RNA–Protein interactions for RNA: YBR048W

RPS11B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS11B, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS11B	YBR048W	FTR1	P40088	404 aa		4.25	□□□□□ -1.73
RPS11B	YBR048W	NDE1	P40215	560 aa		4.25	□□□□□ -1.73
RPS11B	YBR048W	RIC1	P40395	1056 aa		4.25	□□□□□ -1.73
RPS11B	YBR048W	AMA1	P50082	593 aa		4.25	□□□□□ -1.73
RPS11B	YBR048W	SAP4	P53036	818 aa		4.25	□□□□□ -1.73
RPS11B	YBR048W	TEL2	P53038	688 aa		4.25	□□□□□ -1.73
RPS11B	YBR048W	MRPS35	P53292	345 aa		4.25	□□□□□ -1.73
RPS11B	YBR048W	YAP6	Q03935	383 aa		4.25	□□□□□ -1.73
RPS11B	YBR048W	ARA2	Q04212	335 aa		4.25	□□□□□ -1.73
RPS11B	YBR048W	GSF2	Q04697	403 aa	Known RBP	4.25	□□□□□ -1.73
RPS11B	YBR048W	YCG1	Q06680	1035 aa		4.25	□□□□□ -1.73
RPS11B	YBR048W	CSR1	Q06705	408 aa	Known RBP	4.25	□□□□□ -1.73
RPS11B	YBR048W	FUM1	P08417	488 aa	Known RBP	4.24	□□□□□ -1.73
RPS11B	YBR048W	PRP28	P23394	588 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	PAH1	P32567	862 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	TSA1	P34760	196 aa	Known RBP	4.24	□□□□□ -1.73
RPS11B	YBR048W	AXL2	P38928	823 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	UME6	P39001	836 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	AIM21	P40563	679 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	YIR042C	P40586	236 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	POL31	P46957	487 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	UPF3	P48412	387 aa	Known RBP	4.24	□□□□□ -1.73
RPS11B	YBR048W	MDR1	P53258	950 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	ACS1	Q01574	713 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	CDA2	Q06703	312 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	TRM8	Q12009	286 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	ERP4	Q12450	207 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	ECM3	Q99252	613 aa		4.24	□□□□□ -1.73
RPS11B	YBR048W	SOD2	P00447	233 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	RPS9B	P05755	195 aa	Known RBP	4.23	□□□□□ -1.73
RPS11B	YBR048W	ADE3	P07245	946 aa	Known RBP	4.23	□□□□□ -1.73
RPS11B	YBR048W	TRP4	P07285	380 aa	Predicted RBP	4.23	□□□□□ -1.73
RPS11B	YBR048W	MRP7	P12687	371 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	BET2	P20133	325 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	SEC15	P22224	910 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	RIT1	P23796	513 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	IFA38	P38286	347 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	SFB3	P38810	929 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	NUP60	P39705	539 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	DPH1	P40487	425 aa	Known RBP	4.23	□□□□□ -1.73
RPS11B	YBR048W	CAB2	P40506	365 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	PSP1	P50896	841 aa	Known RBP	4.23	□□□□□ -1.73
RPS11B	YBR048W	RRT6	P53117	311 aa	Predicted RBP	4.23	□□□□□ -1.73
RPS11B	YBR048W	MTL1	P53214	551 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	CBK1	P53894	756 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	ATG21	Q02887	496 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	SPC19	Q03954	165 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	ARR3	Q06598	404 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	YFT2	Q06676	274 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	ESC8	Q08119	714 aa		4.23	□□□□□ -1.73
RPS11B	YBR048W	FOB1	O13329	566 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	PCK1	P10963	549 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	VPS33	P20795	691 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	SAN1	P22470	610 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	STE11	P23561	717 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	SWI4	P25302	1093 aa	Known RBP	4.22	□□□□□ -1.73
RPS11B	YBR048W	FEN2	P25621	512 aa	Known RBP	4.22	□□□□□ -1.73
RPS11B	YBR048W	ARP2	P32381	391 aa	Known RBP	4.22	□□□□□ -1.73
RPS11B	YBR048W	BCS1	P32839	456 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	MUD2	P36084	527 aa	Known RBP	4.22	□□□□□ -1.73
RPS11B	YBR048W	NOP4	P37838	685 aa	Known RBP	4.22	□□□□□ -1.73
RPS11B	YBR048W	COS111	P38308	924 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	VFA1	P40080	203 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	PIG2	P40187	538 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	LRO1	P40345	661 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	TRS31	Q03337	283 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	VPS64	Q03944	604 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	YKU80	Q04437	629 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	AIM6	Q07716	390 aa		4.22	□□□□□ -1.73
RPS11B	YBR048W	RPS13	P05756	151 aa	Known RBP	4.21	□□□□□ -1.74
RPS11B	YBR048W	CDC16	P09798	840 aa		4.21	□□□□□ -1.74
RPS11B	YBR048W	SEC12	P11655	471 aa		4.21	□□□□□ -1.74
RPS11B	YBR048W	GUK1	P15454	187 aa	Known RBP	4.21	□□□□□ -1.74
RPS11B	YBR048W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
RPS11B	YBR048W	CMK1	P27466	446 aa	Known RBP	4.21	□□□□□ -1.74
RPS11B	YBR048W	THI80	P35202	319 aa		4.21	□□□□□ -1.74
RPS11B	YBR048W	TEF4	P36008	412 aa	Known RBP	4.21	□□□□□ -1.74
RPS11B	YBR048W	YJL193W	P39542	402 aa		4.21	□□□□□ -1.74
RPS11B	YBR048W	FKH2	P41813	862 aa		4.21	□□□□□ -1.74
RPS11B	YBR048W	SGM1	P47166	707 aa		4.21	□□□□□ -1.74
RPS11B	YBR048W	CSL4	P53859	292 aa	Predicted RBP	4.21	□□□□□ -1.74
RPS11B	YBR048W	ENT1	Q12518	454 aa		4.21	□□□□□ -1.74
RPS11B	YBR048W	SIR3	P06701	978 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	TUP1	P16649	713 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	VPS34	P22543	875 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	RAD16	P31244	790 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	MSS1	P32559	526 aa	Predicted RBP	4.2	□□□□□ -1.74
RPS11B	YBR048W	NPL6	P32832	435 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	LST4	P34239	828 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	SET3	P36124	751 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	YBR053C	P38235	358 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	YIL077C	P40508	320 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	SIP4	P46954	829 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	SPT20	P50875	604 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	UBC11	P52492	156 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	PRP43	P53131	767 aa	Known RBP	4.2	□□□□□ -1.74
RPS11B	YBR048W	RIM8	P53179	542 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	DLT1	Q04216	342 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	SCM3	Q12334	223 aa		4.2	□□□□□ -1.74
RPS11B	YBR048W	LAS17	Q12446	633 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 115.7 ms