RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C CDC11P32458 415 aa8.47□□□□□ -1.05
HEL1YKR017C FAR11P53917 953 aa8.47□□□□□ -1.05
HEL1YKR017C GEF1P37020 779 aa8.46□□□□□ -1.05
HEL1YKR017C RPT2P40327 437 aaKnown RBP8.46□□□□□ -1.05
HEL1YKR017C HOS4P40480 1083 aa8.46□□□□□ -1.06
HEL1YKR017C NOP8Q08287 484 aaPredicted RBP8.46□□□□□ -1.06
HEL1YKR017C PEA2P40091 420 aa8.45□□□□□ -1.06
HEL1YKR017C YJR008WP47085 338 aa8.45□□□□□ -1.06
HEL1YKR017C SEC20P28791 383 aa8.44□□□□□ -1.06
HEL1YKR017C TY4A-JP47023 414 aa8.44□□□□□ -1.06
HEL1YKR017C NOP7P53261 605 aaKnown RBP8.44□□□□□ -1.06
HEL1YKR017C PDR1P12383 1068 aa8.43□□□□□ -1.06
HEL1YKR017C NNF2P53253 936 aa8.43□□□□□ -1.06
HEL1YKR017C ETT1Q08421 412 aaKnown RBP8.43□□□□□ -1.06
HEL1YKR017C ZDS1P50111 915 aaKnown RBP8.43□□□□□ -1.06
HEL1YKR017C SSF1P38789 453 aaPredicted RBP8.42□□□□□ -1.06
HEL1YKR017C NST1P53935 1240 aa8.42□□□□□ -1.06
HEL1YKR017C BRE1Q07457 700 aaKnown RBP8.42□□□□□ -1.06
HEL1YKR017C PET111P08468 800 aa8.4□□□□□ -1.07
HEL1YKR017C MCM1P11746 286 aa8.4□□□□□ -1.07
HEL1YKR017C AIM21P40563 679 aa8.4□□□□□ -1.07
HEL1YKR017C SEC9P40357 651 aa8.39□□□□□ -1.07
HEL1YKR017C RAD2P07276 1031 aa8.38□□□□□ -1.07
HEL1YKR017C DOS2P54858 310 aa8.37□□□□□ -1.07
HEL1YKR017C APL5Q08951 932 aaKnown RBP8.37□□□□□ -1.07
HEL1YKR017C CFT2Q12102 859 aaPredicted RBP8.37□□□□□ -1.07
HEL1YKR017C SPC42P36094 363 aa8.36□□□□□ -1.07
HEL1YKR017C RCF1Q03713 159 aa8.36□□□□□ -1.07
HEL1YKR017C SEC3P33332 1336 aaKnown RBP8.36□□□□□ -1.07
HEL1YKR017C DJP1P40564 432 aa8.34□□□□□ -1.07
HEL1YKR017C PKH1Q03407 766 aa8.34□□□□□ -1.07
HEL1YKR017C MEH1Q02205 184 aa8.34□□□□□ -1.08
HEL1YKR017C GIR2Q03768 265 aaPredicted RBP8.34□□□□□ -1.08
HEL1YKR017C PSK2Q08217 1101 aa8.34□□□□□ -1.08
HEL1YKR017C MSH4P40965 878 aaPredicted RBP8.33□□□□□ -1.08
HEL1YKR017C MTR4P47047 1073 aaKnown RBP8.33□□□□□ -1.08
HEL1YKR017C YDR341CQ05506 607 aaKnown RBP8.33□□□□□ -1.08
HEL1YKR017C GAL11P19659 1081 aa8.32□□□□□ -1.08
HEL1YKR017C CBF5P33322 483 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
HEL1YKR017C RRP14P36080 434 aaKnown RBP8.31□□□□□ -1.08
HEL1YKR017C LEM3P42838 414 aa8.31□□□□□ -1.08
HEL1YKR017C CLC1P17891 233 aa8.3□□□□□ -1.08
HEL1YKR017C TY1B-AO13527 1196 aaKnown RBP8.3□□□□□ -1.08
HEL1YKR017C TAN1P53072 289 aaPredicted RBP8.3□□□□□ -1.08
HEL1YKR017C SSA4P22202 642 aaKnown RBP8.29□□□□□ -1.08
HEL1YKR017C RAD51P25454 400 aa8.29□□□□□ -1.08
HEL1YKR017C SAP190P36123 1033 aa8.29□□□□□ -1.08
HEL1YKR017C SYH1Q02875 849 aaKnown RBP8.29□□□□□ -1.08
HEL1YKR017C YLL054CQ12244 843 aa8.29□□□□□ -1.08
HEL1YKR017C LTV1P34078 463 aa8.28□□□□□ -1.08
HEL1YKR017C SEC27P41811 889 aaKnown RBP8.28□□□□□ -1.08
HEL1YKR017C CEF1Q03654 590 aaPredicted RBP8.28□□□□□ -1.08
HEL1YKR017C RPN7Q06103 429 aaKnown RBP8.28□□□□□ -1.08
HEL1YKR017C ECM16Q04217 1267 aaKnown RBP8.27□□□□□ -1.08
HEL1YKR017C TAF1P46677 1066 aa8.27□□□□□ -1.09
HEL1YKR017C GDE1Q02979 1223 aa8.27□□□□□ -1.09
HEL1YKR017C YLR257WQ06146 321 aaKnown RBP8.27□□□□□ -1.09
HEL1YKR017C CLF1Q12309 687 aaPredicted RBP8.27□□□□□ -1.09
HEL1YKR017C IMH1Q06704 911 aaKnown RBP8.26□□□□□ -1.09
HEL1YKR017C AIM20P40451 204 aa8.25□□□□□ -1.09
HEL1YKR017C MPE1P35728 441 aaKnown RBP8.24□□□□□ -1.09
HEL1YKR017C PIM1P36775 1133 aa8.24□□□□□ -1.09
HEL1YKR017C NPR3P38742 1146 aa8.24□□□□□ -1.09
HEL1YKR017C SLX8P40072 274 aa8.24□□□□□ -1.09
HEL1YKR017C NOP56Q12460 504 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
HEL1YKR017C MSH3P25336 1018 aa8.24□□□□□ -1.09
HEL1YKR017C NMD3P38861 518 aaKnown RBP8.24□□□□□ -1.09
HEL1YKR017C VID30P53076 958 aa8.24□□□□□ -1.09
HEL1YKR017C SUP35P05453 685 aaKnown RBP8.23□□□□□ -1.09
HEL1YKR017C RSC8P43609 557 aaKnown RBP8.23□□□□□ -1.09
HEL1YKR017C VPS5Q92331 675 aa8.22□□□□□ -1.09
HEL1YKR017C CKB1P43639 278 aa8.21□□□□□ -1.09
HEL1YKR017C RPA135P22138 1203 aaKnown RBP8.21□□□□□ -1.1
HEL1YKR017C DEP1P31385 405 aa8.21□□□□□ -1.1
HEL1YKR017C BYE1P36106 594 aa8.21□□□□□ -1.1
HEL1YKR017C YMR124WP39523 943 aaKnown RBP8.21□□□□□ -1.1
HEL1YKR017C UBX5Q06682 500 aa8.21□□□□□ -1.1
HEL1YKR017C SIC1P38634 284 aa8.2□□□□□ -1.1
HEL1YKR017C MET10P39692 1035 aa8.2□□□□□ -1.1
HEL1YKR017C ALD3P54114 506 aa8.2□□□□□ -1.1
HEL1YKR017C PRP3Q03338 469 aaPredicted RBP8.2□□□□□ -1.1
HEL1YKR017C TY4B-PA0A0B7P3V8 1104 aa8.19□□□□□ -1.1
HEL1YKR017C YGL081WP53156 320 aa8.19□□□□□ -1.1
HEL1YKR017C HEL2Q05580 639 aaKnown RBP8.19□□□□□ -1.1
HEL1YKR017C MFT1P33441 392 aaKnown RBP8.18□□□□□ -1.1
HEL1YKR017C POL5P39985 1022 aaKnown RBP8.18□□□□□ -1.1
HEL1YKR017C GGA1Q06336 557 aa8.18□□□□□ -1.1
HEL1YKR017C BLI1P35727 113 aa8.17□□□□□ -1.1
HEL1YKR017C NOP58Q12499 511 aaKnown RBP8.17□□□□□ -1.1
HEL1YKR017C RPL5P26321 297 aaKnown RBP8.16□□□□□ -1.1
HEL1YKR017C ERP2P39704 215 aa8.16□□□□□ -1.1
HEL1YKR017C RRP15Q06511 250 aaPredicted RBP8.16□□□□□ -1.1
HEL1YKR017C YPR172WQ06608 200 aa8.16□□□□□ -1.1
HEL1YKR017C HSP42Q12329 375 aa8.16□□□□□ -1.1
HEL1YKR017C OPI1P21957 404 aa8.15□□□□□ -1.1
HEL1YKR017C PAM1P37304 830 aaKnown RBP8.15□□□□□ -1.1
HEL1YKR017C NOC2P39744 710 aaKnown RBP8.15□□□□□ -1.1
HEL1YKR017C VPS27P40343 622 aaKnown RBP8.15□□□□□ -1.1
HEL1YKR017C HOS2P53096 452 aaPredicted RBP8.15□□□□□ -1.1
HEL1YKR017C YDL121CQ07541 149 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms