RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W MTC1P47018 478 aaKnown RBP11.82□□□□□ -0.52
SUB2YDL084W FAP1P53971 965 aa11.28□□□□□ -0.6
SUB2YDL084W PRY3P47033 881 aa10.62□□□□□ -0.71
SUB2YDL084W DRS1P32892 752 aaKnown RBP10.45□□□□□ -0.74
SUB2YDL084W AAD16Q02895 342 aa10.3□□□□□ -0.76
SUB2YDL084W PRI1P10363 409 aa10.29□□□□□ -0.76
SUB2YDL084W RQC2Q12532 1038 aaKnown RBP10.01□□□□□ -0.81
SUB2YDL084W YCK3P39962 524 aa9.99□□□□□ -0.81
SUB2YDL084W HAA1Q12753 694 aaKnown RBP9.95□□□□□ -0.82
SUB2YDL084W ISW2Q08773 1120 aa9.93□□□□□ -0.82
SUB2YDL084W RPG1P38249 964 aaKnown RBP9.82□□□□□ -0.84
SUB2YDL084W TSR3Q12094 313 aaKnown RBP9.67□□□□□ -0.86
SUB2YDL084W TAF7Q05021 590 aa9.38□□□□□ -0.91
SUB2YDL084W DIP2Q12220 943 aaPredicted RBP9.37□□□□□ -0.91
SUB2YDL084W BFR2Q06631 534 aaKnown RBP9.36□□□□□ -0.91
SUB2YDL084W MRPL32P25348 183 aa9.32□□□□□ -0.92
SUB2YDL084W RSE1Q04693 1361 aaKnown RBP9.24□□□□□ -0.93
SUB2YDL084W YGL015CP33199 130 aa9.1□□□□□ -0.95
SUB2YDL084W REB1P21538 810 aa9□□□□□ -0.97
SUB2YDL084W TFA1P36100 482 aa8.99□□□□□ -0.97
SUB2YDL084W RPL17AP05740 184 aaKnown RBP8.98□□□□□ -0.97
SUB2YDL084W RPL17BP46990 184 aaKnown RBP8.98□□□□□ -0.97
SUB2YDL084W AVT3P36062 692 aa8.87□□□□□ -0.99
SUB2YDL084W URN1Q06525 465 aaKnown RBP8.78□□□□□ -1
SUB2YDL084W CDC27P38042 758 aa8.73□□□□□ -1.01
SUB2YDL084W BUD31P25337 157 aaPredicted RBP8.6□□□□□ -1.03
SUB2YDL084W UBP10P53874 792 aaPredicted RBP8.59□□□□□ -1.03
SUB2YDL084W YKR023WP36119 530 aaKnown RBP8.56□□□□□ -1.04
SUB2YDL084W SPT21P35209 758 aa8.54□□□□□ -1.04
SUB2YDL084W MAP2P38174 421 aaKnown RBP8.54□□□□□ -1.04
SUB2YDL084W TFC8Q12308 588 aa8.4□□□□□ -1.06
SUB2YDL084W HOP09932 586 aa8.38□□□□□ -1.07
SUB2YDL084W DCD1P06773 312 aa8.35□□□□□ -1.07
SUB2YDL084W SIS2P36024 562 aa8.29□□□□□ -1.08
SUB2YDL084W SCY1P53009 804 aa8.27□□□□□ -1.09
SUB2YDL084W TIF4632P39936 914 aaKnown RBP8.25□□□□□ -1.09
SUB2YDL084W YRB30P53107 440 aaPredicted RBP8.25□□□□□ -1.09
SUB2YDL084W TGL3P40308 642 aa8.22□□□□□ -1.09
SUB2YDL084W SLX5P32828 619 aaKnown RBP8.21□□□□□ -1.1
SUB2YDL084W EBP2P36049 427 aaKnown RBP8.2□□□□□ -1.1
SUB2YDL084W LEO1P38439 464 aa8.2□□□□□ -1.1
SUB2YDL084W NAP1P25293 417 aaKnown RBP8.17□□□□□ -1.1
SUB2YDL084W CAB3P36076 571 aa8.17□□□□□ -1.1
SUB2YDL084W UBP9P39967 754 aa8.15□□□□□ -1.1
SUB2YDL084W SIS1P25294 352 aaKnown RBP8.14□□□□□ -1.11
SUB2YDL084W AIM44Q99299 758 aa8.14□□□□□ -1.11
SUB2YDL084W RIM101P33400 625 aa8.11□□□□□ -1.11
SUB2YDL084W BCH2P36122 765 aa8.09□□□□□ -1.11
SUB2YDL084W YFR016CP43597 1233 aaKnown RBP8.08□□□□□ -1.12
SUB2YDL084W IOC4Q04213 475 aa8.03□□□□□ -1.12
SUB2YDL084W DMA1P38823 416 aa8.01□□□□□ -1.13
SUB2YDL084W RPS0BP46654 252 aaKnown RBP8.01□□□□□ -1.13
SUB2YDL084W MNN4P36044 1178 aa7.91□□□□□ -1.14
SUB2YDL084W KRI1P42846 591 aaKnown RBP7.91□□□□□ -1.14
SUB2YDL084W NOP2P40991 618 aaKnown RBP7.89□□□□□ -1.15
SUB2YDL084W EPS1P40557 701 aa7.86□□□□□ -1.15
SUB2YDL084W BDF1P35817 686 aa7.84□□□□□ -1.15
SUB2YDL084W OXP1P28273 1286 aa7.81□□□□□ -1.16
SUB2YDL084W TOP1P04786 769 aa7.79□□□□□ -1.16
SUB2YDL084W MST1P07236 462 aa7.79□□□□□ -1.16
SUB2YDL084W SNU71P53207 620 aaKnown RBP7.77□□□□□ -1.17
SUB2YDL084W YOR238WQ08634 303 aa7.76□□□□□ -1.17
SUB2YDL084W YBL029C-AQ3E756 94 aa7.75□□□□□ -1.17
SUB2YDL084W IFH1P39520 1085 aa7.74□□□□□ -1.17
SUB2YDL084W PTP3P40048 928 aa7.73□□□□□ -1.17
SUB2YDL084W YIL055CP40523 627 aaKnown RBP7.73□□□□□ -1.17
SUB2YDL084W NSR1P27476 414 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
SUB2YDL084W VNX1P42839 908 aa7.65□□□□□ -1.18
SUB2YDL084W BBC1P47068 1157 aa7.64□□□□□ -1.19
SUB2YDL084W YAP5P40574 245 aa7.62□□□□□ -1.19
SUB2YDL084W DEF1P35732 738 aaKnown RBP7.6□□□□□ -1.19
SUB2YDL084W RSM7P47150 247 aa7.6□□□□□ -1.19
SUB2YDL084W ORC1P54784 914 aaPredicted RBP7.59□□□□□ -1.19
SUB2YDL084W CWC22P53333 577 aaKnown RBP7.58□□□□□ -1.2
SUB2YDL084W SPP1Q03012 353 aa7.58□□□□□ -1.2
SUB2YDL084W AI2P03876 854 aa7.57□□□□□ -1.2
SUB2YDL084W WSC3Q12215 556 aa7.55□□□□□ -1.2
SUB2YDL084W MDG1P53885 366 aa7.54□□□□□ -1.2
SUB2YDL084W YAH1Q12184 172 aaKnown RBP7.51□□□□□ -1.21
SUB2YDL084W PSH1Q12161 406 aa7.5□□□□□ -1.21
SUB2YDL084W TIF11P38912 153 aaKnown RBP7.49□□□□□ -1.21
SUB2YDL084W BRL1P38770 471 aa7.48□□□□□ -1.21
SUB2YDL084W GTT3P39996 337 aa7.48□□□□□ -1.21
SUB2YDL084W AIR2Q12476 344 aaKnown RBP7.48□□□□□ -1.21
SUB2YDL084W FKH1P40466 484 aa7.46□□□□□ -1.22
SUB2YDL084W YJL171CP46992 396 aa7.46□□□□□ -1.22
SUB2YDL084W RLP24Q07915 199 aaKnown RBP7.46□□□□□ -1.22
SUB2YDL084W GIN4Q12263 1142 aa7.46□□□□□ -1.22
SUB2YDL084W LEU3P08638 886 aa7.45□□□□□ -1.22
SUB2YDL084W FPR3P38911 411 aaKnown RBP7.45□□□□□ -1.22
SUB2YDL084W PLP2Q12017 286 aa7.45□□□□□ -1.22
SUB2YDL084W SUB1P54000 292 aaKnown RBP7.44□□□□□ -1.22
SUB2YDL084W HIF1Q12373 385 aa7.43□□□□□ -1.22
SUB2YDL084W HSP82P02829 709 aaKnown RBP7.42□□□□□ -1.22
SUB2YDL084W DMA2P53924 522 aa7.42□□□□□ -1.22
SUB2YDL084W VPS72Q03388 795 aa7.42□□□□□ -1.22
SUB2YDL084W TOA1P32773 286 aa7.41□□□□□ -1.22
SUB2YDL084W RPS0AP32905 252 aaKnown RBP7.4□□□□□ -1.22
SUB2YDL084W YPR148CQ06523 435 aa7.4□□□□□ -1.22
SUB2YDL084W RLF2Q12495 606 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms