RNA–Protein interactions for RNA: YIL115C

NUP159, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP159, Length 4,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP159	YIL115C	HSP82	P02829	709 aa	Known RBP	4.27	□□□□□ -1.73
NUP159	YIL115C	GDT1	P38301	280 aa	Predicted RBP	4.26	□□□□□ -1.73
NUP159	YIL115C	ARP5	P53946	755 aa		4.26	□□□□□ -1.73
NUP159	YIL115C	SFI1	Q12369	946 aa		4.26	□□□□□ -1.73
NUP159	YIL115C	LTV1	P34078	463 aa		4.25	□□□□□ -1.73
NUP159	YIL115C	SLN1	P39928	1220 aa	Predicted RBP	4.25	□□□□□ -1.73
NUP159	YIL115C	PAN1	P32521	1480 aa		4.25	□□□□□ -1.73
NUP159	YIL115C	CKB1	P43639	278 aa		4.25	□□□□□ -1.73
NUP159	YIL115C	OPY1	P38271	328 aa		4.24	□□□□□ -1.73
NUP159	YIL115C	UTP13	Q05946	817 aa	Known RBP	4.24	□□□□□ -1.73
NUP159	YIL115C	CDC45	Q08032	650 aa		4.24	□□□□□ -1.73
NUP159	YIL115C	YDL144C	Q07589	356 aa		4.24	□□□□□ -1.73
NUP159	YIL115C	NOP53	Q12080	455 aa	Known RBP	4.24	□□□□□ -1.73
NUP159	YIL115C	STH1	P32597	1359 aa		4.23	□□□□□ -1.73
NUP159	YIL115C	MSH3	P25336	1018 aa		4.23	□□□□□ -1.73
NUP159	YIL115C	RNT1	Q02555	471 aa		4.23	□□□□□ -1.73
NUP159	YIL115C	RPN1	P38764	993 aa	Known RBP	4.23	□□□□□ -1.73
NUP159	YIL115C	VPS27	P40343	622 aa	Known RBP	4.23	□□□□□ -1.73
NUP159	YIL115C	PCT1	P13259	424 aa		4.23	□□□□□ -1.73
NUP159	YIL115C	GRX3	Q03835	250 aa		4.23	□□□□□ -1.73
NUP159	YIL115C	TOP1	P04786	769 aa		4.23	□□□□□ -1.73
NUP159	YIL115C	TCD1	P38756	429 aa		4.23	□□□□□ -1.73
NUP159	YIL115C	MTC1	P47018	478 aa	Known RBP	4.23	□□□□□ -1.73
NUP159	YIL115C	ITC1	P53125	1264 aa		4.23	□□□□□ -1.73
NUP159	YIL115C	SPC110	P32380	944 aa		4.22	□□□□□ -1.73
NUP159	YIL115C	RSC1	P53236	928 aa		4.22	□□□□□ -1.73
NUP159	YIL115C	DAL5	P15365	543 aa		4.22	□□□□□ -1.73
NUP159	YIL115C	RVB2	Q12464	471 aa	Known RBP	4.22	□□□□□ -1.73
NUP159	YIL115C	LCD1	Q04377	747 aa		4.21	□□□□□ -1.73
NUP159	YIL115C	MDM38	Q08179	573 aa		4.21	□□□□□ -1.73
NUP159	YIL115C	SPP41	P38904	1435 aa		4.21	□□□□□ -1.73
NUP159	YIL115C	SSM4	P40318	1319 aa		4.21	□□□□□ -1.74
NUP159	YIL115C	MMS22	Q06164	1454 aa		4.21	□□□□□ -1.74
NUP159	YIL115C	KIP3	P53086	805 aa	Known RBP	4.21	□□□□□ -1.74
NUP159	YIL115C	VPS60	Q03390	229 aa		4.21	□□□□□ -1.74
NUP159	YIL115C	OSW7	P43611	510 aa		4.21	□□□□□ -1.74
NUP159	YIL115C	TCB3	Q03640	1545 aa	Known RBP	4.21	□□□□□ -1.74
NUP159	YIL115C	MSP1	P28737	362 aa		4.21	□□□□□ -1.74
NUP159	YIL115C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
NUP159	YIL115C	HOS3	Q02959	697 aa	Known RBP	4.19	□□□□□ -1.74
NUP159	YIL115C	PUF6	Q04373	656 aa	Known RBP	4.19	□□□□□ -1.74
NUP159	YIL115C	GIN4	Q12263	1142 aa		4.19	□□□□□ -1.74
NUP159	YIL115C	SMC4	Q12267	1418 aa		4.19	□□□□□ -1.74
NUP159	YIL115C	TAF5	P38129	798 aa		4.18	□□□□□ -1.74
NUP159	YIL115C	BDP1	P46678	594 aa		4.18	□□□□□ -1.74
NUP159	YIL115C	PLP2	Q12017	286 aa		4.18	□□□□□ -1.74
NUP159	YIL115C	SES1	P07284	462 aa	Known RBP	4.18	□□□□□ -1.74
NUP159	YIL115C	YNL011C	P53980	444 aa		4.18	□□□□□ -1.74
NUP159	YIL115C	BUD4	P47136	1447 aa		4.18	□□□□□ -1.74
NUP159	YIL115C	SCT1	P32784	759 aa		4.18	□□□□□ -1.74
NUP159	YIL115C	RIM101	P33400	625 aa		4.18	□□□□□ -1.74
NUP159	YIL115C	MGA2	P40578	1113 aa		4.18	□□□□□ -1.74
NUP159	YIL115C	ECM16	Q04217	1267 aa	Known RBP	4.18	□□□□□ -1.74
NUP159	YIL115C	VMS1	Q04311	632 aa	Known RBP	4.17	□□□□□ -1.74
NUP159	YIL115C	YSH1	Q06224	779 aa	Predicted RBP	4.17	□□□□□ -1.74
NUP159	YIL115C	ETT1	Q08421	412 aa	Known RBP	4.17	□□□□□ -1.74
NUP159	YIL115C	BUD21	Q08492	214 aa	Predicted RBP	4.17	□□□□□ -1.74
NUP159	YIL115C	RPG1	P38249	964 aa	Known RBP	4.17	□□□□□ -1.74
NUP159	YIL115C	PRP31	P49704	494 aa	Predicted RBP	4.17	□□□□□ -1.74
NUP159	YIL115C	PUS1	Q12211	544 aa	Known RBP	4.17	□□□□□ -1.74
NUP159	YIL115C	CYC8	P14922	966 aa		4.16	□□□□□ -1.74
NUP159	YIL115C	SFB2	P53953	876 aa		4.16	□□□□□ -1.74
NUP159	YIL115C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
NUP159	YIL115C	YTA7	P40340	1379 aa		4.16	□□□□□ -1.74
NUP159	YIL115C	RSM25	P40496	264 aa		4.16	□□□□□ -1.74
NUP159	YIL115C	RUD3	Q12234	484 aa	Known RBP	4.16	□□□□□ -1.74
NUP159	YIL115C	NOT3	P06102	836 aa	Known RBP	4.16	□□□□□ -1.74
NUP159	YIL115C	PSE1	P32337	1089 aa	Known RBP	4.16	□□□□□ -1.74
NUP159	YIL115C	MPP10	P47083	593 aa	Known RBP	4.16	□□□□□ -1.74
NUP159	YIL115C	NST1	P53935	1240 aa		4.16	□□□□□ -1.74
NUP159	YIL115C	SRS2	P12954	1174 aa		4.16	□□□□□ -1.74
NUP159	YIL115C	ZUO1	P32527	433 aa	Known RBP	4.16	□□□□□ -1.74
NUP159	YIL115C	RPS0A	P32905	252 aa	Known RBP	4.16	□□□□□ -1.74
NUP159	YIL115C	RRP14	P36080	434 aa	Known RBP	4.16	□□□□□ -1.74
NUP159	YIL115C	HOS4	P40480	1083 aa		4.16	□□□□□ -1.74
NUP159	YIL115C	SWH1	P35845	1188 aa		4.15	□□□□□ -1.75
NUP159	YIL115C	DID4	P36108	232 aa		4.15	□□□□□ -1.75
NUP159	YIL115C	RFC1	P38630	861 aa	Known RBP	4.15	□□□□□ -1.75
NUP159	YIL115C	JJJ1	P53863	590 aa		4.15	□□□□□ -1.75
NUP159	YIL115C	TRM732	Q03496	1420 aa		4.15	□□□□□ -1.75
NUP159	YIL115C	MCM2	P29469	868 aa		4.15	□□□□□ -1.75
NUP159	YIL115C	TOM71	P38825	639 aa	Known RBP	4.15	□□□□□ -1.75
NUP159	YIL115C	RTR1	P40084	226 aa	Predicted RBP	4.15	□□□□□ -1.75
NUP159	YIL115C	INO80	P53115	1489 aa		4.15	□□□□□ -1.75
NUP159	YIL115C	MHP1	P43638	1398 aa		4.15	□□□□□ -1.75
NUP159	YIL115C	TEA1	P47988	759 aa		4.14	□□□□□ -1.75
NUP159	YIL115C	IOC4	Q04213	475 aa		4.14	□□□□□ -1.75
NUP159	YIL115C	SPT6	P23615	1451 aa	Known RBP	4.14	□□□□□ -1.75
NUP159	YIL115C	SAP1	P39955	897 aa	Known RBP	4.14	□□□□□ -1.75
NUP159	YIL115C	PIL1	P53252	339 aa	Known RBP	4.14	□□□□□ -1.75
NUP159	YIL115C	TIM50	Q02776	476 aa		4.14	□□□□□ -1.75
NUP159	YIL115C	BIK1	P11709	440 aa		4.14	□□□□□ -1.75
NUP159	YIL115C	CSE4	P36012	229 aa		4.14	□□□□□ -1.75
NUP159	YIL115C	TSR2	Q06672	205 aa	Known RBP	4.14	□□□□□ -1.75
NUP159	YIL115C	PUP2	P32379	260 aa		4.13	□□□□□ -1.75
NUP159	YIL115C	ENT3	P47160	408 aa		4.13	□□□□□ -1.75
NUP159	YIL115C	TAN1	P53072	289 aa	Predicted RBP	4.13	□□□□□ -1.75
NUP159	YIL115C	MNR2	P35724	969 aa		4.13	□□□□□ -1.75
NUP159	YIL115C	LAM1	P38851	1228 aa		4.13	□□□□□ -1.75
NUP159	YIL115C	YGL140C	P53120	1219 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms