RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C OPT1P40897 799 aa5.32□□□□□ -1.56
CCS1YMR038C HXT16P47185 567 aa5.32□□□□□ -1.56
CCS1YMR038C LIF1P53150 421 aa5.32□□□□□ -1.56
CCS1YMR038C PNG1Q02890 363 aa5.32□□□□□ -1.56
CCS1YMR038C YDR514CQ04408 483 aa5.32□□□□□ -1.56
CCS1YMR038C MYO5Q04439 1219 aaKnown RBP5.32□□□□□ -1.56
CCS1YMR038C HCR1Q05775 265 aaKnown RBP5.32□□□□□ -1.56
CCS1YMR038C NKP2Q06162 153 aa5.32□□□□□ -1.56
CCS1YMR038C PIG1Q06216 648 aa5.32□□□□□ -1.56
CCS1YMR038C RSC3Q06639 885 aa5.32□□□□□ -1.56
CCS1YMR038C REH1Q06709 432 aa5.32□□□□□ -1.56
CCS1YMR038C NTG2Q08214 380 aa5.32□□□□□ -1.56
CCS1YMR038C RIM20Q12033 661 aa5.32□□□□□ -1.56
CCS1YMR038C HAL9Q12180 1030 aa5.32□□□□□ -1.56
CCS1YMR038C NPC2Q12408 173 aa5.32□□□□□ -1.56
CCS1YMR038C PGA3Q12746 312 aaKnown RBP5.32□□□□□ -1.56
CCS1YMR038C MAK31P23059 88 aa5.31□□□□□ -1.56
CCS1YMR038C PWP2P25635 923 aaKnown RBP5.31□□□□□ -1.56
CCS1YMR038C MTC2P34246 357 aa5.31□□□□□ -1.56
CCS1YMR038C DRE2P36152 348 aa5.31□□□□□ -1.56
CCS1YMR038C CTF8P38877 133 aa5.31□□□□□ -1.56
CCS1YMR038C MMF1P40185 145 aaKnown RBP5.31□□□□□ -1.56
CCS1YMR038C SDP1P40479 209 aa5.31□□□□□ -1.56
CCS1YMR038C TAF1P46677 1066 aa5.31□□□□□ -1.56
CCS1YMR038C PTA1Q01329 785 aaPredicted RBP5.31□□□□□ -1.56
CCS1YMR038C MDM1Q01846 1127 aa5.31□□□□□ -1.56
CCS1YMR038C SLU7Q02775 382 aaKnown RBP5.31□□□□□ -1.56
CCS1YMR038C UGO1Q03327 502 aa5.31□□□□□ -1.56
CCS1YMR038C POB3Q04636 552 aaKnown RBP5.31□□□□□ -1.56
CCS1YMR038C SPN1Q06505 410 aaPredicted RBP5.31□□□□□ -1.56
CCS1YMR038C ESC8Q08119 714 aa5.31□□□□□ -1.56
CCS1YMR038C CDC9P04819 755 aa5.3□□□□□ -1.56
CCS1YMR038C MBR1P23493 339 aa5.3□□□□□ -1.56
CCS1YMR038C SED4P25365 1065 aa5.3□□□□□ -1.56
CCS1YMR038C PUP3P25451 205 aaKnown RBP5.3□□□□□ -1.56
CCS1YMR038C IMP2'P32351 346 aa5.3□□□□□ -1.56
CCS1YMR038C PEX6P33760 1030 aa5.3□□□□□ -1.56
CCS1YMR038C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
CCS1YMR038C AAP1P37898 856 aaKnown RBP5.3□□□□□ -1.56
CCS1YMR038C CRG1P38892 291 aaRIP-Chip data5.3□□□□□ -1.56not detected
CCS1YMR038C BUD16P39988 312 aa5.3□□□□□ -1.56
CCS1YMR038C SAD1P43589 448 aa5.3□□□□□ -1.56
CCS1YMR038C YLR455WQ06188 304 aa5.3□□□□□ -1.56
CCS1YMR038C TFC6Q06339 672 aa5.3□□□□□ -1.56
CCS1YMR038C YOR022CQ12204 715 aa5.3□□□□□ -1.56
CCS1YMR038C YBR182C-AQ8TGU6 64 aa5.3□□□□□ -1.56
CCS1YMR038C BEM2P39960 2167 aaKnown RBP5.3□□□□□ -1.56
CCS1YMR038C SES1P07284 462 aaKnown RBP5.29□□□□□ -1.56
CCS1YMR038C RPL40AP0CH08 128 aaKnown RBP5.29□□□□□ -1.56
CCS1YMR038C RPL40BP0CH09 128 aaKnown RBP5.29□□□□□ -1.56
CCS1YMR038C STE11P23561 717 aa5.29□□□□□ -1.56
CCS1YMR038C VBA3P25594 458 aa5.29□□□□□ -1.56
CCS1YMR038C MSS51P32335 436 aa5.29□□□□□ -1.56
CCS1YMR038C DSS1P39112 969 aa5.29□□□□□ -1.56
CCS1YMR038C YTA12P40341 825 aa5.29□□□□□ -1.56
CCS1YMR038C ASE1P50275 885 aa5.29□□□□□ -1.56
CCS1YMR038C EXG2P52911 562 aa5.29□□□□□ -1.56
CCS1YMR038C PUS2P53167 370 aa5.29□□□□□ -1.56
CCS1YMR038C MFB1Q04922 465 aa5.29□□□□□ -1.56
CCS1YMR038C DSE3Q08729 430 aa5.29□□□□□ -1.56
CCS1YMR038C CLF1Q12309 687 aaPredicted RBP5.29□□□□□ -1.56
CCS1YMR038C YOR111WQ99210 232 aa5.29□□□□□ -1.56
CCS1YMR038C RIF1P29539 1916 aa5.29□□□□□ -1.56
CCS1YMR038C FMP27Q06179 2628 aa5.28□□□□□ -1.56
CCS1YMR038C SNF1P06782 633 aaKnown RBP5.28□□□□□ -1.56
CCS1YMR038C VAS1P07806 1104 aaKnown RBP5.28□□□□□ -1.56
CCS1YMR038C RPL8AP17076 256 aaKnown RBP5.28□□□□□ -1.56
CCS1YMR038C KIN82P25341 720 aa5.28□□□□□ -1.56
CCS1YMR038C CTS1P29029 562 aa5.28□□□□□ -1.56
CCS1YMR038C SEC21P32074 935 aaKnown RBP5.28□□□□□ -1.56
CCS1YMR038C MPT5P39016 859 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
CCS1YMR038C MOB1P40484 314 aa5.28□□□□□ -1.56
CCS1YMR038C MNN10P50108 393 aaKnown RBP5.28□□□□□ -1.56
CCS1YMR038C VIP1Q06685 1146 aaKnown RBP5.28□□□□□ -1.56
CCS1YMR038C THI21Q08975 551 aa5.28□□□□□ -1.56
CCS1YMR038C GSY1P23337 708 aa5.27□□□□□ -1.57
CCS1YMR038C KAR4P25583 335 aa5.27□□□□□ -1.57
CCS1YMR038C BUD2P33314 1104 aa5.27□□□□□ -1.57
CCS1YMR038C TEL1P38110 2787 aa5.27□□□□□ -1.57
CCS1YMR038C SLX1P38324 304 aa5.27□□□□□ -1.57
CCS1YMR038C YHR078WP38799 552 aa5.27□□□□□ -1.57
CCS1YMR038C MNN1P39106 762 aa5.27□□□□□ -1.57
CCS1YMR038C HMF1P40037 129 aaKnown RBP5.27□□□□□ -1.57
CCS1YMR038C TPM2P40414 161 aa5.27□□□□□ -1.57
CCS1YMR038C RLP7P40693 322 aaKnown RBP5.27□□□□□ -1.57
CCS1YMR038C CAF16P43569 289 aa5.27□□□□□ -1.57
CCS1YMR038C YDR338CQ05497 695 aa5.27□□□□□ -1.57
CCS1YMR038C LAS17Q12446 633 aa5.27□□□□□ -1.57
CCS1YMR038C SRD1P09007 221 aa5.26□□□□□ -1.57
CCS1YMR038C UBC1P21734 215 aaKnown RBP5.26□□□□□ -1.57
CCS1YMR038C ADK2P26364 225 aa5.26□□□□□ -1.57
CCS1YMR038C STO1P34160 861 aaKnown RBP5.26□□□□□ -1.57
CCS1YMR038C UBP11P36026 717 aa5.26□□□□□ -1.57
CCS1YMR038C SAP190P36123 1033 aa5.26□□□□□ -1.57
CCS1YMR038C TVP38P36164 337 aa5.26□□□□□ -1.57
CCS1YMR038C SHM2P37291 469 aaKnown RBP5.26□□□□□ -1.57
CCS1YMR038C SUL1P38359 859 aa5.26□□□□□ -1.57
CCS1YMR038C STB5P38699 743 aa5.26□□□□□ -1.57
CCS1YMR038C SET5P38890 526 aaKnown RBP5.26□□□□□ -1.57
CCS1YMR038C MSS4P38994 779 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms