RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W MTC1P47018 478 aaKnown RBP11.82□□□□□ -0.52
SUB2YDL084W FAP1P53971 965 aa11.28□□□□□ -0.6
SUB2YDL084W PRY3P47033 881 aa10.62□□□□□ -0.71
SUB2YDL084W DRS1P32892 752 aaKnown RBP10.45□□□□□ -0.74
SUB2YDL084W AAD16Q02895 342 aa10.3□□□□□ -0.76
SUB2YDL084W PRI1P10363 409 aa10.29□□□□□ -0.76
SUB2YDL084W RQC2Q12532 1038 aaKnown RBP10.01□□□□□ -0.81
SUB2YDL084W YCK3P39962 524 aa9.99□□□□□ -0.81
SUB2YDL084W HAA1Q12753 694 aaKnown RBP9.95□□□□□ -0.82
SUB2YDL084W ISW2Q08773 1120 aa9.93□□□□□ -0.82
SUB2YDL084W RPG1P38249 964 aaKnown RBP9.82□□□□□ -0.84
SUB2YDL084W TSR3Q12094 313 aaKnown RBP9.67□□□□□ -0.86
SUB2YDL084W TAF7Q05021 590 aa9.38□□□□□ -0.91
SUB2YDL084W DIP2Q12220 943 aaPredicted RBP9.37□□□□□ -0.91
SUB2YDL084W BFR2Q06631 534 aaKnown RBP9.36□□□□□ -0.91
SUB2YDL084W MRPL32P25348 183 aa9.32□□□□□ -0.92
SUB2YDL084W RSE1Q04693 1361 aaKnown RBP9.24□□□□□ -0.93
SUB2YDL084W YGL015CP33199 130 aa9.1□□□□□ -0.95
SUB2YDL084W REB1P21538 810 aa9□□□□□ -0.97
SUB2YDL084W TFA1P36100 482 aa8.99□□□□□ -0.97
SUB2YDL084W RPL17AP05740 184 aaKnown RBP8.98□□□□□ -0.97
SUB2YDL084W RPL17BP46990 184 aaKnown RBP8.98□□□□□ -0.97
SUB2YDL084W AVT3P36062 692 aa8.87□□□□□ -0.99
SUB2YDL084W URN1Q06525 465 aaKnown RBP8.78□□□□□ -1
SUB2YDL084W CDC27P38042 758 aa8.73□□□□□ -1.01
SUB2YDL084W BUD31P25337 157 aaPredicted RBP8.6□□□□□ -1.03
SUB2YDL084W UBP10P53874 792 aaPredicted RBP8.59□□□□□ -1.03
SUB2YDL084W YKR023WP36119 530 aaKnown RBP8.56□□□□□ -1.04
SUB2YDL084W SPT21P35209 758 aa8.54□□□□□ -1.04
SUB2YDL084W MAP2P38174 421 aaKnown RBP8.54□□□□□ -1.04
SUB2YDL084W TFC8Q12308 588 aa8.4□□□□□ -1.06
SUB2YDL084W HOP09932 586 aa8.38□□□□□ -1.07
SUB2YDL084W DCD1P06773 312 aa8.35□□□□□ -1.07
SUB2YDL084W SIS2P36024 562 aa8.29□□□□□ -1.08
SUB2YDL084W SCY1P53009 804 aa8.27□□□□□ -1.09
SUB2YDL084W TIF4632P39936 914 aaKnown RBP8.25□□□□□ -1.09
SUB2YDL084W YRB30P53107 440 aaPredicted RBP8.25□□□□□ -1.09
SUB2YDL084W TGL3P40308 642 aa8.22□□□□□ -1.09
SUB2YDL084W SLX5P32828 619 aaKnown RBP8.21□□□□□ -1.1
SUB2YDL084W EBP2P36049 427 aaKnown RBP8.2□□□□□ -1.1
SUB2YDL084W LEO1P38439 464 aa8.2□□□□□ -1.1
SUB2YDL084W NAP1P25293 417 aaKnown RBP8.17□□□□□ -1.1
SUB2YDL084W CAB3P36076 571 aa8.17□□□□□ -1.1
SUB2YDL084W UBP9P39967 754 aa8.15□□□□□ -1.1
SUB2YDL084W SIS1P25294 352 aaKnown RBP8.14□□□□□ -1.11
SUB2YDL084W AIM44Q99299 758 aa8.14□□□□□ -1.11
SUB2YDL084W RIM101P33400 625 aa8.11□□□□□ -1.11
SUB2YDL084W BCH2P36122 765 aa8.09□□□□□ -1.11
SUB2YDL084W YFR016CP43597 1233 aaKnown RBP8.08□□□□□ -1.12
SUB2YDL084W IOC4Q04213 475 aa8.03□□□□□ -1.12
SUB2YDL084W DMA1P38823 416 aa8.01□□□□□ -1.13
SUB2YDL084W RPS0BP46654 252 aaKnown RBP8.01□□□□□ -1.13
SUB2YDL084W MNN4P36044 1178 aa7.91□□□□□ -1.14
SUB2YDL084W KRI1P42846 591 aaKnown RBP7.91□□□□□ -1.14
SUB2YDL084W NOP2P40991 618 aaKnown RBP7.89□□□□□ -1.15
SUB2YDL084W EPS1P40557 701 aa7.86□□□□□ -1.15
SUB2YDL084W BDF1P35817 686 aa7.84□□□□□ -1.15
SUB2YDL084W OXP1P28273 1286 aa7.81□□□□□ -1.16
SUB2YDL084W TOP1P04786 769 aa7.79□□□□□ -1.16
SUB2YDL084W MST1P07236 462 aa7.79□□□□□ -1.16
SUB2YDL084W SNU71P53207 620 aaKnown RBP7.77□□□□□ -1.17
SUB2YDL084W YOR238WQ08634 303 aa7.76□□□□□ -1.17
SUB2YDL084W YBL029C-AQ3E756 94 aa7.75□□□□□ -1.17
SUB2YDL084W IFH1P39520 1085 aa7.74□□□□□ -1.17
SUB2YDL084W PTP3P40048 928 aa7.73□□□□□ -1.17
SUB2YDL084W YIL055CP40523 627 aaKnown RBP7.73□□□□□ -1.17
SUB2YDL084W NSR1P27476 414 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
SUB2YDL084W VNX1P42839 908 aa7.65□□□□□ -1.18
SUB2YDL084W BBC1P47068 1157 aa7.64□□□□□ -1.19
SUB2YDL084W YAP5P40574 245 aa7.62□□□□□ -1.19
SUB2YDL084W DEF1P35732 738 aaKnown RBP7.6□□□□□ -1.19
SUB2YDL084W RSM7P47150 247 aa7.6□□□□□ -1.19
SUB2YDL084W ORC1P54784 914 aaPredicted RBP7.59□□□□□ -1.19
SUB2YDL084W CWC22P53333 577 aaKnown RBP7.58□□□□□ -1.2
SUB2YDL084W SPP1Q03012 353 aa7.58□□□□□ -1.2
SUB2YDL084W AI2P03876 854 aa7.57□□□□□ -1.2
SUB2YDL084W WSC3Q12215 556 aa7.55□□□□□ -1.2
SUB2YDL084W MDG1P53885 366 aa7.54□□□□□ -1.2
SUB2YDL084W YAH1Q12184 172 aaKnown RBP7.51□□□□□ -1.21
SUB2YDL084W PSH1Q12161 406 aa7.5□□□□□ -1.21
SUB2YDL084W TIF11P38912 153 aaKnown RBP7.49□□□□□ -1.21
SUB2YDL084W BRL1P38770 471 aa7.48□□□□□ -1.21
SUB2YDL084W GTT3P39996 337 aa7.48□□□□□ -1.21
SUB2YDL084W AIR2Q12476 344 aaKnown RBP7.48□□□□□ -1.21
SUB2YDL084W FKH1P40466 484 aa7.46□□□□□ -1.22
SUB2YDL084W YJL171CP46992 396 aa7.46□□□□□ -1.22
SUB2YDL084W RLP24Q07915 199 aaKnown RBP7.46□□□□□ -1.22
SUB2YDL084W GIN4Q12263 1142 aa7.46□□□□□ -1.22
SUB2YDL084W LEU3P08638 886 aa7.45□□□□□ -1.22
SUB2YDL084W FPR3P38911 411 aaKnown RBP7.45□□□□□ -1.22
SUB2YDL084W PLP2Q12017 286 aa7.45□□□□□ -1.22
SUB2YDL084W SUB1P54000 292 aaKnown RBP7.44□□□□□ -1.22
SUB2YDL084W HIF1Q12373 385 aa7.43□□□□□ -1.22
SUB2YDL084W HSP82P02829 709 aaKnown RBP7.42□□□□□ -1.22
SUB2YDL084W DMA2P53924 522 aa7.42□□□□□ -1.22
SUB2YDL084W VPS72Q03388 795 aa7.42□□□□□ -1.22
SUB2YDL084W TOA1P32773 286 aa7.41□□□□□ -1.22
SUB2YDL084W RPS0AP32905 252 aaKnown RBP7.4□□□□□ -1.22
SUB2YDL084W YPR148CQ06523 435 aa7.4□□□□□ -1.22
SUB2YDL084W RLF2Q12495 606 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms