Protein–RNA interactions for Protein: Q8R257

Vmn1r216, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r216Q8R257 Gm25239-201ENSMUST00000174915 86 ntBASIC27,56■■■□□ 2
Vmn1r216Q8R257 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25,41■■□□□ 1,66
Vmn1r216Q8R257 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Vmn1r216Q8R257 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25,1■■□□□ 1,61
Vmn1r216Q8R257 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,52■■□□□ 1,52
Vmn1r216Q8R257 Gm15042-201ENSMUST00000120212 883 ntBASIC24,3■■□□□ 1,48
Vmn1r216Q8R257 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24,23■■□□□ 1,47
Vmn1r216Q8R257 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Vmn1r216Q8R257 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1,43
Vmn1r216Q8R257 Psd-208ENSMUST00000224556 2034 ntBASIC23,88■■□□□ 1,41
Vmn1r216Q8R257 Gm24109-201ENSMUST00000175489 103 ntBASIC23,77■■□□□ 1,4
Vmn1r216Q8R257 Gm15045-201ENSMUST00000117359 883 ntBASIC23,72■■□□□ 1,39
Vmn1r216Q8R257 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,55■■□□□ 1,36
Vmn1r216Q8R257 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,22■■□□□ 1,31
Vmn1r216Q8R257 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,2■■□□□ 1,3
Vmn1r216Q8R257 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23,18■■□□□ 1,3
Vmn1r216Q8R257 Gm23366-201ENSMUST00000175022 89 ntBASIC23,08■■□□□ 1,29
Vmn1r216Q8R257 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,92■■□□□ 1,26
Vmn1r216Q8R257 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22,87■■□□□ 1,25
Vmn1r216Q8R257 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22,72■■□□□ 1,23
Vmn1r216Q8R257 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Vmn1r216Q8R257 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22,68■■□□□ 1,22
Vmn1r216Q8R257 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22,67■■□□□ 1,22
Vmn1r216Q8R257 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,66■■□□□ 1,22
Vmn1r216Q8R257 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22,62■■□□□ 1,21
Vmn1r216Q8R257 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22,59■■□□□ 1,21
Vmn1r216Q8R257 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,57■■□□□ 1,2
Vmn1r216Q8R257 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,56■■□□□ 1,2
Vmn1r216Q8R257 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,51■■□□□ 1,19
Vmn1r216Q8R257 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,5■■□□□ 1,19
Vmn1r216Q8R257 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22,5■■□□□ 1,19
Vmn1r216Q8R257 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22,48■■□□□ 1,19
Vmn1r216Q8R257 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22,43■■□□□ 1,18
Vmn1r216Q8R257 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22,37■■□□□ 1,17
Vmn1r216Q8R257 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Vmn1r216Q8R257 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Vmn1r216Q8R257 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22,33■■□□□ 1,16
Vmn1r216Q8R257 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22,32■■□□□ 1,16
Vmn1r216Q8R257 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22,26■■□□□ 1,15
Vmn1r216Q8R257 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22,19■■□□□ 1,14
Vmn1r216Q8R257 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,19■■□□□ 1,14
Vmn1r216Q8R257 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22,02■■□□□ 1,12
Vmn1r216Q8R257 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22■■□□□ 1,11
Vmn1r216Q8R257 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21,96■■□□□ 1,11
Vmn1r216Q8R257 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,91■■□□□ 1,1
Vmn1r216Q8R257 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21,91■■□□□ 1,1
Vmn1r216Q8R257 Gm42596-201ENSMUST00000196305 1958 ntBASIC21,89■■□□□ 1,09
Vmn1r216Q8R257 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,89■■□□□ 1,09
Vmn1r216Q8R257 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21,79■■□□□ 1,08
Vmn1r216Q8R257 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21,74■■□□□ 1,07
Vmn1r216Q8R257 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21,74■■□□□ 1,07
Vmn1r216Q8R257 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,7■■□□□ 1,06
Vmn1r216Q8R257 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21,69■■□□□ 1,06
Vmn1r216Q8R257 Gm25238-201ENSMUST00000174914 89 ntBASIC21,65■■□□□ 1,06
Vmn1r216Q8R257 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21,62■■□□□ 1,05
Vmn1r216Q8R257 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,62■■□□□ 1,05
Vmn1r216Q8R257 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,61■■□□□ 1,05
Vmn1r216Q8R257 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21,61■■□□□ 1,05
Vmn1r216Q8R257 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21,56■■□□□ 1,04
Vmn1r216Q8R257 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21,52■■□□□ 1,04
Vmn1r216Q8R257 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21,51■■□□□ 1,03
Vmn1r216Q8R257 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Vmn1r216Q8R257 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21,5■■□□□ 1,03
Vmn1r216Q8R257 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Vmn1r216Q8R257 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Vmn1r216Q8R257 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Vmn1r216Q8R257 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21,33■■□□□ 1,01
Vmn1r216Q8R257 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,32■■□□□ 1
Vmn1r216Q8R257 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21,3■■□□□ 1
Vmn1r216Q8R257 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21,29■■□□□ 1
Vmn1r216Q8R257 Gm27325-201ENSMUST00000175467 74 ntBASIC21,29■■□□□ 1
Vmn1r216Q8R257 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,29■■□□□ 1
Vmn1r216Q8R257 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21,27■■□□□ 1
Vmn1r216Q8R257 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,24■□□□□ 0,99
Vmn1r216Q8R257 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,2■□□□□ 0,98
Vmn1r216Q8R257 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21,2■□□□□ 0,98
Vmn1r216Q8R257 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21,17■□□□□ 0,98
Vmn1r216Q8R257 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Vmn1r216Q8R257 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21,13■□□□□ 0,97
Vmn1r216Q8R257 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Vmn1r216Q8R257 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21,05■□□□□ 0,96
Vmn1r216Q8R257 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21,05■□□□□ 0,96
Vmn1r216Q8R257 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,04■□□□□ 0,96
Vmn1r216Q8R257 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21,04■□□□□ 0,96
Vmn1r216Q8R257 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21,03■□□□□ 0,96
Vmn1r216Q8R257 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21,03■□□□□ 0,96
Vmn1r216Q8R257 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21,02■□□□□ 0,96
Vmn1r216Q8R257 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21,02■□□□□ 0,96
Vmn1r216Q8R257 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0,95
Vmn1r216Q8R257 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21■□□□□ 0,95
Vmn1r216Q8R257 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20,95■□□□□ 0,94
Vmn1r216Q8R257 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20,94■□□□□ 0,94
Vmn1r216Q8R257 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,94■□□□□ 0,94
Vmn1r216Q8R257 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,92■□□□□ 0,94
Vmn1r216Q8R257 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,88■□□□□ 0,93
Vmn1r216Q8R257 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20,87■□□□□ 0,93
Vmn1r216Q8R257 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,86■□□□□ 0,93
Vmn1r216Q8R257 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20,82■□□□□ 0,92
Vmn1r216Q8R257 Rab21-202ENSMUST00000218831 843 ntBASIC20,81■□□□□ 0,92
Vmn1r216Q8R257 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20,81■□□□□ 0,92
Retrieved 100 of 76,532 protein–RNA pairs in 16,2 ms