RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Rhox8Q6VSS7 320 aa36.63■■■■□ 3.45
Sox1-201ENSMUST00000180353 Rpgrip1Q9EPQ2 1331 aa36.55■■■■□ 3.44
Sox1-201ENSMUST00000180353 Las1lA2BE28 776 aaKnown RBP35.01■■■■□ 3.2
Sox1-201ENSMUST00000180353 Ehmt2Q9Z148 1263 aaKnown RBP34.33■■■■□ 3.09
Sox1-201ENSMUST00000180353 Cngb1E1AZ71 1325 aa34.22■■■■□ 3.07
Sox1-201ENSMUST00000180353 Acin1Q9JIX8 1338 aaKnown RBP33.83■■■■□ 3.01
Sox1-201ENSMUST00000180353 NischQ80TM9 1593 aa33.37■■■□□ 2.93
Sox1-201ENSMUST00000180353 Myt1Q8CFC2 1127 aa33.33■■■□□ 2.93
Sox1-201ENSMUST00000180353 CenpbP27790 599 aa33.32■■■□□ 2.93
Sox1-201ENSMUST00000180353 Pcgf6Q99NA9 353 aa33.31■■■□□ 2.92
Sox1-201ENSMUST00000180353 Zeb1Q64318 1117 aa33.25■■■□□ 2.91
Sox1-201ENSMUST00000180353 Pelp1Q9DBD5 1123 aaKnown RBP33.13■■■□□ 2.89
Sox1-201ENSMUST00000180353 Wdr66E9Q743 1299 aa33.1■■■□□ 2.89
Sox1-201ENSMUST00000180353 Ccdc136Q3TVA9 1136 aa32.94■■■□□ 2.86
Sox1-201ENSMUST00000180353 NefmP08553 848 aa32.41■■■□□ 2.78
Sox1-201ENSMUST00000180353 DiexfQ8BTT6 772 aaKnown RBP32.34■■■□□ 2.77
Sox1-201ENSMUST00000180353 Ccdc180J3QNE4 1664 aa32.28■■■□□ 2.76
Sox1-201ENSMUST00000180353 Supt5hO55201 1082 aaKnown RBP32.27■■■□□ 2.76
Sox1-201ENSMUST00000180353 Amer1Q7TS75 1132 aa32.27■■■□□ 2.76
Sox1-201ENSMUST00000180353 Trim41Q5NCC3 630 aa32.23■■■□□ 2.75
Sox1-201ENSMUST00000180353 Gab3Q8BSM5 595 aa32.12■■■□□ 2.73
Sox1-201ENSMUST00000180353 Cdk11bP24788 784 aaKnown RBP32.11■■■□□ 2.73
Sox1-201ENSMUST00000180353 Esf1Q3V1V3 845 aaKnown RBP31.83■■■□□ 2.69
Sox1-201ENSMUST00000180353 Rtl1Q7M732 1744 aa31.82■■■□□ 2.68
Sox1-201ENSMUST00000180353 Neurod1Q60867 357 aa31.82■■■□□ 2.68
Sox1-201ENSMUST00000180353 HrcG5E8J6 738 aa31.81■■■□□ 2.68
Sox1-201ENSMUST00000180353 Nop58Q6DFW4 536 aaKnown RBP31.73■■■□□ 2.67
Sox1-201ENSMUST00000180353 Stra8P70278 393 aa31.59■■■□□ 2.65
Sox1-201ENSMUST00000180353 Tnnt3Q9QZ47 272 aa31.54■■■□□ 2.64
Sox1-201ENSMUST00000180353 Ttbk1Q6PCN3 1308 aa31.45■■■□□ 2.63
Sox1-201ENSMUST00000180353 Abcc9P70170 1546 aa31.41■■■□□ 2.62
Sox1-201ENSMUST00000180353 Rtl5Q5DTT4 599 aa31.37■■■□□ 2.61
Sox1-201ENSMUST00000180353 Anks4bQ8K3X6 423 aa31.32■■■□□ 2.61
Sox1-201ENSMUST00000180353 Csrnp3P59055 597 aa31.26■■■□□ 2.59
Sox1-201ENSMUST00000180353 Myt1lP97500 1187 aa31.26■■■□□ 2.59
Sox1-201ENSMUST00000180353 Aplp2Q06335 707 aa31.24■■■□□ 2.59
Sox1-201ENSMUST00000180353 UbtfP25976 765 aaKnown RBP31.2■■■□□ 2.59
Sox1-201ENSMUST00000180353 Npm2Q80W85 207 aa31.2■■■□□ 2.59
Sox1-201ENSMUST00000180353 4933416C03RikQ3V063 378 aa30.98■■■□□ 2.55
Sox1-201ENSMUST00000180353 1700123L14RikQ3V2K7 440 aa30.98■■■□□ 2.55
Sox1-201ENSMUST00000180353 Ube2uB1AUC4 352 aa30.93■■■□□ 2.54
Sox1-201ENSMUST00000180353 Ppargc1bQ8VHJ7 1014 aa30.93■■■□□ 2.54
Sox1-201ENSMUST00000180353 Slc24a1Q91WD8 1130 aa30.87■■■□□ 2.53
Sox1-201ENSMUST00000180353 Sall2Q9QX96 1004 aa30.82■■■□□ 2.52
Sox1-201ENSMUST00000180353 Gm38655A0A286YDK6 273 aa30.82■■■□□ 2.52
Sox1-201ENSMUST00000180353 Anp32aO35381 247 aa30.81■■■□□ 2.52
Sox1-201ENSMUST00000180353 Dcaf1Q80TR8 1506 aa30.79■■■□□ 2.52
Sox1-201ENSMUST00000180353 Mier1Q5UAK0 511 aa30.76■■■□□ 2.51
Sox1-201ENSMUST00000180353 ClspnQ80YR7 1315 aa30.75■■■□□ 2.51
Sox1-201ENSMUST00000180353 Abcc8B2RUS7 1588 aa30.61■■■□□ 2.49
Sox1-201ENSMUST00000180353 TonslQ6NZL6 1363 aa30.58■■■□□ 2.49
Sox1-201ENSMUST00000180353 Bcl11aQ9QYE3 773 aa30.58■■■□□ 2.49
Sox1-201ENSMUST00000180353 Zcchc6Q5BLK4 1491 aaKnown RBP30.51■■■□□ 2.47
Sox1-201ENSMUST00000180353 4930567H17RikQ3V0K5 233 aa30.43■■■□□ 2.46
Sox1-201ENSMUST00000180353 Eif5bQ05D44 1216 aaKnown RBP30.3■■■□□ 2.44
Sox1-201ENSMUST00000180353 NrdcQ8BHG1 1161 aa30.21■■■□□ 2.43
Sox1-201ENSMUST00000180353 NclP09405 707 aaKnown RBP30.17■■■□□ 2.42
Sox1-201ENSMUST00000180353 Fam71e1A1L3C1 212 aa30.14■■■□□ 2.42
Sox1-201ENSMUST00000180353 DaxxO35613 739 aa30.08■■■□□ 2.41
Sox1-201ENSMUST00000180353 NeflP08551 543 aa30.03■■■□□ 2.4
Sox1-201ENSMUST00000180353 Mapk8ip2Q9ERE9 830 aa29.99■■■□□ 2.39
Sox1-201ENSMUST00000180353 Il27Q8K3I6 234 aa29.97■■■□□ 2.39
Sox1-201ENSMUST00000180353 Ccdc9Q8VC31 543 aaKnown RBP29.96■■■□□ 2.39
Sox1-201ENSMUST00000180353 Ap3b1Q9Z1T1 1105 aa29.9■■■□□ 2.38
Sox1-201ENSMUST00000180353 Gm35339A0A140LHH9 1649 aa29.86■■■□□ 2.37
Sox1-201ENSMUST00000180353 Fam50aQ9WV03 339 aaKnown RBP29.82■■■□□ 2.36
Sox1-201ENSMUST00000180353 Calr4Q3TQS0 420 aa29.8■■■□□ 2.36
Sox1-201ENSMUST00000180353 Cep164Q5DU05 1446 aa29.69■■■□□ 2.34
Sox1-201ENSMUST00000180353 Ppp4r2Q0VGB7 417 aa29.65■■■□□ 2.34
Sox1-201ENSMUST00000180353 Chic1Q8CBW7 227 aa29.62■■■□□ 2.33
Sox1-201ENSMUST00000180353 Hsp90aa1P07901 733 aaKnown RBP29.6■■■□□ 2.33
Sox1-201ENSMUST00000180353 Anp32bQ9EST5 272 aaKnown RBP29.59■■■□□ 2.33
Sox1-201ENSMUST00000180353 Wdr43Q6ZQL4 677 aaKnown RBP29.55■■■□□ 2.32
Sox1-201ENSMUST00000180353 Plekhg3Q4VAC9 1341 aa29.54■■■□□ 2.32
Sox1-201ENSMUST00000180353 Aebp2Q9Z248 504 aaKnown RBP29.53■■■□□ 2.32
Sox1-201ENSMUST00000180353 Ccdc27Q3V036 639 aa29.4■■■□□ 2.3
Sox1-201ENSMUST00000180353 Rb1cc1Q9ESK9 1588 aa29.36■■■□□ 2.29
Sox1-201ENSMUST00000180353 SafbD3YXK2 937 aaKnown RBP29.31■■■□□ 2.28
Sox1-201ENSMUST00000180353 Hnrnpul2Q00PI9 745 aaKnown RBP29.29■■■□□ 2.28
Sox1-201ENSMUST00000180353 Irx3P81067 507 aa29.28■■■□□ 2.28
Sox1-201ENSMUST00000180353 Eid3Q3V124 375 aa29.24■■■□□ 2.27
Sox1-201ENSMUST00000180353 Brd4Q9ESU6 1400 aaKnown RBP29.22■■■□□ 2.27
Sox1-201ENSMUST00000180353 PrkcshO08795 521 aa29.17■■■□□ 2.26
Sox1-201ENSMUST00000180353 Lmod2Q3UHZ5 550 aa29.13■■■□□ 2.25
Sox1-201ENSMUST00000180353 Ythdc1E9Q5K9 736 aaKnown RBP29.05■■■□□ 2.24
Sox1-201ENSMUST00000180353 Clip1Q922J3 1391 aa29.05■■■□□ 2.24
Sox1-201ENSMUST00000180353 Upf2A2AT37 1269 aaKnown RBP28.92■■■□□ 2.22
Sox1-201ENSMUST00000180353 Mrs2Q5NCE8 434 aa28.78■■■□□ 2.2
Sox1-201ENSMUST00000180353 Gtf3c3Q3TMP1 882 aa28.77■■■□□ 2.2
Sox1-201ENSMUST00000180353 Supt16hQ920B9 1047 aa28.77■■■□□ 2.2
Sox1-201ENSMUST00000180353 CanxP35564 591 aaKnown RBP28.76■■■□□ 2.19
Sox1-201ENSMUST00000180353 Pknox2Q8BG99 474 aa28.76■■■□□ 2.19
Sox1-201ENSMUST00000180353 ArxO35085 564 aa28.74■■■□□ 2.19
Sox1-201ENSMUST00000180353 Baz1aO88379 1555 aa28.74■■■□□ 2.19
Sox1-201ENSMUST00000180353 Hdac5Q9Z2V6 1113 aa28.73■■■□□ 2.19
Sox1-201ENSMUST00000180353 Npm1Q61937 292 aaKnown RBP28.64■■■□□ 2.18
Sox1-201ENSMUST00000180353 Ccer2J3QPU5 274 aa28.61■■■□□ 2.17
Sox1-201ENSMUST00000180353 Rsf1E9PWW9 1441 aaKnown RBP28.6■■■□□ 2.17
Sox1-201ENSMUST00000180353 AU015836B2RUM3 263 aa28.56■■■□□ 2.16
Sox1-201ENSMUST00000180353 Golga3P55937 1487 aa28.55■■■□□ 2.16
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms