RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC1	YML031W	STE5	P32917	917 aa		5.53	□□□□□ -1.52
NDC1	YML031W	STE20	Q03497	939 aa	Known RBP	5.53	□□□□□ -1.52
NDC1	YML031W	NBP2	Q12163	236 aa		5.53	□□□□□ -1.52
NDC1	YML031W	CDC42	P19073	191 aa		5.52	□□□□□ -1.53
NDC1	YML031W	SAT4	P25333	603 aa	Known RBP	5.52	□□□□□ -1.53
NDC1	YML031W	LRE1	P25579	583 aa	Known RBP	5.52	□□□□□ -1.53
NDC1	YML031W	VBA3	P25594	458 aa		5.52	□□□□□ -1.53
NDC1	YML031W	VBA5	P36172	582 aa		5.52	□□□□□ -1.53
NDC1	YML031W	GIP1	P38229	639 aa		5.52	□□□□□ -1.53
NDC1	YML031W	CIN4	P39110	191 aa		5.52	□□□□□ -1.53
NDC1	YML031W	CEP3	P40969	608 aa		5.52	□□□□□ -1.53
NDC1	YML031W	CPR7	P47103	393 aa		5.52	□□□□□ -1.53
NDC1	YML031W	GIR2	Q03768	265 aa	Predicted RBP	5.52	□□□□□ -1.53
NDC1	YML031W	GYL1	Q04322	720 aa		5.52	□□□□□ -1.53
NDC1	YML031W	PSE1	P32337	1089 aa	Known RBP	5.51	□□□□□ -1.53
NDC1	YML031W	SAC6	P32599	642 aa	Known RBP	5.51	□□□□□ -1.53
NDC1	YML031W	TCD2	P36101	447 aa	Known RBP	5.51	□□□□□ -1.53
NDC1	YML031W	PCF11	P39081	626 aa	Predicted RBP	5.51	□□□□□ -1.53
NDC1	YML031W	GIP4	P39732	760 aa		5.51	□□□□□ -1.53
NDC1	YML031W	ERG10	P41338	398 aa	Known RBP	5.51	□□□□□ -1.53
NDC1	YML031W	SBE2	P42223	864 aa	Known RBP	5.51	□□□□□ -1.53
NDC1	YML031W	YNR065C	P53751	1116 aa		5.51	□□□□□ -1.53
NDC1	YML031W	JIP5	Q06214	492 aa	Predicted RBP	5.51	□□□□□ -1.53
NDC1	YML031W	FAL1	Q12099	399 aa	Known RBP	5.51	□□□□□ -1.53
NDC1	YML031W	DDP1	Q99321	188 aa	Known RBP	5.51	□□□□□ -1.53
NDC1	YML031W	XRS2	P33301	854 aa		5.51	□□□□□ -1.53
NDC1	YML031W	NOP4	P37838	685 aa	Known RBP	5.51	□□□□□ -1.53
NDC1	YML031W	KIC1	P38692	1080 aa		5.51	□□□□□ -1.53
NDC1	YML031W	FAA3	P39002	694 aa		5.51	□□□□□ -1.53
NDC1	YML031W	FIG4	P42837	879 aa		5.51	□□□□□ -1.53
NDC1	YML031W	COS5	P47187	383 aa		5.51	□□□□□ -1.53
NDC1	YML031W	DDC1	Q08949	612 aa		5.51	□□□□□ -1.53
NDC1	YML031W	LPX1	Q12405	387 aa	Known RBP	5.51	□□□□□ -1.53
NDC1	YML031W	RGR1	P19263	1082 aa		5.5	□□□□□ -1.53
NDC1	YML031W	HSP78	P33416	811 aa		5.5	□□□□□ -1.53
NDC1	YML031W	CTM1	P38818	585 aa		5.5	□□□□□ -1.53
NDC1	YML031W	GDH3	P39708	457 aa		5.5	□□□□□ -1.53
NDC1	YML031W	OSW5	P40219	148 aa		5.5	□□□□□ -1.53
NDC1	YML031W	YIR007W	P40566	764 aa		5.5	□□□□□ -1.53
NDC1	YML031W	CDC1	P40986	491 aa		5.5	□□□□□ -1.53
NDC1	YML031W	YPL014W	Q02606	381 aa		5.5	□□□□□ -1.53
NDC1	YML031W	PPM1	Q04081	328 aa		5.5	□□□□□ -1.53
NDC1	YML031W	SPP382	Q06411	708 aa	Predicted RBP	5.5	□□□□□ -1.53
NDC1	YML031W	ECM3	Q99252	613 aa		5.5	□□□□□ -1.53
NDC1	YML031W	GPA1	P08539	472 aa		5.49	□□□□□ -1.53
NDC1	YML031W	YKT6	P36015	200 aa	Known RBP	5.49	□□□□□ -1.53
NDC1	YML031W	PPX1	P38698	397 aa		5.49	□□□□□ -1.53
NDC1	YML031W	SSP1	P38871	571 aa		5.49	□□□□□ -1.53
NDC1	YML031W	HEM14	P40012	539 aa		5.49	□□□□□ -1.53
NDC1	YML031W	UFE1	P41834	346 aa		5.49	□□□□□ -1.53
NDC1	YML031W	HPF1	Q05164	967 aa		5.49	□□□□□ -1.53
NDC1	YML031W	EAF1	Q06337	982 aa		5.49	□□□□□ -1.53
NDC1	YML031W	RCL1	Q08096	367 aa	Predicted RBP	5.49	□□□□□ -1.53
NDC1	YML031W	YOL075C	Q08234	1294 aa		5.49	□□□□□ -1.53
NDC1	YML031W	APC5	Q08683	685 aa		5.49	□□□□□ -1.53
NDC1	YML031W	YRR1	Q12172	810 aa		5.49	□□□□□ -1.53
NDC1	YML031W	YDL206W	Q12424	762 aa		5.49	□□□□□ -1.53
NDC1	YML031W	GUT1	P32190	709 aa		5.49	□□□□□ -1.53
NDC1	YML031W	ECM13	P38195	257 aa		5.49	□□□□□ -1.53
NDC1	YML031W	YPT35	P38815	214 aa	Known RBP	5.49	□□□□□ -1.53
NDC1	YML031W	YER130C	P39959	443 aa		5.49	□□□□□ -1.53
NDC1	YML031W	VTC4	P47075	721 aa		5.49	□□□□□ -1.53
NDC1	YML031W	VPS60	Q03390	229 aa		5.49	□□□□□ -1.53
NDC1	YML031W	HRD3	Q05787	833 aa		5.49	□□□□□ -1.53
NDC1	YML031W	COG4	Q06096	861 aa		5.49	□□□□□ -1.53
NDC1	YML031W	YOR387C	Q08910	206 aa		5.49	□□□□□ -1.53
NDC1	YML031W	TRE1	Q08919	783 aa		5.49	□□□□□ -1.53
NDC1	YML031W	AI5_BETA	Q9ZZX0	354 aa		5.49	□□□□□ -1.53
NDC1	YML031W	MSF1	P08425	469 aa		5.48	□□□□□ -1.53
NDC1	YML031W	PSO2	P30620	661 aa		5.48	□□□□□ -1.53
NDC1	YML031W	SGE1	P33335	543 aa		5.48	□□□□□ -1.53
NDC1	YML031W	YMC2	P38087	329 aa		5.48	□□□□□ -1.53
NDC1	YML031W	PFD1	P46988	109 aa		5.48	□□□□□ -1.53
NDC1	YML031W	MND1	P53102	219 aa		5.48	□□□□□ -1.53
NDC1	YML031W	YGL036W	P53185	909 aa	Predicted RBP	5.48	□□□□□ -1.53
NDC1	YML031W	LSC2	P53312	427 aa		5.48	□□□□□ -1.53
NDC1	YML031W	COQ6	P53318	479 aa		5.48	□□□□□ -1.53
NDC1	YML031W	VMS1	Q04311	632 aa	Known RBP	5.48	□□□□□ -1.53
NDC1	YML031W	BI4	P03879	638 aa		5.47	□□□□□ -1.53
NDC1	YML031W	RRM3	P38766	723 aa		5.47	□□□□□ -1.53
NDC1	YML031W	BCD1	P38772	366 aa		5.47	□□□□□ -1.53
NDC1	YML031W	PIK1	P39104	1066 aa		5.47	□□□□□ -1.53
NDC1	YML031W	DRN1	P53255	507 aa	Known RBP	5.47	□□□□□ -1.53
NDC1	YML031W	RTN1	Q04947	295 aa	Known RBP	5.47	□□□□□ -1.53
NDC1	YML031W	YDL129W	Q07555	291 aa		5.47	□□□□□ -1.53
NDC1	YML031W	NOP14	Q99207	810 aa	Known RBP	5.47	□□□□□ -1.53
NDC1	YML031W	ENO2	P00925	437 aa	Known RBP	5.47	□□□□□ -1.53
NDC1	YML031W	CDC11	P32458	415 aa		5.47	□□□□□ -1.53
NDC1	YML031W	DUN1	P39009	513 aa		5.47	□□□□□ -1.53
NDC1	YML031W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.47	□□□□□ -1.53	not detected
NDC1	YML031W	YPT11	P48559	417 aa		5.47	□□□□□ -1.53
NDC1	YML031W	NUP84	P52891	726 aa		5.47	□□□□□ -1.53
NDC1	YML031W	TDA7	P53882	636 aa	Predicted RBP	5.47	□□□□□ -1.53
NDC1	YML031W	SMA1	Q02651	245 aa		5.47	□□□□□ -1.53
NDC1	YML031W	YLR297W	Q05899	129 aa		5.47	□□□□□ -1.53
NDC1	YML031W	UTP13	Q05946	817 aa	Known RBP	5.47	□□□□□ -1.53
NDC1	YML031W	VPS54	Q12071	889 aa		5.47	□□□□□ -1.53
NDC1	YML031W	LCB4	Q12246	624 aa		5.47	□□□□□ -1.53
NDC1	YML031W	TFB1	P32776	642 aa		5.46	□□□□□ -1.54
NDC1	YML031W	CSG2	P35206	410 aa		5.46	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms