RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W DJP1P40564 432 aa2.28□□□□□ -2.04
SIR4YDR227W BIR1P47134 954 aa2.28□□□□□ -2.04
SIR4YDR227W CTR1P49573 406 aa2.28□□□□□ -2.04
SIR4YDR227W PIL1P53252 339 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W ALF1P53904 254 aa2.28□□□□□ -2.04
SIR4YDR227W VAC7P53950 1165 aa2.28□□□□□ -2.04
SIR4YDR227W UBP16Q02863 499 aa2.28□□□□□ -2.04
SIR4YDR227W GIS4Q04233 774 aa2.28□□□□□ -2.04
SIR4YDR227W UTP13Q05946 817 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W GPB1Q08886 897 aa2.28□□□□□ -2.04
SIR4YDR227W APL4Q12028 832 aa2.28□□□□□ -2.04
SIR4YDR227W DIN7Q12086 430 aa2.28□□□□□ -2.04
SIR4YDR227W MCD1Q12158 566 aa2.28□□□□□ -2.04
SIR4YDR227W MRP8P35719 219 aa2.27□□□□□ -2.05
SIR4YDR227W DUN1P39009 513 aa2.27□□□□□ -2.05
SIR4YDR227W ISM1P48526 1002 aa2.27□□□□□ -2.05
SIR4YDR227W SLD3P53135 668 aa2.27□□□□□ -2.05
SIR4YDR227W YNL058CP53947 316 aa2.27□□□□□ -2.05
SIR4YDR227W PEX25Q02969 394 aa2.27□□□□□ -2.05
SIR4YDR227W MTQ2Q03920 221 aaPredicted RBP2.27□□□□□ -2.05
SIR4YDR227W EIS1Q05050 843 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W YCS4Q06156 1176 aa2.27□□□□□ -2.05
SIR4YDR227W VMA2P16140 517 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W BEM1P29366 551 aa2.27□□□□□ -2.05
SIR4YDR227W DHR2P36009 735 aaPredicted RBP2.27□□□□□ -2.05
SIR4YDR227W MRPL36P36531 177 aa2.27□□□□□ -2.05
SIR4YDR227W PGM2P37012 569 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W NEM1P38757 446 aa2.27□□□□□ -2.05
SIR4YDR227W OSW5P40219 148 aa2.27□□□□□ -2.05
SIR4YDR227W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SIR4YDR227W ASK10P48361 1146 aa2.27□□□□□ -2.05
SIR4YDR227W TEP1P53916 434 aa2.27□□□□□ -2.05
SIR4YDR227W CTR9P89105 1077 aa2.27□□□□□ -2.05
SIR4YDR227W SMA1Q02651 245 aa2.27□□□□□ -2.05
SIR4YDR227W LCD1Q04377 747 aa2.27□□□□□ -2.05
SIR4YDR227W PDR8Q06149 701 aa2.27□□□□□ -2.05
SIR4YDR227W REX3Q12090 404 aa2.27□□□□□ -2.05
SIR4YDR227W YPR117WQ06116 2489 aa2.27□□□□□ -2.05
SIR4YDR227W LAT1P12695 482 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W SRO9P25567 434 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W UBP13P38187 747 aa2.27□□□□□ -2.05
SIR4YDR227W SLX1P38324 304 aa2.27□□□□□ -2.05
SIR4YDR227W DLD3P39976 496 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W PIC2P40035 300 aa2.27□□□□□ -2.05
SIR4YDR227W PUS2P53167 370 aa2.27□□□□□ -2.05
SIR4YDR227W PTA1Q01329 785 aaPredicted RBP2.27□□□□□ -2.05
SIR4YDR227W DFG5Q05031 458 aa2.27□□□□□ -2.05
SIR4YDR227W CDD1Q06549 142 aa2.27□□□□□ -2.05
SIR4YDR227W BTS1Q12051 335 aa2.27□□□□□ -2.05
SIR4YDR227W HFI1Q12060 488 aa2.27□□□□□ -2.05
SIR4YDR227W HKR1P41809 1802 aa2.27□□□□□ -2.05
SIR4YDR227W PRD1P25375 712 aa2.27□□□□□ -2.05
SIR4YDR227W SEC65P29478 273 aa2.27□□□□□ -2.05
SIR4YDR227W MCM4P30665 933 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W YHR218WP38899 603 aa2.27□□□□□ -2.05
SIR4YDR227W SEC28P40509 296 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W DLD2P46681 530 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W TRF5P48561 642 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W UBP15P50101 1230 aa2.27□□□□□ -2.05
SIR4YDR227W OMS1Q06668 471 aa2.27□□□□□ -2.05
SIR4YDR227W RSC58Q07979 502 aa2.27□□□□□ -2.05
SIR4YDR227W RPN8Q08723 338 aaKnown RBP2.27□□□□□ -2.05
SIR4YDR227W YML002WP0CF17 737 aa2.26□□□□□ -2.05
SIR4YDR227W GCD7P32502 381 aaPredicted RBP2.26□□□□□ -2.05
SIR4YDR227W UBP11P36026 717 aa2.26□□□□□ -2.05
SIR4YDR227W YKL071WP36086 256 aa2.26□□□□□ -2.05
SIR4YDR227W ERC1P38767 581 aa2.26□□□□□ -2.05
SIR4YDR227W PEX28P38848 579 aa2.26□□□□□ -2.05
SIR4YDR227W END3P39013 349 aa2.26□□□□□ -2.05
SIR4YDR227W YJL068CP40363 299 aa2.26□□□□□ -2.05
SIR4YDR227W CAB2P40506 365 aa2.26□□□□□ -2.05
SIR4YDR227W JJJ2P46997 583 aa2.26□□□□□ -2.05
SIR4YDR227W ZAP1P47043 880 aa2.26□□□□□ -2.05
SIR4YDR227W SRB7P47822 140 aa2.26□□□□□ -2.05
SIR4YDR227W DSE4P53753 1117 aa2.26□□□□□ -2.05
SIR4YDR227W CWC21Q03375 135 aaKnown RBP2.26□□□□□ -2.05
SIR4YDR227W APC2Q12440 853 aa2.26□□□□□ -2.05
SIR4YDR227W PCD1Q12524 340 aa2.26□□□□□ -2.05
SIR4YDR227W MLP1Q02455 1875 aaKnown RBP2.26□□□□□ -2.05
SIR4YDR227W ATP1P07251 545 aaKnown RBP2.26□□□□□ -2.05
SIR4YDR227W POL4P25615 582 aa2.26□□□□□ -2.05
SIR4YDR227W SMC1P32908 1225 aa2.26□□□□□ -2.05
SIR4YDR227W PHO11P35842 467 aa2.26□□□□□ -2.05
SIR4YDR227W MRPL40P36534 297 aa2.26□□□□□ -2.05
SIR4YDR227W YBL029WP38201 376 aa2.26□□□□□ -2.05
SIR4YDR227W PHO12P38693 467 aa2.26□□□□□ -2.05
SIR4YDR227W KAP123P40069 1113 aaKnown RBP2.26□□□□□ -2.05
SIR4YDR227W TMN3P40071 706 aa2.26□□□□□ -2.05
SIR4YDR227W FMP10P40098 244 aa2.26□□□□□ -2.05
SIR4YDR227W LIA1P47120 325 aaKnown RBP2.26□□□□□ -2.05
SIR4YDR227W ATP4P05626 244 aa2.26□□□□□ -2.05
SIR4YDR227W SEC53P07283 254 aaKnown RBP2.26□□□□□ -2.05
SIR4YDR227W GPA1P08539 472 aa2.26□□□□□ -2.05
SIR4YDR227W SPE2P21182 396 aa2.26□□□□□ -2.05
SIR4YDR227W CYM1P32898 989 aa2.26□□□□□ -2.05
SIR4YDR227W SPC72P39723 622 aa2.26□□□□□ -2.05
SIR4YDR227W TAF4P50105 388 aa2.26□□□□□ -2.05
SIR4YDR227W CUE3P53137 624 aaKnown RBP2.26□□□□□ -2.05
SIR4YDR227W OAZ1Q02803 292 aa2.26□□□□□ -2.05
SIR4YDR227W HED1Q03937 162 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms