Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Gm25239-201ENSMUST00000174915 86 ntBASIC33.56■■■□□ 2.96
Casp6O08738 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Casp6O08738 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Casp6O08738 Gm15042-201ENSMUST00000120212 883 ntBASIC29.24■■■□□ 2.27
Casp6O08738 Gm24109-201ENSMUST00000175489 103 ntBASIC29.17■■■□□ 2.26
Casp6O08738 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Casp6O08738 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Casp6O08738 Gm15045-201ENSMUST00000117359 883 ntBASIC28.43■■■□□ 2.14
Casp6O08738 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Casp6O08738 Gm23366-201ENSMUST00000175022 89 ntBASIC28.12■■■□□ 2.09
Casp6O08738 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Casp6O08738 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Casp6O08738 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Casp6O08738 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Casp6O08738 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.23■■□□□ 1.95
Casp6O08738 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
Casp6O08738 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Casp6O08738 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.96■■□□□ 1.91
Casp6O08738 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Casp6O08738 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Casp6O08738 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Casp6O08738 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.7■■□□□ 1.86
Casp6O08738 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Casp6O08738 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Casp6O08738 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Casp6O08738 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Casp6O08738 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.51■■□□□ 1.83
Casp6O08738 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Casp6O08738 Gm25238-201ENSMUST00000174914 89 ntBASIC26.47■■□□□ 1.83
Casp6O08738 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Casp6O08738 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Casp6O08738 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
Casp6O08738 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Casp6O08738 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26■■□□□ 1.75
Casp6O08738 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Casp6O08738 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Casp6O08738 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.85■■□□□ 1.73
Casp6O08738 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Casp6O08738 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Casp6O08738 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.79■■□□□ 1.72
Casp6O08738 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Casp6O08738 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Casp6O08738 Gm25262-201ENSMUST00000174934 133 ntBASIC25.63■■□□□ 1.69
Casp6O08738 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.62■■□□□ 1.69
Casp6O08738 Gm27325-201ENSMUST00000175467 74 ntBASIC25.54■■□□□ 1.68
Casp6O08738 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.51■■□□□ 1.67
Casp6O08738 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Casp6O08738 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Casp6O08738 Rab21-202ENSMUST00000218831 843 ntBASIC25.26■■□□□ 1.63
Casp6O08738 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Casp6O08738 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.23■■□□□ 1.63
Casp6O08738 Psd-208ENSMUST00000224556 2034 ntBASIC25.22■■□□□ 1.63
Casp6O08738 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.22■■□□□ 1.63
Casp6O08738 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.15■■□□□ 1.62
Casp6O08738 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Casp6O08738 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.11■■□□□ 1.61
Casp6O08738 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.11■■□□□ 1.61
Casp6O08738 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Casp6O08738 Gm26115-201ENSMUST00000175605 87 ntBASIC25.06■■□□□ 1.6
Casp6O08738 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Casp6O08738 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Casp6O08738 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Casp6O08738 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.89■■□□□ 1.58
Casp6O08738 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Casp6O08738 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Casp6O08738 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Casp6O08738 Gm8109-201ENSMUST00000194076 746 ntBASIC24.8■■□□□ 1.56
Casp6O08738 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Casp6O08738 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Casp6O08738 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Casp6O08738 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.75■■□□□ 1.55
Casp6O08738 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.72■■□□□ 1.55
Casp6O08738 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.69■■□□□ 1.54
Casp6O08738 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.69■■□□□ 1.54
Casp6O08738 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Casp6O08738 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
Casp6O08738 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Casp6O08738 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Casp6O08738 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Casp6O08738 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Casp6O08738 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Casp6O08738 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Casp6O08738 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Casp6O08738 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Casp6O08738 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Casp6O08738 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.46■■□□□ 1.51
Casp6O08738 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Casp6O08738 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.35■■□□□ 1.49
Casp6O08738 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Casp6O08738 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Casp6O08738 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Casp6O08738 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Casp6O08738 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Casp6O08738 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.29■■□□□ 1.48
Casp6O08738 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.25■■□□□ 1.47
Casp6O08738 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Casp6O08738 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Casp6O08738 Gm27322-201ENSMUST00000184007 104 ntBASIC24.22■■□□□ 1.47
Casp6O08738 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Casp6O08738 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms