RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Supt4h1bQ9Z199 117 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Kmt2eQ3UG20 1868 aa7.42□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Asxl3Q8C4A5 2259 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 A0A1L1SR50 188 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Tusc5Q8C838 173 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 BmperQ8CJ69 685 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Zfhx2Q2MHN3 2562 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Baz2aQ91YE5 1889 aaKnown RBP7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Trbv31A0A075B5J5 111 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 P01811 117 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Cox6a1P43024 111 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Tcl1b4P56844 120 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm10188Q3V432 135 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 8030423J24RikQ9CX45 142 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Zfp36P22893 319 aaKnown RBP7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Cox17P56394 63 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Defb6Q91VD6 63 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ighv1-23A0A0A6YVW3 117 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm43517E9PYS1 339 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 D930007J09RikQ9D2K6 131 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ankrd39Q9D2X0 183 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Fam241bQ9D882 120 aa7.41□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ca1P13634 261 aa7.4□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Wt1P22561 449 aa7.4□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Klk13Q8CGR6 276 aa7.4□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Cd99Q8VCN6 175 aa7.4□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Psme4Q5SSW2 1843 aa7.4□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm20499D3Z4G5 72 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gm11020F6ZGD5 61 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gm7102J3QQ10 178 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 GhrhP16043 103 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Rasl10aQ8K5A4 203 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gm10306Q9CUK2 115 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gm10762Q9CZN6 115 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Igkv4-57-1A0A075B5M4 119 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Trav14n-2A0A0G2JDF5 121 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gm20481G3UXK4 153 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 P01680 129 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Spink1P09036 80 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Tmem256Q5F285 113 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Shisa9Q9CZN4 424 aa7.4□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Polr2aP08775 1970 aaKnown RBP7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 1700084M14RikB1AT01 78 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 CtsbP10605 339 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 SpinklQ8CEK3 90 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ahctf1Q8CJF7 2243 aaKnown RBP7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Igkv4-90A0A075B5L3 117 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Trav14d-3-dv8A0A075B619 120 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 ApomQ9Z1R3 190 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Igkv8-24A0A140T8P5 121 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ccl17F6R5P4 103 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Tmem258P61166 79 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Atp6v0e1Q9CQD8 81 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Tmem14cQ9CQN6 114 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Dock5B2RY04 1868 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Igkv4-62A0A0G2JDW9 117 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Trav7-1A0A0G2JEV5 112 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Igkv4-53A0A0G2JFC6 119 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gdf15Q9Z0J7 303 aa7.39□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ighv1-69A0A0G2JFS5 117 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Zcchc24B2RVL6 241 aaKnown RBP7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Cd59aO55186 123 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gata4Q08369 441 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Mbd6Q3TY92 1003 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gm10192Q3V0S1 108 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Minos1Q7TNS2 76 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Atp6v0bQ91V37 205 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 MrapQ9D159 127 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 AtrxQ61687 2476 aaKnown RBP7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ighv8-6A0A0A6YXA3 118 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Igkv3-9A0A140T8P4 119 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ccl25O35903 144 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Dand5Q76LW6 185 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Lhfpl1Q80SV1 220 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 9430097D07RikQ8BS47 195 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Tmem190Q9D2E9 166 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 1700001C19RikQ8K168 210 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Morn5Q9DAI9 170 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Them7Q9DCP4 223 aa7.38□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ighv1-62-3P01754 117 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Tspoap1Q7TNF8 1846 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Col6a6Q8C6K9 2265 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Trav14-2A0A075B694 121 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Shisal2aA2A9G7 189 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Tmem200bD3Z0P8 284 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Rnf138Q9CQE0 245 aaKnown RBP7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Foxl2O88470 375 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Card19Q9D1I2 183 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Tpsg1Q9QUL7 311 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Cfap46E9Q2C0 2641 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Igkv20-101-2A0A0G2JDU3 113 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Edn3P48299 214 aa7.37□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ighv1-19A0A0A6YWX0 117 aa7.36□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Rspo3Q2TJ95 277 aa7.36□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 SisF8VQM5 1818 aa7.36□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 P06330 118 aa7.36□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ralgapa2A3KGS3 1872 aa7.36□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 OtofQ9ESF1 1997 aa7.36□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Mrpl32Q9DCI9 187 aaKnown RBP7.36□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Dock7Q8R1A4 2130 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms