Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Gm25239-201ENSMUST00000174915 86 ntBASIC30.79■■■□□ 2.52
Trav7n-5A0A075B604 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Trav7n-5A0A075B604 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Trav7n-5A0A075B604 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trav7n-5A0A075B604 Gm15042-201ENSMUST00000120212 883 ntBASIC27.22■■□□□ 1.95
Trav7n-5A0A075B604 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trav7n-5A0A075B604 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Trav7n-5A0A075B604 Gm15045-201ENSMUST00000117359 883 ntBASIC26.62■■□□□ 1.85
Trav7n-5A0A075B604 Gm24109-201ENSMUST00000175489 103 ntBASIC26.52■■□□□ 1.84
Trav7n-5A0A075B604 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trav7n-5A0A075B604 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trav7n-5A0A075B604 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trav7n-5A0A075B604 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Trav7n-5A0A075B604 Gm23366-201ENSMUST00000175022 89 ntBASIC25.82■■□□□ 1.72
Trav7n-5A0A075B604 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.74■■□□□ 1.71
Trav7n-5A0A075B604 Psd-208ENSMUST00000224556 2034 ntBASIC25.68■■□□□ 1.7
Trav7n-5A0A075B604 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trav7n-5A0A075B604 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trav7n-5A0A075B604 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trav7n-5A0A075B604 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trav7n-5A0A075B604 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trav7n-5A0A075B604 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trav7n-5A0A075B604 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Trav7n-5A0A075B604 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trav7n-5A0A075B604 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trav7n-5A0A075B604 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.15■■□□□ 1.62
Trav7n-5A0A075B604 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trav7n-5A0A075B604 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Trav7n-5A0A075B604 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trav7n-5A0A075B604 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.96■■□□□ 1.59
Trav7n-5A0A075B604 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trav7n-5A0A075B604 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.82■■□□□ 1.56
Trav7n-5A0A075B604 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trav7n-5A0A075B604 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trav7n-5A0A075B604 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.5■■□□□ 1.51
Trav7n-5A0A075B604 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.42■■□□□ 1.5
Trav7n-5A0A075B604 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trav7n-5A0A075B604 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Trav7n-5A0A075B604 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trav7n-5A0A075B604 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trav7n-5A0A075B604 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trav7n-5A0A075B604 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.25■■□□□ 1.47
Trav7n-5A0A075B604 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trav7n-5A0A075B604 Gm25238-201ENSMUST00000174914 89 ntBASIC24.19■■□□□ 1.46
Trav7n-5A0A075B604 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trav7n-5A0A075B604 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trav7n-5A0A075B604 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav7n-5A0A075B604 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.04■■□□□ 1.44
Trav7n-5A0A075B604 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Trav7n-5A0A075B604 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trav7n-5A0A075B604 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Trav7n-5A0A075B604 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trav7n-5A0A075B604 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.94■■□□□ 1.42
Trav7n-5A0A075B604 Gm27325-201ENSMUST00000175467 74 ntBASIC23.91■■□□□ 1.42
Trav7n-5A0A075B604 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.86■■□□□ 1.41
Trav7n-5A0A075B604 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
Trav7n-5A0A075B604 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trav7n-5A0A075B604 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trav7n-5A0A075B604 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trav7n-5A0A075B604 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trav7n-5A0A075B604 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trav7n-5A0A075B604 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.76■■□□□ 1.39
Trav7n-5A0A075B604 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trav7n-5A0A075B604 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trav7n-5A0A075B604 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Trav7n-5A0A075B604 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trav7n-5A0A075B604 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.62■■□□□ 1.37
Trav7n-5A0A075B604 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trav7n-5A0A075B604 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trav7n-5A0A075B604 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trav7n-5A0A075B604 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.57■■□□□ 1.36
Trav7n-5A0A075B604 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trav7n-5A0A075B604 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.54■■□□□ 1.36
Trav7n-5A0A075B604 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trav7n-5A0A075B604 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trav7n-5A0A075B604 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
Trav7n-5A0A075B604 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.4■■□□□ 1.34
Trav7n-5A0A075B604 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trav7n-5A0A075B604 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.33■■□□□ 1.32
Trav7n-5A0A075B604 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trav7n-5A0A075B604 Rab21-202ENSMUST00000218831 843 ntBASIC23.31■■□□□ 1.32
Trav7n-5A0A075B604 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trav7n-5A0A075B604 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trav7n-5A0A075B604 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.2■■□□□ 1.3
Trav7n-5A0A075B604 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trav7n-5A0A075B604 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Trav7n-5A0A075B604 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trav7n-5A0A075B604 Gm25262-201ENSMUST00000174934 133 ntBASIC23.11■■□□□ 1.29
Trav7n-5A0A075B604 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trav7n-5A0A075B604 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trav7n-5A0A075B604 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trav7n-5A0A075B604 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trav7n-5A0A075B604 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.02■■□□□ 1.28
Trav7n-5A0A075B604 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Trav7n-5A0A075B604 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trav7n-5A0A075B604 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trav7n-5A0A075B604 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trav7n-5A0A075B604 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trav7n-5A0A075B604 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trav7n-5A0A075B604 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 224.1 ms