21,41■■□□□ 1,02
Ighv5-9-1A0A0A6YVS4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Ighv5-9-1A0A0A6YVS4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21,38■■□□□ 1,01
Ighv5-9-1A0A0A6YVS4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21,34■■□□□ 1,01
Ighv5-9-1A0A0A6YVS4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21,32■■□□□ 1
Ighv5-9-1A0A0A6YVS4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21,28■■□□□ 1
Ighv5-9-1A0A0A6YVS4 Gm42596-201ENSMUST00000196305 1958 ntBASIC21,27■■□□□ 1
Ighv5-9-1A0A0A6YVS4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21,26■□□□□ 0,99
Ighv5-9-1A0A0A6YVS4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21,24■□□□□ 0,99
Ighv5-9-1A0A0A6YVS4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Ighv5-9-1A0A0A6YVS4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21,06■□□□□ 0,96
Ighv5-9-1A0A0A6YVS4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21,06■□□□□ 0,96
Ighv5-9-1A0A0A6YVS4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21,06■□□□□ 0,96
Ighv5-9-1A0A0A6YVS4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21,02■□□□□ 0,96
Ighv5-9-1A0A0A6YVS4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Ighv5-9-1A0A0A6YVS4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20,99■□□□□ 0,95
Ighv5-9-1A0A0A6YVS4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20,99■□□□□ 0,95
Ighv5-9-1A0A0A6YVS4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20,98■□□□□ 0,95
Ighv5-9-1A0A0A6YVS4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20,98■□□□□ 0,95
Ighv5-9-1A0A0A6YVS4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20,97■□□□□ 0,95
Ighv5-9-1A0A0A6YVS4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20,92■□□□□ 0,94
Ighv5-9-1A0A0A6YVS4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20,9■□□□□ 0,94
Ighv5-9-1A0A0A6YVS4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20,87■□□□□ 0,93
Ighv5-9-1A0A0A6YVS4 Rab21-202ENSMUST00000218831 843 ntBASIC20,86■□□□□ 0,93
Ighv5-9-1A0A0A6YVS4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,93
Ighv5-9-1A0A0A6YVS4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20,82■□□□□ 0,92
Ighv5-9-1A0A0A6YVS4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20,8■□□□□ 0,92
Ighv5-9-1A0A0A6YVS4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20,79■□□□□ 0,92
Ighv5-9-1A0A0A6YVS4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20,79■□□□□ 0,92
Ighv5-9-1A0A0A6YVS4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20,78■□□□□ 0,92
Ighv5-9-1A0A0A6YVS4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20,75■□□□□ 0,91
Ighv5-9-1A0A0A6YVS4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20,75■□□□□ 0,91
Ighv5-9-1A0A0A6YVS4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20,74■□□□□ 0,91
Ighv5-9-1A0A0A6YVS4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20,73■□□□□ 0,91
Ighv5-9-1A0A0A6YVS4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20,71■□□□□ 0,91
Retrieved 100 of 76,532 protein–RNA pairs in 12,2 ms