Protein–RNA interactions for Protein: Q30KP3

Defb20, Beta-defensin 20, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb20Q30KP3 Gm25239-201ENSMUST00000174915 86 ntBASIC33.96■■■■□ 3.03
Defb20Q30KP3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Defb20Q30KP3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Defb20Q30KP3 Gm24109-201ENSMUST00000175489 103 ntBASIC29.55■■■□□ 2.32
Defb20Q30KP3 Gm15042-201ENSMUST00000120212 883 ntBASIC29.48■■■□□ 2.31
Defb20Q30KP3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Defb20Q30KP3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Defb20Q30KP3 Gm15045-201ENSMUST00000117359 883 ntBASIC28.71■■■□□ 2.19
Defb20Q30KP3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Defb20Q30KP3 Gm23366-201ENSMUST00000175022 89 ntBASIC28.37■■■□□ 2.13
Defb20Q30KP3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Defb20Q30KP3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Defb20Q30KP3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Defb20Q30KP3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.64■■■□□ 2.02
Defb20Q30KP3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Defb20Q30KP3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
Defb20Q30KP3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.36■■□□□ 1.97
Defb20Q30KP3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Defb20Q30KP3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Defb20Q30KP3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Defb20Q30KP3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Defb20Q30KP3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Defb20Q30KP3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.95■■□□□ 1.9
Defb20Q30KP3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Defb20Q30KP3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Defb20Q30KP3 Gm25238-201ENSMUST00000174914 89 ntBASIC26.84■■□□□ 1.89
Defb20Q30KP3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Defb20Q30KP3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Defb20Q30KP3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.76■■□□□ 1.87
Defb20Q30KP3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Defb20Q30KP3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Defb20Q30KP3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Defb20Q30KP3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
Defb20Q30KP3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Defb20Q30KP3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.2■■□□□ 1.78
Defb20Q30KP3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Defb20Q30KP3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.09■■□□□ 1.77
Defb20Q30KP3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Defb20Q30KP3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
Defb20Q30KP3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Defb20Q30KP3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.99■■□□□ 1.75
Defb20Q30KP3 Gm25262-201ENSMUST00000174934 133 ntBASIC25.91■■□□□ 1.74
Defb20Q30KP3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Defb20Q30KP3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.85■■□□□ 1.73
Defb20Q30KP3 Gm27325-201ENSMUST00000175467 74 ntBASIC25.76■■□□□ 1.71
Defb20Q30KP3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.7■■□□□ 1.7
Defb20Q30KP3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Defb20Q30KP3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Defb20Q30KP3 Psd-208ENSMUST00000224556 2034 ntBASIC25.54■■□□□ 1.68
Defb20Q30KP3 Rab21-202ENSMUST00000218831 843 ntBASIC25.47■■□□□ 1.67
Defb20Q30KP3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.45■■□□□ 1.66
Defb20Q30KP3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.45■■□□□ 1.66
Defb20Q30KP3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.44■■□□□ 1.66
Defb20Q30KP3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Defb20Q30KP3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Defb20Q30KP3 Gm26115-201ENSMUST00000175605 87 ntBASIC25.36■■□□□ 1.65
Defb20Q30KP3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Defb20Q30KP3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.32■■□□□ 1.64
Defb20Q30KP3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Defb20Q30KP3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
Defb20Q30KP3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.22■■□□□ 1.63
Defb20Q30KP3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Defb20Q30KP3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Defb20Q30KP3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Defb20Q30KP3 Gm8109-201ENSMUST00000194076 746 ntBASIC25.15■■□□□ 1.62
Defb20Q30KP3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Defb20Q30KP3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Defb20Q30KP3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Defb20Q30KP3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.04■■□□□ 1.6
Defb20Q30KP3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.04■■□□□ 1.6
Defb20Q30KP3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Defb20Q30KP3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Defb20Q30KP3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.94■■□□□ 1.58
Defb20Q30KP3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Defb20Q30KP3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.92■■□□□ 1.58
Defb20Q30KP3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Defb20Q30KP3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
Defb20Q30KP3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Defb20Q30KP3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Defb20Q30KP3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Defb20Q30KP3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Defb20Q30KP3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Defb20Q30KP3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Defb20Q30KP3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Defb20Q30KP3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Defb20Q30KP3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.64■■□□□ 1.54
Defb20Q30KP3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Defb20Q30KP3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Defb20Q30KP3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.58■■□□□ 1.53
Defb20Q30KP3 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.54■■□□□ 1.52
Defb20Q30KP3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Defb20Q30KP3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Defb20Q30KP3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.49■■□□□ 1.51
Defb20Q30KP3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Defb20Q30KP3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Defb20Q30KP3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Defb20Q30KP3 Gm27322-201ENSMUST00000184007 104 ntBASIC24.45■■□□□ 1.5
Defb20Q30KP3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Defb20Q30KP3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.41■■□□□ 1.5
Defb20Q30KP3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 811.5 ms