RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W BCP1Q06338 283 aa5.94□□□□□ -1.46
SUB2YDL084W DIS3Q08162 1001 aaKnown RBP5.94□□□□□ -1.46
SUB2YDL084W KEL3Q08979 651 aaPredicted RBP5.94□□□□□ -1.46
SUB2YDL084W PAR32Q12515 295 aaKnown RBP5.94□□□□□ -1.46
SUB2YDL084W ATG11Q12527 1178 aa5.94□□□□□ -1.46
SUB2YDL084W YOS9Q99220 542 aa5.94□□□□□ -1.46
SUB2YDL084W RAD61Q99359 647 aa5.94□□□□□ -1.46
SUB2YDL084W TY1A-DR4O74302 440 aa5.93□□□□□ -1.46
SUB2YDL084W TDH1P00360 332 aaKnown RBP5.93□□□□□ -1.46
SUB2YDL084W HIS4P00815 799 aaKnown RBP5.93□□□□□ -1.46
SUB2YDL084W PRB1P09232 635 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-HP0C2I4 478 aaKnown RBP5.93□□□□□ -1.46
SUB2YDL084W TY1A-AP0CX57 440 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-PR1P0CX58 440 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-ORP0CX59 440 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-PR2P0CX60 440 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-DR5P0CX65 440 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-ER2P0CX66 440 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-GR3P0CX67 440 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-LR1P0CX68 440 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-MR2P0CX69 440 aa5.93□□□□□ -1.46
SUB2YDL084W THR1P17423 357 aaKnown RBP5.93□□□□□ -1.46
SUB2YDL084W URA4P20051 364 aa5.93□□□□□ -1.46
SUB2YDL084W DBP3P20447 523 aaKnown RBP5.93□□□□□ -1.46
SUB2YDL084W VPS34P22543 875 aa5.93□□□□□ -1.46
SUB2YDL084W BOS1P25385 244 aa5.93□□□□□ -1.46
SUB2YDL084W RER1P25560 188 aa5.93□□□□□ -1.46
SUB2YDL084W FUN30P31380 1131 aa5.93□□□□□ -1.46
SUB2YDL084W SIN4P32259 974 aa5.93□□□□□ -1.46
SUB2YDL084W CBF2P32504 956 aa5.93□□□□□ -1.46
SUB2YDL084W LAS1P36146 502 aaPredicted RBP5.93□□□□□ -1.46
SUB2YDL084W CBR1P38626 284 aaKnown RBP5.93□□□□□ -1.46
SUB2YDL084W YHR054CP38780 354 aa5.93□□□□□ -1.46
SUB2YDL084W LIN1P38852 340 aaPredicted RBP5.93□□□□□ -1.46
SUB2YDL084W SNL1P40548 159 aa5.93□□□□□ -1.46
SUB2YDL084W MVP1P40959 511 aaKnown RBP5.93□□□□□ -1.46
SUB2YDL084W TY1A-JR2P47099 440 aa5.93□□□□□ -1.46
SUB2YDL084W RMR1P53060 241 aa5.93□□□□□ -1.46
SUB2YDL084W TUB4P53378 473 aa5.93□□□□□ -1.46
SUB2YDL084W MNT4P53745 580 aa5.93□□□□□ -1.46
SUB2YDL084W PGA2P53903 129 aa5.93□□□□□ -1.46
SUB2YDL084W UFD2P54860 961 aa5.93□□□□□ -1.46
SUB2YDL084W CIK1Q01649 594 aa5.93□□□□□ -1.46
SUB2YDL084W RPT6Q01939 405 aaKnown RBP5.93□□□□□ -1.46
SUB2YDL084W TY1A-DR1Q03856 440 aa5.93□□□□□ -1.46
SUB2YDL084W NHX1Q04121 633 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-ML1Q04706 440 aaKnown RBP5.93□□□□□ -1.46
SUB2YDL084W ECM38Q05902 660 aaPredicted RBP5.93□□□□□ -1.46
SUB2YDL084W MLC2Q06580 163 aa5.93□□□□□ -1.46
SUB2YDL084W ATG13Q06628 738 aa5.93□□□□□ -1.46
SUB2YDL084W OMS1Q06668 471 aa5.93□□□□□ -1.46
SUB2YDL084W RSA1Q08932 381 aa5.93□□□□□ -1.46
SUB2YDL084W MSH5Q12175 901 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-BRQ12217 440 aa5.93□□□□□ -1.46
SUB2YDL084W ISA2Q12425 185 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-NL2Q12470 440 aa5.93□□□□□ -1.46
SUB2YDL084W PFK27Q12471 397 aaPredicted RBP5.93□□□□□ -1.46
SUB2YDL084W FRE6Q12473 712 aa5.93□□□□□ -1.46
SUB2YDL084W TY1A-GR2Q12485 440 aa5.93□□□□□ -1.46
SUB2YDL084W MON2P48563 1636 aaPredicted RBP5.93□□□□□ -1.46
SUB2YDL084W XRN1P22147 1528 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W STE12P13574 688 aa5.92□□□□□ -1.46
SUB2YDL084W PRP4P20053 465 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W NPR1P22211 790 aa5.92□□□□□ -1.46
SUB2YDL084W CLB4P24871 460 aa5.92□□□□□ -1.46
SUB2YDL084W CWH43P25618 953 aa5.92□□□□□ -1.46
SUB2YDL084W PRP19P32523 503 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W OCT1P35999 772 aa5.92□□□□□ -1.46
SUB2YDL084W YKR015CP36111 568 aa5.92□□□□□ -1.46
SUB2YDL084W MRX3P38172 270 aa5.92□□□□□ -1.46
SUB2YDL084W GND1P38720 489 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W YHR182WP38870 785 aa5.92□□□□□ -1.46
SUB2YDL084W TAT2P38967 592 aa5.92□□□□□ -1.46
SUB2YDL084W STT3P39007 718 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W AIM9P40053 627 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W YJL068CP40363 299 aa5.92□□□□□ -1.46
SUB2YDL084W TMA22P47089 198 aaPredicted RBP5.92□□□□□ -1.46
SUB2YDL084W RBL2P48606 106 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W IMD4P50094 524 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W RAI1P53063 387 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W SLX9P53251 210 aaPredicted RBP5.92□□□□□ -1.46
SUB2YDL084W UTP8P53276 713 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W YNR068CP53754 272 aa5.92□□□□□ -1.46
SUB2YDL084W CBK1P53894 756 aa5.92□□□□□ -1.46
SUB2YDL084W EOS1P53938 366 aa5.92□□□□□ -1.46
SUB2YDL084W RCM1P53972 490 aa5.92□□□□□ -1.46
SUB2YDL084W UGO1Q03327 502 aa5.92□□□□□ -1.46
SUB2YDL084W URC2Q04411 772 aa5.92□□□□□ -1.46
SUB2YDL084W YMR114CQ04471 368 aaKnown RBP5.92□□□□□ -1.46
SUB2YDL084W BRE4Q07660 1125 aa5.92□□□□□ -1.46
SUB2YDL084W YPL216WQ08964 1102 aa5.92□□□□□ -1.46
SUB2YDL084W RTR2Q12378 196 aa5.92□□□□□ -1.46
SUB2YDL084W ARP6Q12509 438 aa5.92□□□□□ -1.46
SUB2YDL084W SEY1Q99287 776 aa5.92□□□□□ -1.46
SUB2YDL084W CDC36P06100 191 aaPredicted RBP5.91□□□□□ -1.46
SUB2YDL084W CHS1P08004 1131 aa5.91□□□□□ -1.46
SUB2YDL084W SUP45P12385 437 aaKnown RBP5.91□□□□□ -1.46
SUB2YDL084W APA1P16550 321 aaKnown RBP5.91□□□□□ -1.46
SUB2YDL084W CBP3P21560 335 aa5.91□□□□□ -1.46
SUB2YDL084W SAN1P22470 610 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms