Protein–RNA interactions for Protein: O88676

Mmp23, Matrix metalloproteinase-23, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp23O88676 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Mmp23O88676 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp23O88676 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Mmp23O88676 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Mmp23O88676 Psd-208ENSMUST00000224556 2034 ntBASIC24.51■■□□□ 1.51
Mmp23O88676 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Mmp23O88676 Gm25239-201ENSMUST00000174915 86 ntBASIC24.06■■□□□ 1.44
Mmp23O88676 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Mmp23O88676 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Mmp23O88676 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Mmp23O88676 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Mmp23O88676 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Mmp23O88676 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Mmp23O88676 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp23O88676 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp23O88676 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Mmp23O88676 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Mmp23O88676 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Mmp23O88676 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Mmp23O88676 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Mmp23O88676 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Mmp23O88676 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.62■■□□□ 1.21
Mmp23O88676 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Mmp23O88676 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Mmp23O88676 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Mmp23O88676 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.18■■□□□ 1.14
Mmp23O88676 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp23O88676 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.14■■□□□ 1.13
Mmp23O88676 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp23O88676 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.03■■□□□ 1.12
Mmp23O88676 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Mmp23O88676 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Mmp23O88676 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Mmp23O88676 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Mmp23O88676 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Mmp23O88676 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Mmp23O88676 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Mmp23O88676 Gm15042-201ENSMUST00000120212 883 ntBASIC21.84■■□□□ 1.09
Mmp23O88676 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Mmp23O88676 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Mmp23O88676 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp23O88676 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Mmp23O88676 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Mmp23O88676 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Mmp23O88676 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mmp23O88676 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mmp23O88676 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.52■■□□□ 1.03
Mmp23O88676 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mmp23O88676 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp23O88676 Gm15045-201ENSMUST00000117359 883 ntBASIC21.47■■□□□ 1.03
Mmp23O88676 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mmp23O88676 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp23O88676 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp23O88676 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp23O88676 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp23O88676 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp23O88676 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.36■■□□□ 1.01
Mmp23O88676 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.36■■□□□ 1.01
Mmp23O88676 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp23O88676 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp23O88676 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Mmp23O88676 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.32■■□□□ 1
Mmp23O88676 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.31■■□□□ 1
Mmp23O88676 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp23O88676 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.28■■□□□ 1
Mmp23O88676 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Mmp23O88676 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp23O88676 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp23O88676 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Mmp23O88676 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp23O88676 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp23O88676 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp23O88676 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Mmp23O88676 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp23O88676 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp23O88676 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.98■□□□□ 0.95
Mmp23O88676 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp23O88676 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp23O88676 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp23O88676 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp23O88676 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp23O88676 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp23O88676 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp23O88676 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Mmp23O88676 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp23O88676 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Mmp23O88676 Zxda-201ENSMUST00000117281 2621 ntBASIC20.73■□□□□ 0.91
Mmp23O88676 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp23O88676 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp23O88676 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp23O88676 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp23O88676 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Mmp23O88676 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mmp23O88676 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp23O88676 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp23O88676 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp23O88676 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.61■□□□□ 0.89
Mmp23O88676 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp23O88676 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp23O88676 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 7.1 ms