Protein–RNA interactions for Protein: A0A0A6YW26

Ighv8-4, Immunoglobulin heavy variable V8-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-4A0A0A6YW26 Gm25239-201ENSMUST00000174915 86 ntBASIC27.12■■□□□ 1.93
Ighv8-4A0A0A6YW26 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ighv8-4A0A0A6YW26 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ighv8-4A0A0A6YW26 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ighv8-4A0A0A6YW26 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ighv8-4A0A0A6YW26 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ighv8-4A0A0A6YW26 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Ighv8-4A0A0A6YW26 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ighv8-4A0A0A6YW26 Gm15042-201ENSMUST00000120212 883 ntBASIC23.79■■□□□ 1.4
Ighv8-4A0A0A6YW26 Psd-208ENSMUST00000224556 2034 ntBASIC23.57■■□□□ 1.36
Ighv8-4A0A0A6YW26 Gm24109-201ENSMUST00000175489 103 ntBASIC23.44■■□□□ 1.34
Ighv8-4A0A0A6YW26 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ighv8-4A0A0A6YW26 Gm15045-201ENSMUST00000117359 883 ntBASIC23.23■■□□□ 1.31
Ighv8-4A0A0A6YW26 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ighv8-4A0A0A6YW26 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ighv8-4A0A0A6YW26 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ighv8-4A0A0A6YW26 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ighv8-4A0A0A6YW26 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.84■■□□□ 1.25
Ighv8-4A0A0A6YW26 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ighv8-4A0A0A6YW26 Gm23366-201ENSMUST00000175022 89 ntBASIC22.71■■□□□ 1.23
Ighv8-4A0A0A6YW26 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ighv8-4A0A0A6YW26 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv8-4A0A0A6YW26 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv8-4A0A0A6YW26 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv8-4A0A0A6YW26 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv8-4A0A0A6YW26 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ighv8-4A0A0A6YW26 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv8-4A0A0A6YW26 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv8-4A0A0A6YW26 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv8-4A0A0A6YW26 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ighv8-4A0A0A6YW26 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ighv8-4A0A0A6YW26 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Ighv8-4A0A0A6YW26 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ighv8-4A0A0A6YW26 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ighv8-4A0A0A6YW26 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.16■■□□□ 1.14
Ighv8-4A0A0A6YW26 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ighv8-4A0A0A6YW26 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ighv8-4A0A0A6YW26 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ighv8-4A0A0A6YW26 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ighv8-4A0A0A6YW26 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ighv8-4A0A0A6YW26 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.96■■□□□ 1.11
Ighv8-4A0A0A6YW26 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ighv8-4A0A0A6YW26 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv8-4A0A0A6YW26 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ighv8-4A0A0A6YW26 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.84■■□□□ 1.09
Ighv8-4A0A0A6YW26 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ighv8-4A0A0A6YW26 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv8-4A0A0A6YW26 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv8-4A0A0A6YW26 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.72■■□□□ 1.07
Ighv8-4A0A0A6YW26 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.7■■□□□ 1.06
Ighv8-4A0A0A6YW26 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Ighv8-4A0A0A6YW26 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.54■■□□□ 1.04
Ighv8-4A0A0A6YW26 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ighv8-4A0A0A6YW26 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ighv8-4A0A0A6YW26 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv8-4A0A0A6YW26 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.49■■□□□ 1.03
Ighv8-4A0A0A6YW26 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv8-4A0A0A6YW26 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ighv8-4A0A0A6YW26 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.43■■□□□ 1.02
Ighv8-4A0A0A6YW26 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.42■■□□□ 1.02
Ighv8-4A0A0A6YW26 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv8-4A0A0A6YW26 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv8-4A0A0A6YW26 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.37■■□□□ 1.01
Ighv8-4A0A0A6YW26 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ighv8-4A0A0A6YW26 Gm25238-201ENSMUST00000174914 89 ntBASIC21.36■■□□□ 1.01
Ighv8-4A0A0A6YW26 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv8-4A0A0A6YW26 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv8-4A0A0A6YW26 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv8-4A0A0A6YW26 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv8-4A0A0A6YW26 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Ighv8-4A0A0A6YW26 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv8-4A0A0A6YW26 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv8-4A0A0A6YW26 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Ighv8-4A0A0A6YW26 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ighv8-4A0A0A6YW26 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv8-4A0A0A6YW26 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21■□□□□ 0.95
Ighv8-4A0A0A6YW26 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv8-4A0A0A6YW26 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv8-4A0A0A6YW26 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv8-4A0A0A6YW26 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.94■□□□□ 0.94
Ighv8-4A0A0A6YW26 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv8-4A0A0A6YW26 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv8-4A0A0A6YW26 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ighv8-4A0A0A6YW26 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Ighv8-4A0A0A6YW26 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv8-4A0A0A6YW26 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv8-4A0A0A6YW26 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ighv8-4A0A0A6YW26 Gm27325-201ENSMUST00000175467 74 ntBASIC20.83■□□□□ 0.93
Ighv8-4A0A0A6YW26 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.82■□□□□ 0.92
Ighv8-4A0A0A6YW26 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.79■□□□□ 0.92
Ighv8-4A0A0A6YW26 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ighv8-4A0A0A6YW26 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ighv8-4A0A0A6YW26 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Ighv8-4A0A0A6YW26 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv8-4A0A0A6YW26 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.69■□□□□ 0.9
Ighv8-4A0A0A6YW26 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ighv8-4A0A0A6YW26 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv8-4A0A0A6YW26 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv8-4A0A0A6YW26 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ighv8-4A0A0A6YW26 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms