Protein–RNA interactions for Protein: Q8VCG9

Rfxap, Regulatory factor X-associated protein, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfxapQ8VCG9 Gm25239-201ENSMUST00000174915 86 ntBASIC28,06■■■□□ 2,08
RfxapQ8VCG9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26,15■■□□□ 1,78
RfxapQ8VCG9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
RfxapQ8VCG9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25,98■■□□□ 1,75
RfxapQ8VCG9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
RfxapQ8VCG9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
RfxapQ8VCG9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24,99■■□□□ 1,59
RfxapQ8VCG9 Psd-208ENSMUST00000224556 2034 ntBASIC24,8■■□□□ 1,56
RfxapQ8VCG9 Gm24109-201ENSMUST00000175489 103 ntBASIC24,61■■□□□ 1,53
RfxapQ8VCG9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,61■■□□□ 1,53
RfxapQ8VCG9 Gm15042-201ENSMUST00000120212 883 ntBASIC24,12■■□□□ 1,45
RfxapQ8VCG9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24,01■■□□□ 1,43
RfxapQ8VCG9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,8■■□□□ 1,4
RfxapQ8VCG9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23,76■■□□□ 1,39
RfxapQ8VCG9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,72■■□□□ 1,39
RfxapQ8VCG9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,71■■□□□ 1,39
RfxapQ8VCG9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23,64■■□□□ 1,38
RfxapQ8VCG9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,61■■□□□ 1,37
RfxapQ8VCG9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,55■■□□□ 1,36
RfxapQ8VCG9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23,5■■□□□ 1,35
RfxapQ8VCG9 Gm23366-201ENSMUST00000175022 89 ntBASIC23,46■■□□□ 1,35
RfxapQ8VCG9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23,46■■□□□ 1,35
RfxapQ8VCG9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23,45■■□□□ 1,34
RfxapQ8VCG9 Gm15045-201ENSMUST00000117359 883 ntBASIC23,36■■□□□ 1,33
RfxapQ8VCG9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23,35■■□□□ 1,33
RfxapQ8VCG9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23,32■■□□□ 1,32
RfxapQ8VCG9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,3■■□□□ 1,32
RfxapQ8VCG9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23,29■■□□□ 1,32
RfxapQ8VCG9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23,24■■□□□ 1,31
RfxapQ8VCG9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23,16■■□□□ 1,3
RfxapQ8VCG9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,12■■□□□ 1,29
RfxapQ8VCG9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23,07■■□□□ 1,28
RfxapQ8VCG9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23,06■■□□□ 1,28
RfxapQ8VCG9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,98■■□□□ 1,27
RfxapQ8VCG9 Gm42596-201ENSMUST00000196305 1958 ntBASIC22,97■■□□□ 1,27
RfxapQ8VCG9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22,95■■□□□ 1,26
RfxapQ8VCG9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
RfxapQ8VCG9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
RfxapQ8VCG9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22,75■■□□□ 1,23
RfxapQ8VCG9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22,73■■□□□ 1,23
RfxapQ8VCG9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,68■■□□□ 1,22
RfxapQ8VCG9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,67■■□□□ 1,22
RfxapQ8VCG9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22,65■■□□□ 1,22
RfxapQ8VCG9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,61■■□□□ 1,21
RfxapQ8VCG9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22,61■■□□□ 1,21
RfxapQ8VCG9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22,52■■□□□ 1,2
RfxapQ8VCG9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,49■■□□□ 1,19
RfxapQ8VCG9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,45■■□□□ 1,19
RfxapQ8VCG9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22,45■■□□□ 1,18
RfxapQ8VCG9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22,39■■□□□ 1,18
RfxapQ8VCG9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
RfxapQ8VCG9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
RfxapQ8VCG9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22,27■■□□□ 1,16
RfxapQ8VCG9 Gm25238-201ENSMUST00000174914 89 ntBASIC22,23■■□□□ 1,15
RfxapQ8VCG9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22,21■■□□□ 1,15
RfxapQ8VCG9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,2■■□□□ 1,14
RfxapQ8VCG9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
RfxapQ8VCG9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,14■■□□□ 1,14
RfxapQ8VCG9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,13■■□□□ 1,13
RfxapQ8VCG9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22,09■■□□□ 1,13
RfxapQ8VCG9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,02■■□□□ 1,12
RfxapQ8VCG9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22,01■■□□□ 1,11
RfxapQ8VCG9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
RfxapQ8VCG9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21,97■■□□□ 1,11
RfxapQ8VCG9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,96■■□□□ 1,11
RfxapQ8VCG9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21,94■■□□□ 1,1
RfxapQ8VCG9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21,92■■□□□ 1,1
RfxapQ8VCG9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21,91■■□□□ 1,1
RfxapQ8VCG9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21,88■■□□□ 1,09
RfxapQ8VCG9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21,87■■□□□ 1,09
RfxapQ8VCG9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21,87■■□□□ 1,09
RfxapQ8VCG9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21,85■■□□□ 1,09
RfxapQ8VCG9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21,85■■□□□ 1,09
RfxapQ8VCG9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21,85■■□□□ 1,09
RfxapQ8VCG9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21,78■■□□□ 1,08
RfxapQ8VCG9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21,71■■□□□ 1,07
RfxapQ8VCG9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21,69■■□□□ 1,06
RfxapQ8VCG9 Gm25262-201ENSMUST00000174934 133 ntBASIC21,69■■□□□ 1,06
RfxapQ8VCG9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21,69■■□□□ 1,06
RfxapQ8VCG9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21,68■■□□□ 1,06
RfxapQ8VCG9 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,65■■□□□ 1,06
RfxapQ8VCG9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21,64■■□□□ 1,05
RfxapQ8VCG9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21,63■■□□□ 1,05
RfxapQ8VCG9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21,62■■□□□ 1,05
RfxapQ8VCG9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21,62■■□□□ 1,05
RfxapQ8VCG9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21,62■■□□□ 1,05
RfxapQ8VCG9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,58■■□□□ 1,05
RfxapQ8VCG9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21,56■■□□□ 1,04
RfxapQ8VCG9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21,54■■□□□ 1,04
RfxapQ8VCG9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21,53■■□□□ 1,04
RfxapQ8VCG9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21,51■■□□□ 1,03
RfxapQ8VCG9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21,48■■□□□ 1,03
RfxapQ8VCG9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21,48■■□□□ 1,03
RfxapQ8VCG9 Zxda-201ENSMUST00000117281 2621 ntBASIC21,47■■□□□ 1,03
RfxapQ8VCG9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
RfxapQ8VCG9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
RfxapQ8VCG9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
RfxapQ8VCG9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21,39■■□□□ 1,01
RfxapQ8VCG9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
RfxapQ8VCG9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21,36■■□□□ 1,01
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms