Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Gm25239-201ENSMUST00000174915 86 ntBASIC40.91■■■■■ 4.14
Rp1P56716 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
Rp1P56716 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Rp1P56716 Gm24109-201ENSMUST00000175489 103 ntBASIC35.65■■■■□ 3.3
Rp1P56716 Gm15042-201ENSMUST00000120212 883 ntBASIC35.6■■■■□ 3.29
Rp1P56716 Gm15045-201ENSMUST00000117359 883 ntBASIC35.01■■■■□ 3.19
Rp1P56716 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
Rp1P56716 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Rp1P56716 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Rp1P56716 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Rp1P56716 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Rp1P56716 Gm23366-201ENSMUST00000175022 89 ntBASIC34.07■■■■□ 3.04
Rp1P56716 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Rp1P56716 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.22■■■□□ 2.91
Rp1P56716 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.21■■■□□ 2.91
Rp1P56716 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Rp1P56716 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.89■■■□□ 2.86
Rp1P56716 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Rp1P56716 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.74■■■□□ 2.83
Rp1P56716 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Rp1P56716 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.69■■■□□ 2.82
Rp1P56716 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Rp1P56716 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Rp1P56716 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Rp1P56716 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Rp1P56716 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rp1P56716 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rp1P56716 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.33■■■□□ 2.77
Rp1P56716 Gm25238-201ENSMUST00000174914 89 ntBASIC32.33■■■□□ 2.77
Rp1P56716 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rp1P56716 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Rp1P56716 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.18■■■□□ 2.74
Rp1P56716 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Rp1P56716 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Rp1P56716 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Rp1P56716 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Rp1P56716 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
Rp1P56716 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Rp1P56716 Psd-208ENSMUST00000224556 2034 ntBASIC31.5■■■□□ 2.63
Rp1P56716 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.45■■■□□ 2.63
Rp1P56716 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.43■■■□□ 2.62
Rp1P56716 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.34■■■□□ 2.61
Rp1P56716 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Rp1P56716 Gm27325-201ENSMUST00000175467 74 ntBASIC31.25■■■□□ 2.59
Rp1P56716 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rp1P56716 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rp1P56716 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.07■■■□□ 2.56
Rp1P56716 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Rp1P56716 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Rp1P56716 Gm25262-201ENSMUST00000174934 133 ntBASIC30.88■■■□□ 2.53
Rp1P56716 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.84■■■□□ 2.53
Rp1P56716 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Rp1P56716 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.69■■■□□ 2.5
Rp1P56716 Rab21-202ENSMUST00000218831 843 ntBASIC30.67■■■□□ 2.5
Rp1P56716 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rp1P56716 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Rp1P56716 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Rp1P56716 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.59■■■□□ 2.49
Rp1P56716 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.57■■■□□ 2.48
Rp1P56716 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.56■■■□□ 2.48
Rp1P56716 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Rp1P56716 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rp1P56716 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.45■■■□□ 2.47
Rp1P56716 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Rp1P56716 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.42■■■□□ 2.46
Rp1P56716 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.37■■■□□ 2.45
Rp1P56716 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rp1P56716 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Rp1P56716 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.35■■■□□ 2.45
Rp1P56716 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Rp1P56716 Gm26115-201ENSMUST00000175605 87 ntBASIC30.27■■■□□ 2.44
Rp1P56716 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Rp1P56716 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rp1P56716 Gm8109-201ENSMUST00000194076 746 ntBASIC30.22■■■□□ 2.43
Rp1P56716 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rp1P56716 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Rp1P56716 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Rp1P56716 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rp1P56716 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Rp1P56716 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.07■■■□□ 2.4
Rp1P56716 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rp1P56716 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.99■■■□□ 2.39
Rp1P56716 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Rp1P56716 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
Rp1P56716 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Rp1P56716 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Rp1P56716 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Rp1P56716 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rp1P56716 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rp1P56716 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rp1P56716 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.8■■■□□ 2.36
Rp1P56716 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Rp1P56716 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Rp1P56716 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.74■■■□□ 2.35
Rp1P56716 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.7■■■□□ 2.34
Rp1P56716 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.68■■■□□ 2.34
Rp1P56716 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.66■■■□□ 2.34
Rp1P56716 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rp1P56716 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rp1P56716 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms