Protein–RNA interactions for Protein: Q9R0S3

Mmp17, Matrix metalloproteinase-17, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp17Q9R0S3 Gm25239-201ENSMUST00000174915 86 ntBASIC36,84■■■■□ 3,49
Mmp17Q9R0S3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34,12■■■■□ 3,05
Mmp17Q9R0S3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33,69■■■□□ 2,98
Mmp17Q9R0S3 Gm15042-201ENSMUST00000120212 883 ntBASIC32,08■■■□□ 2,73
Mmp17Q9R0S3 Gm24109-201ENSMUST00000175489 103 ntBASIC31,96■■■□□ 2,71
Mmp17Q9R0S3 Gm15045-201ENSMUST00000117359 883 ntBASIC31,32■■■□□ 2,6
Mmp17Q9R0S3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31,2■■■□□ 2,59
Mmp17Q9R0S3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31,13■■■□□ 2,57
Mmp17Q9R0S3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31,06■■■□□ 2,56
Mmp17Q9R0S3 Gm23366-201ENSMUST00000175022 89 ntBASIC30,79■■■□□ 2,52
Mmp17Q9R0S3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,51
Mmp17Q9R0S3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Mmp17Q9R0S3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Mmp17Q9R0S3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,97■■■□□ 2,39
Mmp17Q9R0S3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29,86■■■□□ 2,37
Mmp17Q9R0S3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29,8■■■□□ 2,36
Mmp17Q9R0S3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29,69■■■□□ 2,34
Mmp17Q9R0S3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29,61■■■□□ 2,33
Mmp17Q9R0S3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29,58■■■□□ 2,33
Mmp17Q9R0S3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29,47■■■□□ 2,31
Mmp17Q9R0S3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,4■■■□□ 2,3
Mmp17Q9R0S3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,3■■■□□ 2,28
Mmp17Q9R0S3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29,3■■■□□ 2,28
Mmp17Q9R0S3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29,25■■■□□ 2,27
Mmp17Q9R0S3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Mmp17Q9R0S3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Mmp17Q9R0S3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29,2■■■□□ 2,26
Mmp17Q9R0S3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29,18■■■□□ 2,26
Mmp17Q9R0S3 Gm25238-201ENSMUST00000174914 89 ntBASIC29,11■■■□□ 2,25
Mmp17Q9R0S3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,08■■■□□ 2,25
Mmp17Q9R0S3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28,92■■■□□ 2,22
Mmp17Q9R0S3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,89■■■□□ 2,22
Mmp17Q9R0S3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,76■■■□□ 2,19
Mmp17Q9R0S3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Mmp17Q9R0S3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28,61■■■□□ 2,17
Mmp17Q9R0S3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28,5■■■□□ 2,15
Mmp17Q9R0S3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28,4■■■□□ 2,14
Mmp17Q9R0S3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,37■■■□□ 2,13
Mmp17Q9R0S3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28,35■■■□□ 2,13
Mmp17Q9R0S3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28,35■■■□□ 2,13
Mmp17Q9R0S3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28,29■■■□□ 2,12
Mmp17Q9R0S3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28,27■■■□□ 2,12
Mmp17Q9R0S3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28,18■■■□□ 2,1
Mmp17Q9R0S3 Psd-208ENSMUST00000224556 2034 ntBASIC28,13■■■□□ 2,09
Mmp17Q9R0S3 Gm27325-201ENSMUST00000175467 74 ntBASIC28,1■■■□□ 2,09
Mmp17Q9R0S3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28,04■■■□□ 2,08
Mmp17Q9R0S3 Gm25262-201ENSMUST00000174934 133 ntBASIC28■■■□□ 2,07
Mmp17Q9R0S3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27,92■■■□□ 2,06
Mmp17Q9R0S3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,8■■■□□ 2,04
Mmp17Q9R0S3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27,72■■■□□ 2,03
Mmp17Q9R0S3 Rab21-202ENSMUST00000218831 843 ntBASIC27,69■■■□□ 2,02
Mmp17Q9R0S3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27,68■■■□□ 2,02
Mmp17Q9R0S3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,68■■■□□ 2,02
Mmp17Q9R0S3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27,63■■■□□ 2,01
Mmp17Q9R0S3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,63■■■□□ 2,01
Mmp17Q9R0S3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27,61■■■□□ 2,01
Mmp17Q9R0S3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27,59■■■□□ 2,01
Mmp17Q9R0S3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27,5■■□□□ 1,99
Mmp17Q9R0S3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27,48■■□□□ 1,99
Mmp17Q9R0S3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27,47■■□□□ 1,99
Mmp17Q9R0S3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,4■■□□□ 1,98
Mmp17Q9R0S3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27,39■■□□□ 1,97
Mmp17Q9R0S3 Gm26115-201ENSMUST00000175605 87 ntBASIC27,36■■□□□ 1,97
Mmp17Q9R0S3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27,34■■□□□ 1,97
Mmp17Q9R0S3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27,33■■□□□ 1,97
Mmp17Q9R0S3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27,31■■□□□ 1,96
Mmp17Q9R0S3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27,3■■□□□ 1,96
Mmp17Q9R0S3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27,24■■□□□ 1,95
Mmp17Q9R0S3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27,23■■□□□ 1,95
Mmp17Q9R0S3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27,23■■□□□ 1,95
Mmp17Q9R0S3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,23■■□□□ 1,95
Mmp17Q9R0S3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27,22■■□□□ 1,95
Mmp17Q9R0S3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27,15■■□□□ 1,94
Mmp17Q9R0S3 Gm8109-201ENSMUST00000194076 746 ntBASIC27,15■■□□□ 1,94
Mmp17Q9R0S3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27,13■■□□□ 1,93
Mmp17Q9R0S3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27,13■■□□□ 1,93
Mmp17Q9R0S3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27,11■■□□□ 1,93
Mmp17Q9R0S3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27,09■■□□□ 1,93
Mmp17Q9R0S3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27,07■■□□□ 1,92
Mmp17Q9R0S3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27,04■■□□□ 1,92
Mmp17Q9R0S3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,04■■□□□ 1,92
Mmp17Q9R0S3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,01■■□□□ 1,92
Mmp17Q9R0S3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26,99■■□□□ 1,91
Mmp17Q9R0S3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26,95■■□□□ 1,9
Mmp17Q9R0S3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26,94■■□□□ 1,9
Mmp17Q9R0S3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26,89■■□□□ 1,9
Mmp17Q9R0S3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Mmp17Q9R0S3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26,86■■□□□ 1,89
Mmp17Q9R0S3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26,82■■□□□ 1,88
Mmp17Q9R0S3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26,77■■□□□ 1,88
Mmp17Q9R0S3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26,76■■□□□ 1,87
Mmp17Q9R0S3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26,74■■□□□ 1,87
Mmp17Q9R0S3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Mmp17Q9R0S3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26,7■■□□□ 1,86
Mmp17Q9R0S3 Gm17082-201ENSMUST00000166043 1091 ntBASIC26,69■■□□□ 1,86
Mmp17Q9R0S3 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,68■■□□□ 1,86
Mmp17Q9R0S3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26,67■■□□□ 1,86
Mmp17Q9R0S3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
Mmp17Q9R0S3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
Mmp17Q9R0S3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26,6■■□□□ 1,85
Retrieved 100 of 76,532 protein–RNA pairs in 20,8 ms