Protein–RNA interactions for Protein: A0A0A6YW26

Ighv8-4, Immunoglobulin heavy variable V8-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-4A0A0A6YW26 Gm25239-201ENSMUST00000174915 86 ntBASIC27,12■■□□□ 1,93
Ighv8-4A0A0A6YW26 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Ighv8-4A0A0A6YW26 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25,05■■□□□ 1,6
Ighv8-4A0A0A6YW26 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24,75■■□□□ 1,55
Ighv8-4A0A0A6YW26 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,42■■□□□ 1,5
Ighv8-4A0A0A6YW26 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,41■■□□□ 1,5
Ighv8-4A0A0A6YW26 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24,26■■□□□ 1,47
Ighv8-4A0A0A6YW26 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23,88■■□□□ 1,41
Ighv8-4A0A0A6YW26 Gm15042-201ENSMUST00000120212 883 ntBASIC23,79■■□□□ 1,4
Ighv8-4A0A0A6YW26 Psd-208ENSMUST00000224556 2034 ntBASIC23,57■■□□□ 1,36
Ighv8-4A0A0A6YW26 Gm24109-201ENSMUST00000175489 103 ntBASIC23,44■■□□□ 1,34
Ighv8-4A0A0A6YW26 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,37■■□□□ 1,33
Ighv8-4A0A0A6YW26 Gm15045-201ENSMUST00000117359 883 ntBASIC23,23■■□□□ 1,31
Ighv8-4A0A0A6YW26 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,08■■□□□ 1,29
Ighv8-4A0A0A6YW26 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22,96■■□□□ 1,27
Ighv8-4A0A0A6YW26 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22,89■■□□□ 1,25
Ighv8-4A0A0A6YW26 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22,86■■□□□ 1,25
Ighv8-4A0A0A6YW26 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22,84■■□□□ 1,25
Ighv8-4A0A0A6YW26 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
Ighv8-4A0A0A6YW26 Gm23366-201ENSMUST00000175022 89 ntBASIC22,71■■□□□ 1,23
Ighv8-4A0A0A6YW26 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,56■■□□□ 1,2
Ighv8-4A0A0A6YW26 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,49■■□□□ 1,19
Ighv8-4A0A0A6YW26 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,49■■□□□ 1,19
Ighv8-4A0A0A6YW26 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22,49■■□□□ 1,19
Ighv8-4A0A0A6YW26 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22,49■■□□□ 1,19
Ighv8-4A0A0A6YW26 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22,42■■□□□ 1,18
Ighv8-4A0A0A6YW26 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,4■■□□□ 1,18
Ighv8-4A0A0A6YW26 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
Ighv8-4A0A0A6YW26 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
Ighv8-4A0A0A6YW26 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22,37■■□□□ 1,17
Ighv8-4A0A0A6YW26 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22,33■■□□□ 1,17
Ighv8-4A0A0A6YW26 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,32■■□□□ 1,16
Ighv8-4A0A0A6YW26 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,27■■□□□ 1,16
Ighv8-4A0A0A6YW26 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
Ighv8-4A0A0A6YW26 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22,16■■□□□ 1,14
Ighv8-4A0A0A6YW26 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22,16■■□□□ 1,14
Ighv8-4A0A0A6YW26 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,1■■□□□ 1,13
Ighv8-4A0A0A6YW26 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,13
Ighv8-4A0A0A6YW26 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22,04■■□□□ 1,12
Ighv8-4A0A0A6YW26 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1,11
Ighv8-4A0A0A6YW26 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21,96■■□□□ 1,11
Ighv8-4A0A0A6YW26 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21,95■■□□□ 1,1
Ighv8-4A0A0A6YW26 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21,92■■□□□ 1,1
Ighv8-4A0A0A6YW26 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Ighv8-4A0A0A6YW26 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,84■■□□□ 1,09
Ighv8-4A0A0A6YW26 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21,77■■□□□ 1,08
Ighv8-4A0A0A6YW26 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21,75■■□□□ 1,07
Ighv8-4A0A0A6YW26 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21,75■■□□□ 1,07
Ighv8-4A0A0A6YW26 Gm42596-201ENSMUST00000196305 1958 ntBASIC21,72■■□□□ 1,07
Ighv8-4A0A0A6YW26 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21,7■■□□□ 1,06
Ighv8-4A0A0A6YW26 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,65■■□□□ 1,06
Ighv8-4A0A0A6YW26 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21,54■■□□□ 1,04
Ighv8-4A0A0A6YW26 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,52■■□□□ 1,04
Ighv8-4A0A0A6YW26 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Ighv8-4A0A0A6YW26 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Ighv8-4A0A0A6YW26 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21,49■■□□□ 1,03
Ighv8-4A0A0A6YW26 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Ighv8-4A0A0A6YW26 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Ighv8-4A0A0A6YW26 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21,43■■□□□ 1,02
Ighv8-4A0A0A6YW26 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,42■■□□□ 1,02
Ighv8-4A0A0A6YW26 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21,4■■□□□ 1,02
Ighv8-4A0A0A6YW26 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,01
Ighv8-4A0A0A6YW26 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,37■■□□□ 1,01
Ighv8-4A0A0A6YW26 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Ighv8-4A0A0A6YW26 Gm25238-201ENSMUST00000174914 89 ntBASIC21,36■■□□□ 1,01
Ighv8-4A0A0A6YW26 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,34■■□□□ 1,01
Ighv8-4A0A0A6YW26 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Ighv8-4A0A0A6YW26 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Ighv8-4A0A0A6YW26 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21,19■□□□□ 0,98
Ighv8-4A0A0A6YW26 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21,14■□□□□ 0,98
Ighv8-4A0A0A6YW26 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21,11■□□□□ 0,97
Ighv8-4A0A0A6YW26 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21,05■□□□□ 0,96
Ighv8-4A0A0A6YW26 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21,04■□□□□ 0,96
Ighv8-4A0A0A6YW26 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,02■□□□□ 0,96
Ighv8-4A0A0A6YW26 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21,02■□□□□ 0,96
Ighv8-4A0A0A6YW26 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21■□□□□ 0,95
Ighv8-4A0A0A6YW26 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0,95
Ighv8-4A0A0A6YW26 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20,97■□□□□ 0,95
Ighv8-4A0A0A6YW26 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20,97■□□□□ 0,95
Ighv8-4A0A0A6YW26 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20,94■□□□□ 0,94
Ighv8-4A0A0A6YW26 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,93■□□□□ 0,94
Ighv8-4A0A0A6YW26 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,88■□□□□ 0,93
Ighv8-4A0A0A6YW26 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20,87■□□□□ 0,93
Ighv8-4A0A0A6YW26 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20,87■□□□□ 0,93
Ighv8-4A0A0A6YW26 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20,86■□□□□ 0,93
Ighv8-4A0A0A6YW26 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20,84■□□□□ 0,93
Ighv8-4A0A0A6YW26 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20,84■□□□□ 0,93
Ighv8-4A0A0A6YW26 Gm27325-201ENSMUST00000175467 74 ntBASIC20,83■□□□□ 0,93
Ighv8-4A0A0A6YW26 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20,82■□□□□ 0,92
Ighv8-4A0A0A6YW26 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20,79■□□□□ 0,92
Ighv8-4A0A0A6YW26 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20,79■□□□□ 0,92
Ighv8-4A0A0A6YW26 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20,76■□□□□ 0,91
Ighv8-4A0A0A6YW26 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20,73■□□□□ 0,91
Ighv8-4A0A0A6YW26 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,71■□□□□ 0,91
Ighv8-4A0A0A6YW26 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20,69■□□□□ 0,9
Ighv8-4A0A0A6YW26 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20,69■□□□□ 0,9
Ighv8-4A0A0A6YW26 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20,66■□□□□ 0,9
Ighv8-4A0A0A6YW26 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20,66■□□□□ 0,9
Ighv8-4A0A0A6YW26 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20,64■□□□□ 0,9
Ighv8-4A0A0A6YW26 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20,63■□□□□ 0,89
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms