RNA–Protein interactions for RNA: YNL294C

RIM21, Transcript of pH sensor molecule, component of the RIM101 pathway, yeast

Gene RIM21, Length 1,602 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM21	YNL294C	RRP5	Q05022	1729 aa	Known RBP	4.63	□□□□□ -1.67
RIM21	YNL294C	RPP1A	P05318	106 aa	Predicted RBP	4.62	□□□□□ -1.67
RIM21	YNL294C	PGI1	P12709	554 aa	Known RBP	4.62	□□□□□ -1.67
RIM21	YNL294C	KIN2	P13186	1147 aa	Known RBP	4.62	□□□□□ -1.67
RIM21	YNL294C	RED1	P14291	827 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	KSS1	P14681	368 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	FRS2	P15625	503 aa	Known RBP	4.62	□□□□□ -1.67
RIM21	YNL294C	DBF2	P22204	572 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	DPB2	P24482	689 aa	Predicted RBP	4.62	□□□□□ -1.67
RIM21	YNL294C	SPB1	P25582	841 aa	Predicted RBP	4.62	□□□□□ -1.67
RIM21	YNL294C	SMC1	P32908	1225 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	CNS1	P33313	385 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	MRPL17	P36528	281 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	YHI9	P38765	294 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	PCF11	P39081	626 aa	Predicted RBP	4.62	□□□□□ -1.67
RIM21	YNL294C	RCY1	P39531	840 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	YJL070C	P40361	888 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	LYS14	P40971	790 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	YJR039W	P47107	1121 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	MRM2	P53123	320 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	PEF1	P53238	335 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	YGR067C	P53243	804 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	RBG2	P53295	368 aa	Known RBP	4.62	□□□□□ -1.67
RIM21	YNL294C	ZDS2	P54786	942 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	SLT2	Q00772	484 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	TAF11	Q04226	346 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	DXO1	Q06349	442 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	NSE1	Q07913	336 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	VHS3	Q08438	674 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	GPN2	Q08726	347 aa	Predicted RBP	4.62	□□□□□ -1.67
RIM21	YNL294C	YLR125W	Q12138	136 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	PDR12	Q02785	1511 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	NTE1	Q04958	1679 aa		4.62	□□□□□ -1.67
RIM21	YNL294C	CLB2	P24869	491 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	KRR1	P25586	316 aa	Predicted RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	RAD27	P26793	382 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	HXT3	P32466	567 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	ABZ1	P37254	787 aa	Predicted RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	SDH8	P38345	138 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	TFG2	P41896	400 aa	Predicted RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	MNN11	P46985	422 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	PAN2	P53010	1115 aa	Predicted RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	KAP114	P53067	1004 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	MEC3	Q02574	474 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	NKP2	Q06162	153 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	EAF1	Q06337	982 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	DTD1	Q07648	150 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	YOL057W	Q08225	711 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	APL4	Q12028	832 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	CDC25	P04821	1589 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	CHC1	P22137	1653 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	RPO21	P04050	1733 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	SIR3	P06701	978 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	ALG1	P16661	449 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	DBP3	P20447	523 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	CKI1	P20485	582 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	VMA3	P25515	160 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	PDC6	P26263	563 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	YKR015C	P36111	568 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	HXT13	P39924	564 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	YFH7	P43591	353 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	AVT1	P47082	602 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	TMA22	P47089	198 aa	Predicted RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	IMD3	P50095	523 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	SAM37	P50110	327 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	CDC55	Q00362	526 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	EGD1	Q02642	157 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	SLU7	Q02775	382 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	SRL4	Q03085	281 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	FCP1	Q03254	732 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	ABZ2	Q03266	374 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	VPS64	Q03944	604 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	YLR287C	Q05881	355 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	RGC1	Q06108	1083 aa	Known RBP	4.61	□□□□□ -1.67
RIM21	YNL294C	YCS4	Q06156	1176 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	SMC5	Q08204	1093 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	SGO1	Q08490	590 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	PIN2	Q12057	282 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	RTP1	Q12751	981 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	SNT2	P53127	1403 aa		4.61	□□□□□ -1.67
RIM21	YNL294C	CMD1	P06787	147 aa	Known RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	GPA2	P10823	449 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	SNA3	P14359	133 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	GLK1	P17709	500 aa	Known RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	URA4	P20051	364 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	ACE2	P21192	770 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	MRPL8	P22353	238 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	MBR1	P23493	339 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	VPS3	P23643	1011 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	RSC6	P25632	483 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	CRM1	P30822	1084 aa	Known RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	PYC2	P32327	1180 aa	Known RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	EUG1	P32474	517 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	PRP19	P32523	503 aa	Known RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	DOM34	P33309	386 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	SCD5	P34758	872 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	SHM1	P37292	490 aa	Predicted RBP	4.6	□□□□□ -1.67
RIM21	YNL294C	DSS1	P39112	969 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	RPH1	P39956	796 aa		4.6	□□□□□ -1.67
RIM21	YNL294C	BUD16	P39988	312 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms