Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Gm25239-201ENSMUST00000174915 86 ntBASIC32.94■■■□□ 2.86
Rnf115Q9D0C1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Rnf115Q9D0C1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rnf115Q9D0C1 Gm24109-201ENSMUST00000175489 103 ntBASIC28.64■■■□□ 2.18
Rnf115Q9D0C1 Gm15042-201ENSMUST00000120212 883 ntBASIC28.55■■■□□ 2.16
Rnf115Q9D0C1 Gm15045-201ENSMUST00000117359 883 ntBASIC27.86■■■□□ 2.05
Rnf115Q9D0C1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Rnf115Q9D0C1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Rnf115Q9D0C1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rnf115Q9D0C1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rnf115Q9D0C1 Gm23366-201ENSMUST00000175022 89 ntBASIC27.52■■■□□ 2
Rnf115Q9D0C1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Rnf115Q9D0C1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rnf115Q9D0C1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.79■■□□□ 1.88
Rnf115Q9D0C1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Rnf115Q9D0C1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rnf115Q9D0C1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
Rnf115Q9D0C1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.52■■□□□ 1.84
Rnf115Q9D0C1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf115Q9D0C1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Rnf115Q9D0C1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf115Q9D0C1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rnf115Q9D0C1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rnf115Q9D0C1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.17■■□□□ 1.78
Rnf115Q9D0C1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rnf115Q9D0C1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.13■■□□□ 1.77
Rnf115Q9D0C1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rnf115Q9D0C1 Psd-208ENSMUST00000224556 2034 ntBASIC26.08■■□□□ 1.77
Rnf115Q9D0C1 Gm25238-201ENSMUST00000174914 89 ntBASIC26.07■■□□□ 1.76
Rnf115Q9D0C1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rnf115Q9D0C1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rnf115Q9D0C1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rnf115Q9D0C1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rnf115Q9D0C1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rnf115Q9D0C1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rnf115Q9D0C1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
Rnf115Q9D0C1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.58■■□□□ 1.69
Rnf115Q9D0C1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rnf115Q9D0C1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf115Q9D0C1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf115Q9D0C1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
Rnf115Q9D0C1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf115Q9D0C1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.35■■□□□ 1.65
Rnf115Q9D0C1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.31■■□□□ 1.64
Rnf115Q9D0C1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf115Q9D0C1 Gm25262-201ENSMUST00000174934 133 ntBASIC25.16■■□□□ 1.62
Rnf115Q9D0C1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.12■■□□□ 1.61
Rnf115Q9D0C1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.05■■□□□ 1.6
Rnf115Q9D0C1 Gm27325-201ENSMUST00000175467 74 ntBASIC25■■□□□ 1.59
Rnf115Q9D0C1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rnf115Q9D0C1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.88■■□□□ 1.57
Rnf115Q9D0C1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rnf115Q9D0C1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rnf115Q9D0C1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rnf115Q9D0C1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf115Q9D0C1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf115Q9D0C1 Rab21-202ENSMUST00000218831 843 ntBASIC24.73■■□□□ 1.55
Rnf115Q9D0C1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.69■■□□□ 1.54
Rnf115Q9D0C1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.69■■□□□ 1.54
Rnf115Q9D0C1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.69■■□□□ 1.54
Rnf115Q9D0C1 Gm26115-201ENSMUST00000175605 87 ntBASIC24.65■■□□□ 1.54
Rnf115Q9D0C1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf115Q9D0C1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Rnf115Q9D0C1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rnf115Q9D0C1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf115Q9D0C1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf115Q9D0C1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rnf115Q9D0C1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.48■■□□□ 1.51
Rnf115Q9D0C1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.46■■□□□ 1.51
Rnf115Q9D0C1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf115Q9D0C1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf115Q9D0C1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.44■■□□□ 1.5
Rnf115Q9D0C1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf115Q9D0C1 Gm8109-201ENSMUST00000194076 746 ntBASIC24.4■■□□□ 1.5
Rnf115Q9D0C1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rnf115Q9D0C1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Rnf115Q9D0C1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rnf115Q9D0C1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.28■■□□□ 1.48
Rnf115Q9D0C1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rnf115Q9D0C1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.22■■□□□ 1.47
Rnf115Q9D0C1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.19■■□□□ 1.46
Rnf115Q9D0C1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf115Q9D0C1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Rnf115Q9D0C1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf115Q9D0C1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf115Q9D0C1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.16■■□□□ 1.46
Rnf115Q9D0C1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf115Q9D0C1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rnf115Q9D0C1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf115Q9D0C1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Rnf115Q9D0C1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf115Q9D0C1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf115Q9D0C1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf115Q9D0C1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf115Q9D0C1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf115Q9D0C1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rnf115Q9D0C1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf115Q9D0C1 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.93■■□□□ 1.42
Rnf115Q9D0C1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf115Q9D0C1 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms