RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Ighv1-76A0A0G2JFE9 117 aa17.7■□□□□ 0.42
Sox1-201ENSMUST00000180353 Cxcl10P17515 98 aa17.7■□□□□ 0.42
Sox1-201ENSMUST00000180353 Dctn5Q9QZB9 182 aa17.7■□□□□ 0.42
Sox1-201ENSMUST00000180353 Atg2aQ6P4T0 1914 aa17.7■□□□□ 0.42
Sox1-201ENSMUST00000180353 Onecut1O08755 465 aa17.7■□□□□ 0.42
Sox1-201ENSMUST00000180353 Gfra3O35118 397 aa17.7■□□□□ 0.42
Sox1-201ENSMUST00000180353 Olfr1380Q7TQT5 311 aa17.7■□□□□ 0.42
Sox1-201ENSMUST00000180353 Rp1P56716 2095 aa17.7■□□□□ 0.42
Sox1-201ENSMUST00000180353 Card19Q9D1I2 183 aa17.7■□□□□ 0.42
Sox1-201ENSMUST00000180353 Cbln3Q9JHG0 197 aa17.7■□□□□ 0.42
Sox1-201ENSMUST00000180353 Gm5129F6YHA9 99 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Slc25a48Q8BW66 306 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Tcrg-C1A0A075B5Z0 172 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Ighv1-18A0A0A6YXN4 117 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Gpx1P11352 201 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Ighv1-22A0A075B5U7 117 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Igkv6-25A0A140T8N7 115 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 MdfiP70331 251 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Tm2d1Q99MB3 208 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Rnf166Q3U9F6 237 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Zc3h3Q8CHP0 950 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Ralgapa1Q6GYP7 2035 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Gm8251F6VUT6 1994 aa17.69■□□□□ 0.42
Sox1-201ENSMUST00000180353 Ints1Q6P4S8 2195 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Trav4-4-dv10A0A075B651 110 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Foxf2O54743 446 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 9130213A22RikQ3V3T2 120 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 8030423J24RikQ9CX45 142 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Casp6O08738 276 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Ins2P01326 110 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Hes7Q8BKT2 225 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Trav6-6A0A075B603 114 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Olfr1189A2AV11 306 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Reg1P43137 165 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Ypel4Q65Z93 127 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Chac1Q8R3J5 223 aa17.68■□□□□ 0.42
Sox1-201ENSMUST00000180353 Pkd1l3Q2EG98 2201 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Trav3-4A0A075B654 114 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Umad1E0CX23 159 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 MycbQ6P8Z1 170 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Dock7Q8R1A4 2130 aaKnown RBP17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Iqcf6G3UWF2 157 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Mmp17Q9R0S3 578 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Gm12888Q3UW77 119 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Khdc1cQ4KL78 166 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Tex36Q9D5N9 219 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Klk4Q9Z0M1 255 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Ros1Q78DX7 2340 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Trbv19A0A0B4J1H4 117 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Il2raP01590 268 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Defb20Q30KP3 96 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Dtx2Q8R3P2 619 aa17.67■□□□□ 0.42
Sox1-201ENSMUST00000180353 Scrt1Q99M85 348 aa17.66■□□□□ 0.42
Sox1-201ENSMUST00000180353 Trav6d-3A0A075B6B3 112 aa17.66■□□□□ 0.42
Sox1-201ENSMUST00000180353 Igkv9-123A0A140T8N8 117 aa17.66■□□□□ 0.42
Sox1-201ENSMUST00000180353 CirbpP60824 172 aaKnown RBP17.66■□□□□ 0.42
Sox1-201ENSMUST00000180353 Trav6-3Q5R1E6 112 aa17.66■□□□□ 0.42
Sox1-201ENSMUST00000180353 Srsf1Q6PDM2 248 aaKnown RBP17.66■□□□□ 0.42
Sox1-201ENSMUST00000180353 Qrich2A0A140LIY9 2337 aa17.66■□□□□ 0.42
Sox1-201ENSMUST00000180353 Znrf1Q91V17 227 aa17.66■□□□□ 0.42
Sox1-201ENSMUST00000180353 Tspan13Q9D8C2 204 aa17.66■□□□□ 0.42
Sox1-201ENSMUST00000180353 A0A1Y7VLU2 103 aa17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Olfr491Q8VG06 310 aa17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Lmo1Q924W9 156 aa17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Tmem95P0DJF3 176 aa17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Samd5Q3V1H9 173 aa17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Rab1bQ9D1G1 201 aa17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Cd52Q64389 74 aa17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Hspe1Q64433 102 aaKnown RBP17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Gm10118Q8C8J5 116 aa17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Rnf115Q9D0C1 305 aa17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Gtsf1Q9DAN6 167 aa17.65■□□□□ 0.42
Sox1-201ENSMUST00000180353 Pi4kaE9Q3L2 2105 aa17.64■□□□□ 0.42
Sox1-201ENSMUST00000180353 PolP10400 120 aa17.64■□□□□ 0.42
Sox1-201ENSMUST00000180353 Rpp25lQ99JH1 163 aa17.64■□□□□ 0.42
Sox1-201ENSMUST00000180353 Q6DIA7 600 aa17.64■□□□□ 0.41
Sox1-201ENSMUST00000180353 Ighv4-1A0A075B5R5 116 aa17.64■□□□□ 0.41
Sox1-201ENSMUST00000180353 Iglv3A0A0B4J1K5 122 aa17.64■□□□□ 0.41
Sox1-201ENSMUST00000180353 Ccl2P10148 148 aa17.64■□□□□ 0.41
Sox1-201ENSMUST00000180353 Defa7P50705 93 aa17.64■□□□□ 0.41
Sox1-201ENSMUST00000180353 Pax8Q00288 457 aa17.64■□□□□ 0.41
Sox1-201ENSMUST00000180353 Gtsf1lQ9CWD0 151 aa17.64■□□□□ 0.41
Sox1-201ENSMUST00000180353 GlmpQ9JHJ3 404 aa17.64■□□□□ 0.41
Sox1-201ENSMUST00000180353 OtorQ9JIE3 128 aa17.64■□□□□ 0.41
Sox1-201ENSMUST00000180353 Olfr1181Q7TR18 311 aa17.64■□□□□ 0.41
Sox1-201ENSMUST00000180353 Ca1P13634 261 aa17.63■□□□□ 0.41
Sox1-201ENSMUST00000180353 P01759 136 aa17.63■□□□□ 0.41
Sox1-201ENSMUST00000180353 A930003A15RikQ3U552 87 aa17.63■□□□□ 0.41
Sox1-201ENSMUST00000180353 Cops9Q3U898 57 aa17.63■□□□□ 0.41
Sox1-201ENSMUST00000180353 Mrps36Q9CQX8 102 aa17.63■□□□□ 0.41
Sox1-201ENSMUST00000180353 Obox1Q9D350 204 aa17.63■□□□□ 0.41
Sox1-201ENSMUST00000180353 Dnal4Q9DCM4 105 aa17.63■□□□□ 0.41
Sox1-201ENSMUST00000180353 Trav7-5A0A0G2JFX6 112 aa17.63■□□□□ 0.41
Sox1-201ENSMUST00000180353 Lrrc25Q8K1T1 297 aa17.63■□□□□ 0.41
Sox1-201ENSMUST00000180353 Q8VC23 124 aa17.63■□□□□ 0.41
Sox1-201ENSMUST00000180353 CrxO54751 299 aa17.62■□□□□ 0.41
Sox1-201ENSMUST00000180353 Klk7Q91VE3 249 aa17.62■□□□□ 0.41
Sox1-201ENSMUST00000180353 Tomm40Q9QYA2 361 aa17.62■□□□□ 0.41
Sox1-201ENSMUST00000180353 Trav7n-5A0A075B604 112 aa17.62■□□□□ 0.41
Sox1-201ENSMUST00000180353 Igkv6-32A0A140T8N9 115 aa17.62■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 125 ms