RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C RQC2Q12532 1038 aaKnown RBP12.03□□□□□ -0.48
HEL1YKR017C BFR2Q06631 534 aaKnown RBP11.32□□□□□ -0.6
HEL1YKR017C TAF7Q05021 590 aa11.14□□□□□ -0.63
HEL1YKR017C TFA1P36100 482 aa10.65□□□□□ -0.7
HEL1YKR017C URN1Q06525 465 aaKnown RBP10.57□□□□□ -0.72
HEL1YKR017C DRS1P32892 752 aaKnown RBP10.56□□□□□ -0.72
HEL1YKR017C SIS2P36024 562 aa10.02□□□□□ -0.81
HEL1YKR017C EBP2P36049 427 aaKnown RBP9.93□□□□□ -0.82
HEL1YKR017C CAB3P36076 571 aa9.87□□□□□ -0.83
HEL1YKR017C YRB30P53107 440 aaPredicted RBP9.82□□□□□ -0.84
HEL1YKR017C YFR016CP43597 1233 aaKnown RBP9.79□□□□□ -0.84
HEL1YKR017C NAP1P25293 417 aaKnown RBP9.77□□□□□ -0.84
HEL1YKR017C LEO1P38439 464 aa9.69□□□□□ -0.86
HEL1YKR017C IOC4Q04213 475 aa9.67□□□□□ -0.86
HEL1YKR017C RPS0BP46654 252 aaKnown RBP9.63□□□□□ -0.87
HEL1YKR017C NOP2P40991 618 aaKnown RBP9.61□□□□□ -0.87
HEL1YKR017C DIP2Q12220 943 aaPredicted RBP9.6□□□□□ -0.87
HEL1YKR017C AVT3P36062 692 aa9.58□□□□□ -0.88
HEL1YKR017C AIM44Q99299 758 aa9.58□□□□□ -0.88
HEL1YKR017C KRI1P42846 591 aaKnown RBP9.56□□□□□ -0.88
HEL1YKR017C DMA1P38823 416 aa9.48□□□□□ -0.89
HEL1YKR017C MTC1P47018 478 aaKnown RBP9.47□□□□□ -0.89
HEL1YKR017C MNN4P36044 1178 aa9.41□□□□□ -0.9
HEL1YKR017C TOP1P04786 769 aa9.29□□□□□ -0.92
HEL1YKR017C SNU71P53207 620 aaKnown RBP9.29□□□□□ -0.92
HEL1YKR017C IFH1P39520 1085 aa9.28□□□□□ -0.92
HEL1YKR017C CWC22P53333 577 aaKnown RBP9.23□□□□□ -0.93
HEL1YKR017C ORC1P54784 914 aaPredicted RBP9.17□□□□□ -0.94
HEL1YKR017C DEF1P35732 738 aaKnown RBP9.16□□□□□ -0.94
HEL1YKR017C PSH1Q12161 406 aa9.1□□□□□ -0.95
HEL1YKR017C MDG1P53885 366 aa9.09□□□□□ -0.95
HEL1YKR017C YPR148CQ06523 435 aa9.08□□□□□ -0.96
HEL1YKR017C RLP24Q07915 199 aaKnown RBP9.06□□□□□ -0.96
HEL1YKR017C ENV11P53246 860 aa8.96□□□□□ -0.98
HEL1YKR017C GIN4Q12263 1142 aa8.93□□□□□ -0.98
HEL1YKR017C NUG1P40010 520 aaKnown RBP8.91□□□□□ -0.98
HEL1YKR017C HIF1Q12373 385 aa8.91□□□□□ -0.98
HEL1YKR017C TOA1P32773 286 aa8.88□□□□□ -0.99
HEL1YKR017C FPR3P38911 411 aaKnown RBP8.88□□□□□ -0.99
HEL1YKR017C HSP82P02829 709 aaKnown RBP8.87□□□□□ -0.99
HEL1YKR017C SPT2P06843 333 aaPredicted RBP8.87□□□□□ -0.99
HEL1YKR017C NSR1P27476 414 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
HEL1YKR017C SWE1P32944 819 aa8.87□□□□□ -0.99
HEL1YKR017C BRL1P38770 471 aa8.87□□□□□ -0.99
HEL1YKR017C PLP2Q12017 286 aa8.87□□□□□ -0.99
HEL1YKR017C RPS0AP32905 252 aaKnown RBP8.85□□□□□ -0.99
HEL1YKR017C RPN1P38764 993 aaKnown RBP8.85□□□□□ -0.99
HEL1YKR017C NOP53Q12080 455 aaKnown RBP8.85□□□□□ -0.99
HEL1YKR017C TCB2P48231 1178 aa8.84□□□□□ -0.99
HEL1YKR017C LEU3P08638 886 aa8.83□□□□□ -1
HEL1YKR017C RLF2Q12495 606 aa8.83□□□□□ -1
HEL1YKR017C SUB1P54000 292 aaKnown RBP8.82□□□□□ -1
HEL1YKR017C RSE1Q04693 1361 aaKnown RBP8.79□□□□□ -1
HEL1YKR017C DMA2P53924 522 aa8.79□□□□□ -1
HEL1YKR017C VPS72Q03388 795 aa8.79□□□□□ -1
HEL1YKR017C ABP1P15891 592 aaKnown RBP8.78□□□□□ -1
HEL1YKR017C ENP1P38333 483 aaKnown RBP8.77□□□□□ -1.01
HEL1YKR017C SPT7P35177 1332 aa8.76□□□□□ -1.01
HEL1YKR017C TIF4632P39936 914 aaKnown RBP8.75□□□□□ -1.01
HEL1YKR017C NHA1Q99271 985 aa8.75□□□□□ -1.01
HEL1YKR017C ASF1P32447 279 aa8.74□□□□□ -1.01
HEL1YKR017C TLG1Q03322 224 aa8.73□□□□□ -1.01
HEL1YKR017C SAS10Q12136 610 aaPredicted RBP8.73□□□□□ -1.01
HEL1YKR017C SSA1P10591 642 aaKnown RBP8.72□□□□□ -1.01
HEL1YKR017C SSA2P10592 639 aaKnown RBP8.72□□□□□ -1.01
HEL1YKR017C QCR6P00127 147 aa8.7□□□□□ -1.02
HEL1YKR017C SPT16P32558 1035 aaKnown RBP8.7□□□□□ -1.02
HEL1YKR017C RNA1P11745 407 aaKnown RBP8.69□□□□□ -1.02
HEL1YKR017C FUN12P39730 1002 aaKnown RBP8.69□□□□□ -1.02
HEL1YKR017C TPO2P53283 614 aa8.69□□□□□ -1.02
HEL1YKR017C BRN1P38170 754 aa8.68□□□□□ -1.02
HEL1YKR017C ATG36P46983 293 aa8.68□□□□□ -1.02
HEL1YKR017C MPP10P47083 593 aaKnown RBP8.67□□□□□ -1.02
HEL1YKR017C RIX1P38883 763 aaPredicted RBP8.66□□□□□ -1.02
HEL1YKR017C FPR4Q06205 392 aaPredicted RBP8.65□□□□□ -1.02
HEL1YKR017C YGR130CP53278 816 aa8.62□□□□□ -1.03
HEL1YKR017C INO80P53115 1489 aa8.61□□□□□ -1.03
HEL1YKR017C OSW7P43611 510 aa8.61□□□□□ -1.03
HEL1YKR017C PIL1P53252 339 aaKnown RBP8.61□□□□□ -1.03
HEL1YKR017C GRX3Q03835 250 aa8.61□□□□□ -1.03
HEL1YKR017C YNL011CP53980 444 aa8.6□□□□□ -1.03
HEL1YKR017C ISW1P38144 1129 aa8.59□□□□□ -1.03
HEL1YKR017C RTS3P53289 263 aa8.59□□□□□ -1.03
HEL1YKR017C LAM6Q08001 693 aa8.56□□□□□ -1.04
HEL1YKR017C YTA7P40340 1379 aa8.56□□□□□ -1.04
HEL1YKR017C NMD2P38798 1089 aaKnown RBP8.55□□□□□ -1.04
HEL1YKR017C SPT21P35209 758 aa8.54□□□□□ -1.04
HEL1YKR017C SPC110P32380 944 aa8.53□□□□□ -1.04
HEL1YKR017C KIP3P53086 805 aaKnown RBP8.53□□□□□ -1.04
HEL1YKR017C NAB3P38996 802 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
HEL1YKR017C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
HEL1YKR017C YMR196WQ04336 1088 aa8.53□□□□□ -1.04
HEL1YKR017C YSH1Q06224 779 aaPredicted RBP8.53□□□□□ -1.04
HEL1YKR017C BUD21Q08492 214 aaPredicted RBP8.52□□□□□ -1.05
HEL1YKR017C TAF13P11747 167 aa8.51□□□□□ -1.05
HEL1YKR017C SSP1P38871 571 aa8.51□□□□□ -1.05
HEL1YKR017C DAL5P15365 543 aa8.49□□□□□ -1.05
HEL1YKR017C VPS4P52917 437 aa8.49□□□□□ -1.05
HEL1YKR017C HSC82P15108 705 aaKnown RBP8.49□□□□□ -1.05
HEL1YKR017C YML020WQ03722 664 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms