RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	11.03	□□□□□ -0.64	not detected
HHO1	YPL127C	DSE1	P40077	573 aa		11.03	□□□□□ -0.64
HHO1	YPL127C	ARG2	P40360	574 aa		11.03	□□□□□ -0.64
HHO1	YPL127C	TMA108	P40462	946 aa		11.03	□□□□□ -0.64
HHO1	YPL127C	YNL247W	P53852	767 aa	Known RBP	11.03	□□□□□ -0.64
HHO1	YPL127C	TIF35	Q04067	274 aa	Known RBP	11.03	□□□□□ -0.64
HHO1	YPL127C	AIM39	Q08223	395 aa		11.03	□□□□□ -0.64
HHO1	YPL127C	PYC1	P11154	1178 aa	Known RBP	11.02	□□□□□ -0.65
HHO1	YPL127C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	11.02	□□□□□ -0.65	not detected
HHO1	YPL127C	DRE2	P36152	348 aa		11.02	□□□□□ -0.65
HHO1	YPL127C	TBS1	P38114	1094 aa		11.02	□□□□□ -0.65
HHO1	YPL127C	YHL026C	P38740	315 aa		11.02	□□□□□ -0.65
HHO1	YPL127C	CCT2	P39076	527 aa	Known RBP	11.02	□□□□□ -0.65
HHO1	YPL127C	GCV2	P49095	1034 aa		11.02	□□□□□ -0.65
HHO1	YPL127C	CPR6	P53691	371 aa	Known RBP	11.02	□□□□□ -0.65
HHO1	YPL127C	MRS2	Q01926	470 aa		11.02	□□□□□ -0.65
HHO1	YPL127C	VPS72	Q03388	795 aa		11.02	□□□□□ -0.65
HHO1	YPL127C	ARO80	Q04052	950 aa		11.02	□□□□□ -0.65
HHO1	YPL127C	FRA1	Q07825	749 aa		11.02	□□□□□ -0.65
HHO1	YPL127C	DNL4	Q08387	944 aa	Predicted RBP	11.02	□□□□□ -0.65
HHO1	YPL127C	YDR018C	Q12185	396 aa		11.02	□□□□□ -0.65
HHO1	YPL127C	RIF1	P29539	1916 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	GCR1	P07261	785 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	HEM1	P09950	548 aa	Predicted RBP	11.01	□□□□□ -0.65
HHO1	YPL127C	RSA4	P25382	515 aa	Known RBP	11.01	□□□□□ -0.65
HHO1	YPL127C	FUB1	P25659	250 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	OXP1	P28273	1286 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	SEC1	P30619	724 aa	Known RBP	11.01	□□□□□ -0.65
HHO1	YPL127C	CCL1	P37366	393 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	AGP2	P38090	596 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	POP4	P38336	279 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	ERP2	P39704	215 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	SMX2	P40204	77 aa	Known RBP	11.01	□□□□□ -0.65
HHO1	YPL127C	HLJ1	P48353	224 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	ALT2	P52892	507 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	CDC55	Q00362	526 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	ULP1	Q02724	621 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	ACM1	Q08981	209 aa		11.01	□□□□□ -0.65
HHO1	YPL127C	ILV6	P25605	309 aa	Known RBP	11	□□□□□ -0.65
HHO1	YPL127C	FRE1	P32791	686 aa		11	□□□□□ -0.65
HHO1	YPL127C	TVP23	P38962	199 aa		11	□□□□□ -0.65
HHO1	YPL127C	KHA1	P40309	873 aa		11	□□□□□ -0.65
HHO1	YPL127C	YJL045W	P47052	634 aa		11	□□□□□ -0.65
HHO1	YPL127C	SHR3	Q02774	210 aa		11	□□□□□ -0.65
HHO1	YPL127C	DIS3	Q08162	1001 aa	Known RBP	11	□□□□□ -0.65
HHO1	YPL127C	VPS54	Q12071	889 aa		11	□□□□□ -0.65
HHO1	YPL127C	EMP46	Q12396	444 aa		11	□□□□□ -0.65
HHO1	YPL127C	VPS5	Q92331	675 aa		11	□□□□□ -0.65
HHO1	YPL127C	ARG4	P04076	463 aa	Predicted RBP	10.99	□□□□□ -0.65
HHO1	YPL127C	RAD10	P06838	210 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	TIF1	P10081	395 aa	Known RBP	10.99	□□□□□ -0.65
HHO1	YPL127C	YPK1	P12688	680 aa	Known RBP	10.99	□□□□□ -0.65
HHO1	YPL127C	VPS3	P23643	1011 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	SAT4	P25333	603 aa	Known RBP	10.99	□□□□□ -0.65
HHO1	YPL127C	BIO2	P32451	375 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	OAF3	P36023	863 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	YIL054W	P40524	105 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	RGD2	P43556	714 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	POL31	P46957	487 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	URB2	P47108	1174 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	PRM6	Q04705	352 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	YRR1	Q12172	810 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	YOR022C	Q12204	715 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	MAM3	Q12296	706 aa		10.99	□□□□□ -0.65
HHO1	YPL127C	QCR6	P00127	147 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	CBF1	P17106	351 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	SRB2	P34162	210 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	SHE3	P38272	425 aa	Known RBP	10.98	□□□□□ -0.65
HHO1	YPL127C	LYS9	P38999	446 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	INP51	P40559	946 aa	Known RBP	10.98	□□□□□ -0.65
HHO1	YPL127C	ATG36	P46983	293 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	STB4	P50104	949 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	YNL040W	P53960	456 aa	Predicted RBP	10.98	□□□□□ -0.65
HHO1	YPL127C	MUB1	Q03162	620 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	USA1	Q03714	838 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	PNP1	Q05788	311 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	MDM38	Q08179	573 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	APC5	Q08683	685 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	LDB19	Q12502	818 aa		10.98	□□□□□ -0.65
HHO1	YPL127C	RPB2	P08518	1224 aa	Known RBP	10.97	□□□□□ -0.65
HHO1	YPL127C	HEM15	P16622	393 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	SLY1	P22213	666 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	GAC1	P28006	793 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	MEI4	P29467	408 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	ABZ1	P37254	787 aa	Predicted RBP	10.97	□□□□□ -0.65
HHO1	YPL127C	RPT2	P40327	437 aa	Known RBP	10.97	□□□□□ -0.65
HHO1	YPL127C	TRS85	P46944	698 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	ASG7	P46993	209 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	VPS62	P53285	467 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	COG6	P53959	839 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	TAF9	Q05027	157 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	FMP25	Q08023	583 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	SDH5	Q08230	162 aa		10.97	□□□□□ -0.65
HHO1	YPL127C	FAP7	Q12055	197 aa	Predicted RBP	10.97	□□□□□ -0.65
HHO1	YPL127C	TPK1	P06244	397 aa		10.96	□□□□□ -0.65
HHO1	YPL127C	POL3	P15436	1097 aa		10.96	□□□□□ -0.65
HHO1	YPL127C	GPI10	P30777	616 aa		10.96	□□□□□ -0.65
HHO1	YPL127C	DEP1	P31385	405 aa		10.96	□□□□□ -0.65
HHO1	YPL127C	UIP5	P36137	443 aa		10.96	□□□□□ -0.65
HHO1	YPL127C	FLC2	P39719	783 aa		10.96	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms