Protein–RNA interactions for Protein: P06330

Ig heavy chain V region AC38 205.12, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06330 Gm25239-201ENSMUST00000174915 86 ntBASIC27.76■■■□□ 2.03
P06330 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
P06330 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
P06330 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
P06330 Gm15042-201ENSMUST00000120212 883 ntBASIC24.53■■□□□ 1.52
P06330 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
P06330 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
P06330 Gm15045-201ENSMUST00000117359 883 ntBASIC23.95■■□□□ 1.42
P06330 Gm24109-201ENSMUST00000175489 103 ntBASIC23.89■■□□□ 1.41
P06330 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
P06330 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
P06330 Psd-208ENSMUST00000224556 2034 ntBASIC23.62■■□□□ 1.37
P06330 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
P06330 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
P06330 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
P06330 Gm23366-201ENSMUST00000175022 89 ntBASIC23.29■■□□□ 1.32
P06330 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
P06330 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
P06330 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.1■■□□□ 1.29
P06330 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
P06330 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
P06330 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
P06330 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
P06330 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
P06330 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
P06330 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
P06330 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
P06330 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
P06330 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
P06330 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.55■■□□□ 1.2
P06330 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
P06330 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.49■■□□□ 1.19
P06330 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
P06330 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
P06330 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
P06330 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.27■■□□□ 1.15
P06330 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
P06330 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
P06330 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.1■■□□□ 1.13
P06330 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
P06330 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
P06330 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
P06330 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
P06330 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
P06330 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.92■■□□□ 1.1
P06330 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.89■■□□□ 1.09
P06330 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
P06330 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
P06330 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P06330 Gm25238-201ENSMUST00000174914 89 ntBASIC21.79■■□□□ 1.08
P06330 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
P06330 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
P06330 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
P06330 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P06330 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.57■■□□□ 1.04
P06330 Gm27325-201ENSMUST00000175467 74 ntBASIC21.52■■□□□ 1.04
P06330 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
P06330 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P06330 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.51■■□□□ 1.03
P06330 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
P06330 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.46■■□□□ 1.03
P06330 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P06330 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P06330 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.37■■□□□ 1.01
P06330 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P06330 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
P06330 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
P06330 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.3■■□□□ 1
P06330 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.29■■□□□ 1
P06330 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.28■■□□□ 1
P06330 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
P06330 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
P06330 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P06330 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P06330 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
P06330 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.25■□□□□ 0.99
P06330 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
P06330 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
P06330 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P06330 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P06330 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
P06330 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P06330 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.12■□□□□ 0.97
P06330 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
P06330 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
P06330 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P06330 Rab21-202ENSMUST00000218831 843 ntBASIC21.02■□□□□ 0.96
P06330 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.97■□□□□ 0.95
P06330 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P06330 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
P06330 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P06330 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P06330 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.92■□□□□ 0.94
P06330 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
P06330 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P06330 Gm25262-201ENSMUST00000174934 133 ntBASIC20.87■□□□□ 0.93
P06330 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P06330 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P06330 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
P06330 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms