RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	SIP5	P40210	489 aa	Known RBP	4.45	□□□□□ -1.7
UPC2	YDR213W	MAM33	P40513	266 aa		4.45	□□□□□ -1.7
UPC2	YDR213W	RLP7	P40693	322 aa	Known RBP	4.45	□□□□□ -1.7
UPC2	YDR213W	MRM2	P53123	320 aa		4.45	□□□□□ -1.7
UPC2	YDR213W	GUP1	P53154	560 aa		4.45	□□□□□ -1.7
UPC2	YDR213W	NMA111	P53920	997 aa		4.45	□□□□□ -1.7
UPC2	YDR213W	SHR3	Q02774	210 aa		4.45	□□□□□ -1.7
UPC2	YDR213W	PEX29	Q03370	554 aa		4.45	□□□□□ -1.7
UPC2	YDR213W	JIP5	Q06214	492 aa	Predicted RBP	4.45	□□□□□ -1.7
UPC2	YDR213W	PEX15	Q08215	383 aa		4.45	□□□□□ -1.7
UPC2	YDR213W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
UPC2	YDR213W	YLR053C	Q12026	108 aa		4.45	□□□□□ -1.7
UPC2	YDR213W	NCR1	Q12200	1170 aa		4.45	□□□□□ -1.7
UPC2	YDR213W	VPS5	Q92331	675 aa		4.45	□□□□□ -1.7
UPC2	YDR213W	GCN3	P14741	305 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	URA4	P20051	364 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	HBS1	P32769	611 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	BLI1	P35727	113 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	VAC8	P39968	578 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	ULP2	P40537	1034 aa	Predicted RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	GPD2	P41911	440 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	YGR125W	P53273	1036 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	BIO4	P53630	237 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	TEP1	P53916	434 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	CIK1	Q01649	594 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	RNY1	Q02933	434 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	YMR018W	Q04364	514 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	YDL057W	Q07379	328 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	THI3	Q07471	609 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	UIP4	Q08926	304 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	BBP1	Q12365	385 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	HTZ1	Q12692	134 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	BRR1	Q99177	341 aa	Predicted RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	PHO4	P07270	312 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	YEL076C-A	P0CX16	216 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	YLR464W	P0CX17	216 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	RSR1	P13856	272 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	HEM15	P16622	393 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	CLN1	P20437	546 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	UBA1	P22515	1024 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	CAD1	P24813	409 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	ITR2	P30606	609 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	FRD1	P32614	470 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	TFC4	P33339	1025 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	YKR015C	P36111	568 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	EXO5	P38289	585 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	YDR089W	P38966	869 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	SAK1	P38990	1142 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	AST2	P39945	430 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	UBP9	P39967	754 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	YEL076C	P39971	216 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	RNH70	P53331	553 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	DSE4	P53753	1117 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.44	□□□□□ -1.7	not detected
UPC2	YDR213W	EEB1	Q02891	456 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	SMP3	Q04174	516 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	BUD22	Q04347	519 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	YMR111C	Q04461	462 aa	Predicted RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	BCP1	Q06338	283 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	BUD7	Q08754	746 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	HIF1	Q12373	385 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	COR1	P07256	457 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	HEM1	P09950	548 aa	Predicted RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	LCB1	P25045	558 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	CCL1	P37366	393 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	GGA2	P38817	585 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	ARB1	P40024	610 aa	Known RBP	4.44	□□□□□ -1.7
UPC2	YDR213W	YGR266W	P53326	701 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	HXT15	P54854	567 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	SLX4	Q12098	748 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	TSC13	Q99190	310 aa		4.44	□□□□□ -1.7
UPC2	YDR213W	RPN13	O13563	156 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	GCR1	P07261	785 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	SSC1	P0CS90	654 aa	Known RBP	4.43	□□□□□ -1.7
UPC2	YDR213W	PEP5	P12868	1029 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	PRP6	P19735	899 aa	Predicted RBP	4.43	□□□□□ -1.7
UPC2	YDR213W	POL4	P25615	582 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	BUD23	P25627	275 aa	Predicted RBP	4.43	□□□□□ -1.7
UPC2	YDR213W	RPS5	P26783	225 aa	Known RBP	4.43	□□□□□ -1.7
UPC2	YDR213W	SEC21	P32074	935 aa	Known RBP	4.43	□□□□□ -1.7
UPC2	YDR213W	SPT16	P32558	1035 aa	Known RBP	4.43	□□□□□ -1.7
UPC2	YDR213W	TFB1	P32776	642 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	SPC97	P38863	823 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	SWP82	P43554	623 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	FMP32	P43557	207 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	YGL176C	P46945	554 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	ACF4	P47129	309 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	MSN5	P52918	1224 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	NBP1	P52919	319 aa	Predicted RBP	4.43	□□□□□ -1.7
UPC2	YDR213W	ORC3	P54790	616 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	TMA20	P89886	181 aa	Predicted RBP	4.43	□□□□□ -1.7
UPC2	YDR213W	ULP1	Q02724	621 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	NAN1	Q02931	896 aa	Known RBP	4.43	□□□□□ -1.7
UPC2	YDR213W	CDA1	Q06702	301 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	PUN1	Q06991	263 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	GET4	Q12125	312 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	YPR015C	Q12531	247 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	ADF1	Q2V2Q1	113 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	IDI1	P15496	288 aa		4.43	□□□□□ -1.7
UPC2	YDR213W	MDL2	P33311	773 aa		4.43	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms