RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Gm4792Q569Q2 183 aa8.63□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Ypel2Q65Z95 119 aa8.63□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Cbln3Q9JHG0 197 aa8.63□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Ramp3Q9WUP1 147 aa8.63□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Tmem92B7ZWI3 162 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Saa3P04918 122 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Saa4P31532 130 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 9130213A22RikQ3V3T2 120 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Psmg3Q9CZH3 122 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Pgpep1Q9ESW8 209 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Ttc28Q80XJ3 2450 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 KprpB2RUR4 657 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 1700067P10RikG3X8U2 183 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Gm5105Q8C6Y9 112 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Chd8Q09XV5 2582 aaKnown RBP8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 RhogP84096 191 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Gm11733Q8BQP1 125 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Olfr873Q8VFJ0 319 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Rnf115Q9D0C1 305 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 SrfQ9JM73 504 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Clec5aQ9R007 190 aa8.62□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Trav7-1A0A0G2JEV5 112 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 P01811 117 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Cdkn1bP46414 197 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Olfr1373Q7TQT6 311 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Spink6Q8BT20 105 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 4930544G11RikQ9CR99 193 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Pf4Q9Z126 105 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Vamp8O70404 101 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Gm12253Q5NC48 229 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Smim19Q80ZU4 107 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Insig2Q91WG1 225 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Xlr5cQ9JJR2 179 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Bex1Q9R224 128 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Map1aQ9QYR6 2776 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Smad7O35253 426 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Sigmar1O55242 223 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Slc25a16Q8C0K5 332 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Gm1553Q66VB7 94 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 9930022D16RikQ8BG27 128 aa8.61□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Trav3-4A0A075B654 114 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Gm5093E9PZB3 174 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Tac3P55099 116 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Klhdc1Q80YG3 406 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Dchs1E9PVD3 3291 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 9830107B12RikD3Z5D6 160 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Bak1O08734 209 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Srd5a2Q99N99 254 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Tcf24V9GWT9 166 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Trav7n-5A0A075B604 112 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Trav6-2Q5R1I4 113 aa8.6□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Igkv14-100A0A0G2JG36 117 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Brd3osA0A1B0GRB6 84 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 P01728 117 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Sp9Q64HY3 484 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Zg16Q8K0C5 167 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Trbv17A0A140T8P8 114 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Iqcf6G3UWF2 157 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 NpsP0C0P8 89 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Gm10277Q6R5C6 214 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 4933414I15RikQ9D4D5 133 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Myo9aQ8C170 2542 aa8.59□□□□□ -1.03
Rnf40-201ENSMUST00000033088 Hist1h1tQ07133 208 aa8.59□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Tmem40Q4FJU9 225 aa8.59□□□□□ -1.04
Rnf40-201ENSMUST00000033088 MavsQ8VCF0 503 aa8.59□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Setd2E9Q5F9 2537 aa8.59□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Trav6d-3A0A075B6B3 112 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Igkv13-84A0A140T8N3 115 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Fam240bJ3QMB3 78 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Reg1P43137 165 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Trav6-3Q5R1E6 112 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Olfr745Q7TRL9 328 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 1700001C19RikQ8K168 210 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Atp6v0bQ91V37 205 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Dusp14Q9JLY7 198 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Olfr748E9Q9Z0 307 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Snrnp40Q6PE01 358 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Trbv3A0A0A6YYE2 117 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Defa26Q3L180 93 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Vmn1r216Q8R257 298 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Immp1lQ9CQU8 166 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gkn1Q9CR36 201 aa8.58□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Itgb1bp1O35671 200 aa8.57□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Lgals6O54891 301 aa8.57□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gtsf1lQ9CWD0 151 aa8.57□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Col4a2P08122 1707 aa8.57□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Trav6n-6A0A075B6B2 114 aa8.57□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Tcf15Q60756 195 aa8.57□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Olfr975Q8VG91 310 aa8.57□□□□□ -1.04
Rnf40-201ENSMUST00000033088 ChodlQ9CXM0 273 aa8.57□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Wfdc2Q9DAU7 174 aa8.57□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ighv14-1A0A075B5R4 117 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 PkigO70139 76 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ca2P00920 260 aaKnown RBP8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ighv1-7A0A075B5T7 117 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Edn2P22389 175 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Defa4P28311 92 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Nit2Q9JHW2 276 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 LenepQ9WVB6 61 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Notch2O35516 2470 aa8.56□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms