Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Gm25239-201ENSMUST00000174915 86 ntBASIC36.77■■■■□ 3.48
Igkv6-25A0A140T8N7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
Igkv6-25A0A140T8N7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Igkv6-25A0A140T8N7 Gm15042-201ENSMUST00000120212 883 ntBASIC32.15■■■□□ 2.74
Igkv6-25A0A140T8N7 Gm24109-201ENSMUST00000175489 103 ntBASIC31.87■■■□□ 2.69
Igkv6-25A0A140T8N7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Igkv6-25A0A140T8N7 Gm15045-201ENSMUST00000117359 883 ntBASIC31.46■■■□□ 2.63
Igkv6-25A0A140T8N7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Igkv6-25A0A140T8N7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Igkv6-25A0A140T8N7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Igkv6-25A0A140T8N7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Igkv6-25A0A140T8N7 Gm23366-201ENSMUST00000175022 89 ntBASIC30.71■■■□□ 2.51
Igkv6-25A0A140T8N7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Igkv6-25A0A140T8N7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
Igkv6-25A0A140T8N7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Igkv6-25A0A140T8N7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Igkv6-25A0A140T8N7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.74■■■□□ 2.35
Igkv6-25A0A140T8N7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.68■■■□□ 2.34
Igkv6-25A0A140T8N7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
Igkv6-25A0A140T8N7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Igkv6-25A0A140T8N7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Igkv6-25A0A140T8N7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.5■■■□□ 2.31
Igkv6-25A0A140T8N7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.35■■■□□ 2.29
Igkv6-25A0A140T8N7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Igkv6-25A0A140T8N7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Igkv6-25A0A140T8N7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
Igkv6-25A0A140T8N7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Igkv6-25A0A140T8N7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Igkv6-25A0A140T8N7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.15■■■□□ 2.26
Igkv6-25A0A140T8N7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Igkv6-25A0A140T8N7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Igkv6-25A0A140T8N7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Igkv6-25A0A140T8N7 Gm25238-201ENSMUST00000174914 89 ntBASIC29.02■■■□□ 2.24
Igkv6-25A0A140T8N7 Psd-208ENSMUST00000224556 2034 ntBASIC29■■■□□ 2.23
Igkv6-25A0A140T8N7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.99■■■□□ 2.23
Igkv6-25A0A140T8N7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Igkv6-25A0A140T8N7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Igkv6-25A0A140T8N7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.59■■■□□ 2.17
Igkv6-25A0A140T8N7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
Igkv6-25A0A140T8N7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Igkv6-25A0A140T8N7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.32■■■□□ 2.12
Igkv6-25A0A140T8N7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Igkv6-25A0A140T8N7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Igkv6-25A0A140T8N7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Igkv6-25A0A140T8N7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Igkv6-25A0A140T8N7 Gm27325-201ENSMUST00000175467 74 ntBASIC28.19■■■□□ 2.1
Igkv6-25A0A140T8N7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Igkv6-25A0A140T8N7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.15■■■□□ 2.1
Igkv6-25A0A140T8N7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
Igkv6-25A0A140T8N7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.07■■■□□ 2.08
Igkv6-25A0A140T8N7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.96■■■□□ 2.07
Igkv6-25A0A140T8N7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Igkv6-25A0A140T8N7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Igkv6-25A0A140T8N7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.83■■■□□ 2.05
Igkv6-25A0A140T8N7 Gm25262-201ENSMUST00000174934 133 ntBASIC27.77■■■□□ 2.04
Igkv6-25A0A140T8N7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.77■■■□□ 2.04
Igkv6-25A0A140T8N7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Igkv6-25A0A140T8N7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Igkv6-25A0A140T8N7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Igkv6-25A0A140T8N7 Rab21-202ENSMUST00000218831 843 ntBASIC27.66■■■□□ 2.02
Igkv6-25A0A140T8N7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.57■■■□□ 2
Igkv6-25A0A140T8N7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.55■■■□□ 2
Igkv6-25A0A140T8N7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Igkv6-25A0A140T8N7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.53■■■□□ 2
Igkv6-25A0A140T8N7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Igkv6-25A0A140T8N7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Igkv6-25A0A140T8N7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Igkv6-25A0A140T8N7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.37■■□□□ 1.97
Igkv6-25A0A140T8N7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.36■■□□□ 1.97
Igkv6-25A0A140T8N7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Igkv6-25A0A140T8N7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Igkv6-25A0A140T8N7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Igkv6-25A0A140T8N7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Igkv6-25A0A140T8N7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Igkv6-25A0A140T8N7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Igkv6-25A0A140T8N7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.29■■□□□ 1.96
Igkv6-25A0A140T8N7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Igkv6-25A0A140T8N7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Igkv6-25A0A140T8N7 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.23■■□□□ 1.95
Igkv6-25A0A140T8N7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.22■■□□□ 1.95
Igkv6-25A0A140T8N7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Igkv6-25A0A140T8N7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Igkv6-25A0A140T8N7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Igkv6-25A0A140T8N7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Igkv6-25A0A140T8N7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Igkv6-25A0A140T8N7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Igkv6-25A0A140T8N7 Gm26115-201ENSMUST00000175605 87 ntBASIC27.07■■□□□ 1.92
Igkv6-25A0A140T8N7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.05■■□□□ 1.92
Igkv6-25A0A140T8N7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Igkv6-25A0A140T8N7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Igkv6-25A0A140T8N7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.98■■□□□ 1.91
Igkv6-25A0A140T8N7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Igkv6-25A0A140T8N7 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.96■■□□□ 1.91
Igkv6-25A0A140T8N7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Igkv6-25A0A140T8N7 Gm8109-201ENSMUST00000194076 746 ntBASIC26.93■■□□□ 1.9
Igkv6-25A0A140T8N7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.93■■□□□ 1.9
Igkv6-25A0A140T8N7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Igkv6-25A0A140T8N7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Igkv6-25A0A140T8N7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.83■■□□□ 1.89
Igkv6-25A0A140T8N7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.81■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms