RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Ighv1-16A0A075B5U1 98 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Vmn1r119E9Q4H3 307 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Itgb1bp1O35671 200 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Cdpf1Q8R3A2 119 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Fbxl15Q91W61 300 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Hcfc2Q9D968 241 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Igkv20-101-2A0A0G2JDU3 113 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Erdr1J3QMM0 206 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Ly86O88188 162 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Spcs1Q9D958 161 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Trav19A0A0B4J1K4 119 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Znf664Q4VA44 261 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Ighv1-4A0A075B5T4 117 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Tcrg-V4A0A0B4J1J8 138 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Gm10553J3QPF1 123 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Zfp248Q640N4 576 aa10.48□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Trav7-5A0A0G2JFX6 112 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Gm28044L7N1X0 119 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 P06334 169 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Olfr1535Q7TQU0 326 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Immp2lQ8BPT6 175 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Muc15Q8C6Z1 331 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Olfr1195Q8VG21 308 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Tmem89Q9DA04 169 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Fam213bQ9DB60 201 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Gm5089A1L3C8 106 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Hoxb4P10284 250 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Lypd1Q8BLC3 141 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Gtf2h5Q8K2X8 71 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Dpm3Q9D1Q4 92 aa10.47□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Tnfsf15Q5UBV8 252 aa10.46□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Clec4b2Q67DU8 208 aa10.46□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Nrn1Q8CFV4 142 aa10.46□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Hyls1Q9CXX0 307 aa10.46□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Ccl24Q9JKC0 119 aa10.46□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Prrc2cQ3TLH4 2846 aaKnown RBP10.46□□□□□ -0.73
Clcn3-204ENSMUST00000110301 Mmp23O88676 391 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Slc25a48Q8BW66 306 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Ammecr1lQ8JZZ6 310 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Fmc1Q9CR13 113 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 FryE9Q8I9 3020 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Ighv1-39A0A075B5V5 117 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gm12169F2Z474 250 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gm5294J3QP53 216 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Pde6hP61249 83 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Zfand3Q497H0 227 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Mrpl36Q99N90 102 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Obox1Q9D350 204 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Col5a1O88207 1838 aa10.46□□□□□ -0.74
Clcn3-204ENSMUST00000110301 P01728 117 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Pfn1P62962 140 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gm29644A0A087WPG2 191 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Esp4A8R0T8 117 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Psmg4P0C7N9 123 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Cox6b1P56391 86 aaKnown RBP10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gm6040Q4QY32 63 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Q5BN45 167 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Ighv14-1A0A075B5R4 117 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Ighv8-4A0A0A6YW26 117 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Sap30O88574 220 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 P01802 115 aa10.45□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Igkv4-81A0A0G2JEY5 119 aa10.44□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Vmn1r216Q8R257 298 aa10.44□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gm45753A0A1C7CYU8 86 aa10.44□□□□□ -0.74
Clcn3-204ENSMUST00000110301 LfngO09010 378 aa10.44□□□□□ -0.74
Clcn3-204ENSMUST00000110301 H1fxQ80ZM5 188 aa10.44□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gm26558Q8BLW8 286 aa10.44□□□□□ -0.74
Clcn3-204ENSMUST00000110301 KprpB2RUR4 657 aa10.44□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gata4Q08369 441 aa10.44□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Ang5Q5GAN1 145 aa10.44□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Fam162bQ9CX19 157 aa10.44□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gm2564F6Z9S8 108 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Ccl19O70460 108 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 P04944 107 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Zfp36l1P23950 338 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Klk7Q91VE3 249 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gkn1Q9CR36 201 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Psmg3Q9CZH3 122 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 CcsQ9WU84 274 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Samd10Q7TST3 202 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Tnfrsf23Q9ER63 176 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Dmxl2Q8BPN8 3032 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Mlst8Q9DCJ1 326 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 SpegQ62407 3262 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Rnf212F6TQD1 307 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Saa3P04918 122 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Edn2P22389 175 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Defa6P50704 93 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Tmem170bP86050 132 aa10.43□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Trav14n-3A0A075B645 120 aa10.42□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Scgb1b11A0A087WQJ0 93 aa10.42□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Defa35E9QLQ1 93 aa10.42□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gm10130F6ZHM5 101 aa10.42□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Igkv4-57A0A0A6YYE7 117 aa10.42□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Gm7849D3YX03 116 aa10.42□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Trappc1Q5NCF2 145 aa10.42□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Jpt2Q6PGH2 190 aaKnown RBP10.42□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Ighv1-9A0A0A6YW37 117 aa10.42□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Pmis2Q497Q9 96 aa10.42□□□□□ -0.74
Clcn3-204ENSMUST00000110301 Olfr149Q60888 311 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 66.9 ms