RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C GIP1P38229 639 aa7.22□□□□□ -1.25
LDB7YBL006C CBR1P38626 284 aaKnown RBP7.22□□□□□ -1.25
LDB7YBL006C DUN1P39009 513 aa7.22□□□□□ -1.25
LDB7YBL006C PSY2P40164 858 aa7.22□□□□□ -1.25
LDB7YBL006C OSW5P40219 148 aa7.22□□□□□ -1.25
LDB7YBL006C DJP1P40564 432 aa7.22□□□□□ -1.25
LDB7YBL006C STU2P46675 888 aa7.22□□□□□ -1.25
LDB7YBL006C VEL1P53058 206 aa7.22□□□□□ -1.25
LDB7YBL006C PMT7Q06644 662 aa7.22□□□□□ -1.25
LDB7YBL006C EMP46Q12396 444 aa7.22□□□□□ -1.25
LDB7YBL006C SPO21Q12411 609 aa7.22□□□□□ -1.25
LDB7YBL006C CAP1P28495 268 aaKnown RBP7.21□□□□□ -1.26
LDB7YBL006C TCD2P36101 447 aaKnown RBP7.21□□□□□ -1.26
LDB7YBL006C QNS1P38795 714 aaKnown RBP7.21□□□□□ -1.26
LDB7YBL006C GIP4P39732 760 aa7.21□□□□□ -1.26
LDB7YBL006C YAP5P40574 245 aa7.21□□□□□ -1.26
LDB7YBL006C VNX1P42839 908 aa7.21□□□□□ -1.26
LDB7YBL006C TAD1P53065 400 aa7.21□□□□□ -1.26
LDB7YBL006C TDA7P53882 636 aaPredicted RBP7.21□□□□□ -1.26
LDB7YBL006C HPF1Q05164 967 aa7.21□□□□□ -1.26
LDB7YBL006C SIL1Q08199 421 aa7.21□□□□□ -1.26
LDB7YBL006C SVS1Q12254 260 aa7.21□□□□□ -1.26
LDB7YBL006C ARP7Q12406 477 aa7.21□□□□□ -1.26
LDB7YBL006C BI2P03873 423 aa7.2□□□□□ -1.26
LDB7YBL006C BI4P03879 638 aa7.2□□□□□ -1.26
LDB7YBL006C MSF1P08425 469 aa7.2□□□□□ -1.26
LDB7YBL006C ATE1P16639 503 aa7.2□□□□□ -1.26
LDB7YBL006C TUP1P16649 713 aa7.2□□□□□ -1.26
LDB7YBL006C RPN12P32496 274 aa7.2□□□□□ -1.26
LDB7YBL006C NIP100P33420 868 aa7.2□□□□□ -1.26
LDB7YBL006C SPT8P38915 602 aa7.2□□□□□ -1.26
LDB7YBL006C GDH3P39708 457 aa7.2□□□□□ -1.26
LDB7YBL006C HOP2P53187 214 aa7.2□□□□□ -1.26
LDB7YBL006C YMR206WQ03695 313 aa7.2□□□□□ -1.26
LDB7YBL006C YPR078CQ06813 372 aa7.2□□□□□ -1.26
LDB7YBL006C PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
LDB7YBL006C BI3Q9ZZW7 517 aa7.2□□□□□ -1.26
LDB7YBL006C EST1P17214 699 aaPredicted RBP7.19□□□□□ -1.26
LDB7YBL006C GYP6P32806 458 aa7.19□□□□□ -1.26
LDB7YBL006C CSE1P33307 960 aa7.19□□□□□ -1.26
LDB7YBL006C SRB2P34162 210 aa7.19□□□□□ -1.26
LDB7YBL006C PXL1P36166 706 aa7.19□□□□□ -1.26
LDB7YBL006C KTR4P38131 464 aa7.19□□□□□ -1.26
LDB7YBL006C HSL7P38274 827 aa7.19□□□□□ -1.26
LDB7YBL006C PCF11P39081 626 aaPredicted RBP7.19□□□□□ -1.26
LDB7YBL006C UBP7P40453 1071 aa7.19□□□□□ -1.26
LDB7YBL006C YJR079WP47126 109 aa7.19□□□□□ -1.26
LDB7YBL006C FLC3P53121 802 aa7.19□□□□□ -1.26
LDB7YBL006C YNL035CP53962 389 aaKnown RBP7.19□□□□□ -1.26
LDB7YBL006C NDD1Q08887 554 aa7.19□□□□□ -1.26
LDB7YBL006C HMI1Q12039 706 aa7.19□□□□□ -1.26
LDB7YBL006C PAB1P04147 577 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26 RIP-Chip
LDB7YBL006C CUP1-1P0CX80 61 aa7.18□□□□□ -1.26
LDB7YBL006C CUP1-2P0CX81 61 aa7.18□□□□□ -1.26
LDB7YBL006C PUT4P15380 627 aa7.18□□□□□ -1.26
LDB7YBL006C YIH1P25637 258 aa7.18□□□□□ -1.26
LDB7YBL006C SPT5P27692 1063 aaKnown RBP7.18□□□□□ -1.26
LDB7YBL006C MSP1P28737 362 aa7.18□□□□□ -1.26
LDB7YBL006C MET22P32179 357 aa7.18□□□□□ -1.26
LDB7YBL006C GUT1P32190 709 aa7.18□□□□□ -1.26
LDB7YBL006C SMC1P32908 1225 aa7.18□□□□□ -1.26
LDB7YBL006C STE13P33894 931 aa7.18□□□□□ -1.26
LDB7YBL006C EXO5P38289 585 aa7.18□□□□□ -1.26
LDB7YBL006C PPX1P38698 397 aa7.18□□□□□ -1.26
LDB7YBL006C PIK1P39104 1066 aa7.18□□□□□ -1.26
LDB7YBL006C YER189WP40104 122 aa7.18□□□□□ -1.26
LDB7YBL006C TMA108P40462 946 aa7.18□□□□□ -1.26
LDB7YBL006C RTT101P47050 842 aa7.18□□□□□ -1.26
LDB7YBL006C PYK2P52489 506 aaKnown RBP7.18□□□□□ -1.26
LDB7YBL006C NUP84P52891 726 aa7.18□□□□□ -1.26
LDB7YBL006C TRM112P53738 135 aaPredicted RBP7.18□□□□□ -1.26
LDB7YBL006C SSL2Q00578 843 aa7.18□□□□□ -1.26
LDB7YBL006C RPN4Q03465 531 aa7.18□□□□□ -1.26
LDB7YBL006C JIP5Q06214 492 aaPredicted RBP7.18□□□□□ -1.26
LDB7YBL006C AIM39Q08223 395 aa7.18□□□□□ -1.26
LDB7YBL006C KAR3P17119 729 aa7.17□□□□□ -1.26
LDB7YBL006C ARF2P19146 181 aaKnown RBP7.17□□□□□ -1.26
LDB7YBL006C SEC65P29478 273 aa7.17□□□□□ -1.26
LDB7YBL006C ABD1P32783 436 aaPredicted RBP7.17□□□□□ -1.26
LDB7YBL006C SAP190P36123 1033 aa7.17□□□□□ -1.26
LDB7YBL006C WSC4P38739 605 aa7.17□□□□□ -1.26
LDB7YBL006C EXO1P39875 702 aa7.17□□□□□ -1.26
LDB7YBL006C VFA1P40080 203 aa7.17□□□□□ -1.26
LDB7YBL006C SNZ3P43545 298 aa7.17□□□□□ -1.26
LDB7YBL006C PRP24P49960 444 aaKnown RBP7.17□□□□□ -1.26
LDB7YBL006C SNZ2P53824 298 aa7.17□□□□□ -1.26
LDB7YBL006C KTR6P54070 446 aa7.17□□□□□ -1.26
LDB7YBL006C GYL1Q04322 720 aa7.17□□□□□ -1.26
LDB7YBL006C YDR222WQ04925 415 aa7.17□□□□□ -1.26
LDB7YBL006C YSH1Q06224 779 aaPredicted RBP7.17□□□□□ -1.26
LDB7YBL006C THI20Q08224 551 aa7.17□□□□□ -1.26
LDB7YBL006C WSC3Q12215 556 aa7.17□□□□□ -1.26
LDB7YBL006C CYC8P14922 966 aa7.16□□□□□ -1.26
LDB7YBL006C VMA4P22203 233 aaKnown RBP7.16□□□□□ -1.26
LDB7YBL006C SEC1P30619 724 aaKnown RBP7.16□□□□□ -1.26
LDB7YBL006C SEC6P32844 805 aa7.16□□□□□ -1.26
LDB7YBL006C URA8P38627 578 aaPredicted RBP7.16□□□□□ -1.26
LDB7YBL006C CRP1P38845 465 aaKnown RBP7.16□□□□□ -1.26
LDB7YBL006C MMM1P41800 426 aa7.16□□□□□ -1.26
LDB7YBL006C DAN4P47179 1161 aa7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms