RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C PAF1P38351 445 aa7.65□□□□□ -1.18
SKI2YLR398C SWE1P32944 819 aa7.65□□□□□ -1.19
SKI2YLR398C SEC3P33332 1336 aaKnown RBP7.65□□□□□ -1.19
SKI2YLR398C KRI1P42846 591 aaKnown RBP7.64□□□□□ -1.19
SKI2YLR398C MYO2P19524 1574 aaKnown RBP7.64□□□□□ -1.19
SKI2YLR398C PSH1Q12161 406 aa7.64□□□□□ -1.19
SKI2YLR398C ASF1P32447 279 aa7.63□□□□□ -1.19
SKI2YLR398C TY1B-BRQ12193 1756 aa7.63□□□□□ -1.19
SKI2YLR398C TY1B-GR3Q12316 1755 aa7.63□□□□□ -1.19
SKI2YLR398C TY1B-ORQ92393 1755 aa7.63□□□□□ -1.19
SKI2YLR398C FPR4Q06205 392 aaPredicted RBP7.63□□□□□ -1.19
SKI2YLR398C BPT1P14772 1559 aa7.62□□□□□ -1.19
SKI2YLR398C ESC1Q03661 1658 aaKnown RBP7.61□□□□□ -1.19
SKI2YLR398C MDG1P53885 366 aa7.61□□□□□ -1.19
SKI2YLR398C ESC2Q06340 456 aa7.61□□□□□ -1.19
SKI2YLR398C ULS1Q08562 1619 aa7.61□□□□□ -1.19
SKI2YLR398C JIP3O13555 125 aa7.6□□□□□ -1.19
SKI2YLR398C TY3B-GQ99315 1547 aa7.58□□□□□ -1.2
SKI2YLR398C NAP1P25293 417 aaKnown RBP7.56□□□□□ -1.2
SKI2YLR398C COG8Q04632 607 aa7.56□□□□□ -1.2
SKI2YLR398C DEF1P35732 738 aaKnown RBP7.56□□□□□ -1.2
SKI2YLR398C NOP58Q12499 511 aaKnown RBP7.55□□□□□ -1.2
SKI2YLR398C YPK9Q12697 1472 aa7.55□□□□□ -1.2
SKI2YLR398C TRM732Q03496 1420 aa7.55□□□□□ -1.2
SKI2YLR398C PRS1P32895 427 aaKnown RBP7.54□□□□□ -1.2
SKI2YLR398C RLF2Q12495 606 aa7.54□□□□□ -1.2
SKI2YLR398C YBT1P32386 1661 aa7.54□□□□□ -1.2
SKI2YLR398C TCB2P48231 1178 aa7.53□□□□□ -1.2
SKI2YLR398C PDS5Q04264 1277 aa7.53□□□□□ -1.2
SKI2YLR398C CLB5P30283 435 aa7.53□□□□□ -1.2
SKI2YLR398C TY1B-JR2P47100 1755 aaKnown RBP7.52□□□□□ -1.21
SKI2YLR398C TY1B-ER2Q03619 1755 aa7.52□□□□□ -1.21
SKI2YLR398C TY1B-MR1Q04214 1755 aa7.52□□□□□ -1.21
SKI2YLR398C TY1B-MR2Q04670 1755 aaKnown RBP7.52□□□□□ -1.21
SKI2YLR398C TY1B-LR1Q12088 1755 aaKnown RBP7.52□□□□□ -1.21
SKI2YLR398C TY1B-NL1Q12112 1755 aa7.52□□□□□ -1.21
SKI2YLR398C TY1B-GR1Q12141 1755 aa7.52□□□□□ -1.21
SKI2YLR398C TY1B-BLQ12490 1755 aa7.52□□□□□ -1.21
SKI2YLR398C PAP2P53632 584 aaKnown RBP7.52□□□□□ -1.21
SKI2YLR398C SCC2Q04002 1493 aa7.51□□□□□ -1.21
SKI2YLR398C RAD26P40352 1085 aa7.51□□□□□ -1.21
SKI2YLR398C CFT1Q06632 1357 aaKnown RBP7.5□□□□□ -1.21
SKI2YLR398C ARL1P38116 183 aaKnown RBP7.5□□□□□ -1.21
SKI2YLR398C TPM2P40414 161 aa7.49□□□□□ -1.21
SKI2YLR398C YOR1P53049 1477 aa7.48□□□□□ -1.21
SKI2YLR398C TAF5P38129 798 aa7.48□□□□□ -1.21
SKI2YLR398C SLD2P34252 453 aa7.48□□□□□ -1.21
SKI2YLR398C DAL5P15365 543 aa7.48□□□□□ -1.21
SKI2YLR398C SPT2P06843 333 aaPredicted RBP7.47□□□□□ -1.21
SKI2YLR398C DNA2P38859 1522 aa7.47□□□□□ -1.21
SKI2YLR398C CLB1P24868 471 aa7.47□□□□□ -1.21
SKI2YLR398C RAD2P07276 1031 aa7.46□□□□□ -1.21
SKI2YLR398C RPS0BP46654 252 aaKnown RBP7.46□□□□□ -1.21
SKI2YLR398C YDL144CQ07589 356 aa7.46□□□□□ -1.22
SKI2YLR398C YCF1P39109 1515 aaKnown RBP7.46□□□□□ -1.22
SKI2YLR398C DSN1P40568 576 aa7.46□□□□□ -1.22
SKI2YLR398C BUD21Q08492 214 aaPredicted RBP7.46□□□□□ -1.22
SKI2YLR398C IME2P32581 645 aa7.45□□□□□ -1.22
SKI2YLR398C MIC60P36112 540 aa7.45□□□□□ -1.22
SKI2YLR398C RKR1Q04781 1562 aa7.44□□□□□ -1.22
SKI2YLR398C STH1P32597 1359 aa7.44□□□□□ -1.22
SKI2YLR398C SPT21P35209 758 aa7.44□□□□□ -1.22
SKI2YLR398C KIP3P53086 805 aaKnown RBP7.44□□□□□ -1.22
SKI2YLR398C MYO4P32492 1471 aa7.44□□□□□ -1.22
SKI2YLR398C OSW7P43611 510 aa7.44□□□□□ -1.22
SKI2YLR398C VPS24P36095 224 aaKnown RBP7.43□□□□□ -1.22
SKI2YLR398C VMS1Q04311 632 aaKnown RBP7.43□□□□□ -1.22
SKI2YLR398C GDT1P38301 280 aaPredicted RBP7.43□□□□□ -1.22
SKI2YLR398C IKI3Q06706 1349 aaKnown RBP7.42□□□□□ -1.22
SKI2YLR398C RPN7Q06103 429 aaKnown RBP7.41□□□□□ -1.22
SKI2YLR398C RPO31P04051 1460 aa7.41□□□□□ -1.22
SKI2YLR398C ARP5P53946 755 aa7.41□□□□□ -1.22
SKI2YLR398C PUF6Q04373 656 aaKnown RBP7.41□□□□□ -1.22
SKI2YLR398C CTR9P89105 1077 aa7.4□□□□□ -1.22
SKI2YLR398C SNF7P39929 240 aaKnown RBP7.4□□□□□ -1.23
SKI2YLR398C ENT3P47160 408 aa7.39□□□□□ -1.23
SKI2YLR398C PAN1P32521 1480 aa7.39□□□□□ -1.23
SKI2YLR398C DEP1P31385 405 aa7.39□□□□□ -1.23
SKI2YLR398C KOG1P38873 1557 aa7.38□□□□□ -1.23
SKI2YLR398C SSM4P40318 1319 aa7.38□□□□□ -1.23
SKI2YLR398C YBR287WP38355 427 aa7.38□□□□□ -1.23
SKI2YLR398C CSE4P36012 229 aa7.38□□□□□ -1.23
SKI2YLR398C ISW2Q08773 1120 aa7.38□□□□□ -1.23
SKI2YLR398C RVB2Q12464 471 aaKnown RBP7.38□□□□□ -1.23
SKI2YLR398C ROX1P25042 368 aa7.37□□□□□ -1.23
SKI2YLR398C ENV11P53246 860 aa7.37□□□□□ -1.23
SKI2YLR398C PDR10P51533 1564 aa7.36□□□□□ -1.23
SKI2YLR398C MPP10P47083 593 aaKnown RBP7.36□□□□□ -1.23
SKI2YLR398C RLP24Q07915 199 aaKnown RBP7.36□□□□□ -1.23
SKI2YLR398C SFI1Q12369 946 aa7.36□□□□□ -1.23
SKI2YLR398C IRC20Q06554 1556 aa7.36□□□□□ -1.23
SKI2YLR398C CDC45Q08032 650 aa7.35□□□□□ -1.23
SKI2YLR398C BUD4P47136 1447 aa7.35□□□□□ -1.23
SKI2YLR398C SNQ2P32568 1501 aaKnown RBP7.35□□□□□ -1.23
SKI2YLR398C UTP13Q05946 817 aaKnown RBP7.35□□□□□ -1.23
SKI2YLR398C CBF5P33322 483 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
SKI2YLR398C VPS27P40343 622 aaKnown RBP7.34□□□□□ -1.23
SKI2YLR398C ITC1P53125 1264 aa7.34□□□□□ -1.23
SKI2YLR398C RSC1P53236 928 aa7.34□□□□□ -1.23
SKI2YLR398C RTR1P40084 226 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 142.8 ms