RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC1YML031W MON2P48563 1636 aaPredicted RBP11.13□□□□□ -0.63
NDC1YML031W INO80P53115 1489 aa11.1□□□□□ -0.63
NDC1YML031W DNA2P38859 1522 aa10.58□□□□□ -0.72
NDC1YML031W SWR1Q05471 1514 aa10.57□□□□□ -0.72
NDC1YML031W TCB3Q03640 1545 aaKnown RBP10.5□□□□□ -0.73
NDC1YML031W TY1B-DR4Q07793 1604 aa10.45□□□□□ -0.74
NDC1YML031W KOG1P38873 1557 aa10.44□□□□□ -0.74
NDC1YML031W SGS1P35187 1447 aa10.28□□□□□ -0.76
NDC1YML031W RSE1Q04693 1361 aaKnown RBP10.22□□□□□ -0.77
NDC1YML031W HSL1P34244 1518 aa10.08□□□□□ -0.8
NDC1YML031W SPT6P23615 1451 aaKnown RBP10.08□□□□□ -0.8
NDC1YML031W SPA2P23201 1466 aaKnown RBP9.98□□□□□ -0.81
NDC1YML031W ECM5Q03214 1411 aa9.88□□□□□ -0.83
NDC1YML031W HIR3P47171 1648 aa9.86□□□□□ -0.83
NDC1YML031W THO2P53552 1597 aaKnown RBP9.81□□□□□ -0.84
NDC1YML031W BUD4P47136 1447 aa9.81□□□□□ -0.84
NDC1YML031W MDS3P53094 1487 aa9.71□□□□□ -0.86
NDC1YML031W MTC1P47018 478 aaKnown RBP9.7□□□□□ -0.86
NDC1YML031W XRN1P22147 1528 aaKnown RBP9.67□□□□□ -0.86
NDC1YML031W PEP1P32319 1579 aa9.61□□□□□ -0.87
NDC1YML031W REV3P14284 1504 aa9.54□□□□□ -0.88
NDC1YML031W ATG2P53855 1592 aa9.53□□□□□ -0.88
NDC1YML031W BPT1P14772 1559 aa9.47□□□□□ -0.89
NDC1YML031W SSN2P38931 1420 aa9.44□□□□□ -0.9
NDC1YML031W SIN3P22579 1536 aa9.38□□□□□ -0.91
NDC1YML031W SKI3P17883 1432 aaKnown RBP9.37□□□□□ -0.91
NDC1YML031W TAF2P23255 1407 aa9.37□□□□□ -0.91
NDC1YML031W SSK2P53599 1579 aa9.34□□□□□ -0.91
NDC1YML031W YCF1P39109 1515 aaKnown RBP9.31□□□□□ -0.92
NDC1YML031W ESP1Q03018 1630 aa9.25□□□□□ -0.93
NDC1YML031W UFD4P33202 1483 aa9.21□□□□□ -0.93
NDC1YML031W SCC2Q04002 1493 aa9.14□□□□□ -0.95
NDC1YML031W YPK9Q12697 1472 aa9.14□□□□□ -0.95
NDC1YML031W DRS1P32892 752 aaKnown RBP9.13□□□□□ -0.95
NDC1YML031W MYO2P19524 1574 aaKnown RBP9.12□□□□□ -0.95
NDC1YML031W RPO31P04051 1460 aa9.08□□□□□ -0.96
NDC1YML031W CDC25P04821 1589 aa9.08□□□□□ -0.96
NDC1YML031W CHD1P32657 1468 aa9.07□□□□□ -0.96
NDC1YML031W MET5P47169 1442 aa9.06□□□□□ -0.96
NDC1YML031W ESC1Q03661 1658 aaKnown RBP9.04□□□□□ -0.96
NDC1YML031W DNF1P32660 1571 aa9.04□□□□□ -0.96
NDC1YML031W TY2B-LR1P0C2J3 1770 aa9.03□□□□□ -0.96
NDC1YML031W TY2B-FP0CX63 1770 aa9.03□□□□□ -0.96
NDC1YML031W TY2B-GR2P0CX64 1770 aa9.03□□□□□ -0.96
NDC1YML031W TY2B-CP25384 1770 aa9.03□□□□□ -0.96
NDC1YML031W TY2B-DR2Q03494 1770 aa9.03□□□□□ -0.96
NDC1YML031W TY1B-DR1Q03855 1755 aa9.03□□□□□ -0.96
NDC1YML031W TY2B-DR3Q07791 1770 aaKnown RBP9.03□□□□□ -0.96
NDC1YML031W TY2B-OR1Q12113 1770 aa9.03□□□□□ -0.96
NDC1YML031W TY2B-DR1Q12472 1770 aa9.03□□□□□ -0.96
NDC1YML031W TY2B-OR2Q12501 1770 aa9.03□□□□□ -0.96
NDC1YML031W TY1B-BRQ12193 1756 aa9.01□□□□□ -0.97
NDC1YML031W TY1B-GR3Q12316 1755 aa9.01□□□□□ -0.97
NDC1YML031W TY1B-ORQ92393 1755 aa9.01□□□□□ -0.97
NDC1YML031W RQC2Q12532 1038 aaKnown RBP9□□□□□ -0.97
NDC1YML031W PAN1P32521 1480 aa8.98□□□□□ -0.97
NDC1YML031W LTE1P07866 1435 aa8.98□□□□□ -0.97
NDC1YML031W RKR1Q04781 1562 aa8.97□□□□□ -0.97
NDC1YML031W MIF2P35201 549 aa8.95□□□□□ -0.98
NDC1YML031W RPA190P10964 1664 aaKnown RBP8.94□□□□□ -0.98
NDC1YML031W TOP2P06786 1428 aaKnown RBP8.94□□□□□ -0.98
NDC1YML031W TY2B-BQ12491 1770 aa8.92□□□□□ -0.98
NDC1YML031W TY1B-HO13535 1793 aa8.91□□□□□ -0.98
NDC1YML031W TY1B-DR5P0C2I2 1755 aa8.91□□□□□ -0.98
NDC1YML031W TY1B-DR6P0C2I3 1755 aa8.91□□□□□ -0.98
NDC1YML031W TY1B-LR2P0C2I5 1755 aa8.91□□□□□ -0.98
NDC1YML031W TY1B-LR3P0C2I6 1755 aaKnown RBP8.91□□□□□ -0.98
NDC1YML031W TY1B-PR1P0C2I9 1755 aaKnown RBP8.91□□□□□ -0.98
NDC1YML031W TY1B-PR2P0C2J0 1756 aa8.91□□□□□ -0.98
NDC1YML031W TY1B-PR3P0C2J1 1755 aaKnown RBP8.91□□□□□ -0.98
NDC1YML031W TY1B-JR1P47098 1755 aa8.91□□□□□ -0.98
NDC1YML031W TY1B-ML2Q03434 1755 aaKnown RBP8.91□□□□□ -0.98
NDC1YML031W TY1B-ER1Q03612 1755 aa8.91□□□□□ -0.98
NDC1YML031W TY1B-ML1Q04711 1755 aaKnown RBP8.91□□□□□ -0.98
NDC1YML031W TY1B-GR2Q12269 1755 aa8.91□□□□□ -0.98
NDC1YML031W TY1B-OLQ12273 1755 aa8.91□□□□□ -0.98
NDC1YML031W TY1B-PLQ12414 1755 aaKnown RBP8.91□□□□□ -0.98
NDC1YML031W TY1B-DR3Q99231 1755 aa8.88□□□□□ -0.99
NDC1YML031W BNI1P41832 1953 aa8.88□□□□□ -0.99
NDC1YML031W MMS22Q06164 1454 aa8.88□□□□□ -0.99
NDC1YML031W GEA2P39993 1459 aaKnown RBP8.87□□□□□ -0.99
NDC1YML031W TRM732Q03496 1420 aa8.84□□□□□ -0.99
NDC1YML031W POL1P13382 1468 aa8.82□□□□□ -1
NDC1YML031W ITT1Q04638 464 aa8.81□□□□□ -1
NDC1YML031W SMC4Q12267 1418 aa8.78□□□□□ -1
NDC1YML031W YRF1-1P0CX20 1796 aa8.76□□□□□ -1.01
NDC1YML031W YRF1-5P0CX21 1796 aa8.76□□□□□ -1.01
NDC1YML031W YRF1-8P0CX22 1796 aa8.76□□□□□ -1.01
NDC1YML031W SPP41P38904 1435 aa8.76□□□□□ -1.01
NDC1YML031W NUP159P40477 1460 aa8.76□□□□□ -1.01
NDC1YML031W YOR1P53049 1477 aa8.76□□□□□ -1.01
NDC1YML031W STU1P38198 1513 aa8.74□□□□□ -1.01
NDC1YML031W ABP1P15891 592 aaKnown RBP8.74□□□□□ -1.01
NDC1YML031W MMS1Q06211 1407 aa8.73□□□□□ -1.01
NDC1YML031W VPS15P22219 1454 aa8.73□□□□□ -1.01
NDC1YML031W TY1B-JR2P47100 1755 aaKnown RBP8.73□□□□□ -1.01
NDC1YML031W TY1B-ER2Q03619 1755 aa8.73□□□□□ -1.01
NDC1YML031W TY1B-MR1Q04214 1755 aa8.73□□□□□ -1.01
NDC1YML031W TY1B-MR2Q04670 1755 aaKnown RBP8.73□□□□□ -1.01
NDC1YML031W TY1B-LR1Q12088 1755 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms