RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeastyeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKT6YKL196C MIP6P38760 659 aaKnown RBP3.83□□□□□ -1.8
YKT6YKL196C HRB1P38922 454 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
YKT6YKL196C ECM1P39715 212 aa3.83□□□□□ -1.8
YKT6YKL196C BUD27P43573 796 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
YKT6YKL196C TEL2P53038 688 aa3.83□□□□□ -1.8
YKT6YKL196C RNH70P53331 553 aa3.83□□□□□ -1.8
YKT6YKL196C ORC4P54791 529 aa3.83□□□□□ -1.8
YKT6YKL196C ARP4P80428 489 aa3.83□□□□□ -1.8
YKT6YKL196C CWC21Q03375 135 aaKnown RBP3.83□□□□□ -1.8
YKT6YKL196C SXM1Q04175 944 aaKnown RBP3.83□□□□□ -1.8
YKT6YKL196C SGO1Q08490 590 aa3.83□□□□□ -1.8
YKT6YKL196C HRP1Q99383 534 aaKnown RBP3.83□□□□□ -1.8
YKT6YKL196C CYB2P00175 591 aa3.82□□□□□ -1.8
YKT6YKL196C SUP35P05453 685 aaKnown RBP3.82□□□□□ -1.8
YKT6YKL196C PEX6P33760 1030 aa3.82□□□□□ -1.8
YKT6YKL196C APL2P36000 726 aaPredicted RBP3.82□□□□□ -1.8
YKT6YKL196C RRN3P36070 627 aa3.82□□□□□ -1.8
YKT6YKL196C TDP1P38319 544 aa3.82□□□□□ -1.8
YKT6YKL196C SFB3P38810 929 aa3.82□□□□□ -1.8
YKT6YKL196C CCT3P39077 534 aaKnown RBP3.82□□□□□ -1.8
YKT6YKL196C RSC8P43609 557 aaKnown RBP3.82□□□□□ -1.8
YKT6YKL196C OCA1P50946 238 aaPredicted RBP3.82□□□□□ -1.8
YKT6YKL196C PAN2P53010 1115 aaPredicted RBP3.82□□□□□ -1.8
YKT6YKL196C AIM14P53109 570 aa3.82□□□□□ -1.8
YKT6YKL196C NHX1Q04121 633 aa3.82□□□□□ -1.8
YKT6YKL196C RRP9Q06506 573 aaKnown RBP3.82□□□□□ -1.8
YKT6YKL196C NTG2Q08214 380 aa3.82□□□□□ -1.8
YKT6YKL196C SNU66Q12420 587 aaPredicted RBP3.82□□□□□ -1.8
YKT6YKL196C NOP14Q99207 810 aaKnown RBP3.82□□□□□ -1.8
YKT6YKL196C SWI6P09959 803 aa3.81□□□□□ -1.8
YKT6YKL196C HMG1P12683 1054 aa3.81□□□□□ -1.8
YKT6YKL196C TSR4P25040 408 aa3.81□□□□□ -1.8
YKT6YKL196C SMY1P32364 656 aaKnown RBP3.81□□□□□ -1.8
YKT6YKL196C MVD1P32377 396 aaKnown RBP3.81□□□□□ -1.8
YKT6YKL196C YKL100CP34248 587 aa3.81□□□□□ -1.8
YKT6YKL196C BYE1P36106 594 aa3.81□□□□□ -1.8
YKT6YKL196C JNM1P36224 373 aa3.81□□□□□ -1.8
YKT6YKL196C HSL7P38274 827 aa3.81□□□□□ -1.8
YKT6YKL196C BFR1P38934 470 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
YKT6YKL196C GET2P40056 285 aa3.81□□□□□ -1.8
YKT6YKL196C YNL195CP40168 261 aa3.81□□□□□ -1.8
YKT6YKL196C SMC3P47037 1230 aa3.81□□□□□ -1.8
YKT6YKL196C JJJ1P53863 590 aa3.81□□□□□ -1.8
YKT6YKL196C YNL058CP53947 316 aa3.81□□□□□ -1.8
YKT6YKL196C DNM1P54861 757 aa3.81□□□□□ -1.8
YKT6YKL196C SSL2Q00578 843 aa3.81□□□□□ -1.8
YKT6YKL196C YML122CQ03207 126 aa3.81□□□□□ -1.8
YKT6YKL196C CTK1Q03957 528 aaKnown RBP3.81□□□□□ -1.8
YKT6YKL196C ARR1Q06596 294 aa3.81□□□□□ -1.8
YKT6YKL196C RTP1Q12751 981 aa3.81□□□□□ -1.8
YKT6YKL196C BRR1Q99177 341 aaPredicted RBP3.81□□□□□ -1.8
YKT6YKL196C SIR3P06701 978 aa3.8□□□□□ -1.8
YKT6YKL196C CDC31P06704 161 aaKnown RBP3.8□□□□□ -1.8
YKT6YKL196C KIN3P22209 435 aa3.8□□□□□ -1.8
YKT6YKL196C KRR1P25586 316 aaPredicted RBP3.8□□□□□ -1.8
YKT6YKL196C PCL2P25693 308 aa3.8□□□□□ -1.8
YKT6YKL196C ANP1P32629 500 aa3.8□□□□□ -1.8
YKT6YKL196C TRZ1P36159 838 aaPredicted RBP3.8□□□□□ -1.8
YKT6YKL196C NUP60P39705 539 aa3.8□□□□□ -1.8
YKT6YKL196C UTP18P40362 594 aaPredicted RBP3.8□□□□□ -1.8
YKT6YKL196C CCT7P42943 550 aaKnown RBP3.8□□□□□ -1.8
YKT6YKL196C TAH11P47112 604 aa3.8□□□□□ -1.8
YKT6YKL196C PCL10P53124 433 aa3.8□□□□□ -1.8
YKT6YKL196C VPS73P53142 486 aaKnown RBP3.8□□□□□ -1.8
YKT6YKL196C SMX3P54999 86 aaPredicted RBP3.8□□□□□ -1.8
YKT6YKL196C LGE1Q02796 332 aaKnown RBP3.8□□□□□ -1.8
YKT6YKL196C UGO1Q03327 502 aa3.8□□□□□ -1.8
YKT6YKL196C ATG33Q06485 197 aa3.8□□□□□ -1.8
YKT6YKL196C YLH47Q06493 454 aa3.8□□□□□ -1.8
YKT6YKL196C YOL057WQ08225 711 aa3.8□□□□□ -1.8
YKT6YKL196C MLH3Q12083 715 aa3.8□□□□□ -1.8
YKT6YKL196C CHD1P32657 1468 aa3.79□□□□□ -1.8
YKT6YKL196C BNR1P40450 1375 aa3.79□□□□□ -1.8
YKT6YKL196C RNR1P21524 888 aaKnown RBP3.79□□□□□ -1.8
YKT6YKL196C APN1P22936 367 aa3.79□□□□□ -1.8
YKT6YKL196C PEX2P32800 271 aa3.79□□□□□ -1.8
YKT6YKL196C PPG1P32838 368 aa3.79□□□□□ -1.8
YKT6YKL196C SEC6P32844 805 aa3.79□□□□□ -1.8
YKT6YKL196C YKR018CP36114 725 aa3.79□□□□□ -1.8
YKT6YKL196C CCL1P37366 393 aa3.79□□□□□ -1.8
YKT6YKL196C UBS1P38290 277 aa3.79□□□□□ -1.8
YKT6YKL196C PAF1P38351 445 aa3.79□□□□□ -1.8
YKT6YKL196C REV7P38927 245 aa3.79□□□□□ -1.8
YKT6YKL196C PES4P39684 611 aa3.79□□□□□ -1.8
YKT6YKL196C MEP1P40260 492 aa3.79□□□□□ -1.8
YKT6YKL196C ATF1P40353 525 aa3.79□□□□□ -1.8
YKT6YKL196C SRB7P47822 140 aa3.79□□□□□ -1.8
YKT6YKL196C EAF7P53911 425 aaKnown RBP3.79□□□□□ -1.8
YKT6YKL196C POB3Q04636 552 aaKnown RBP3.79□□□□□ -1.8
YKT6YKL196C ERV41Q04651 352 aa3.79□□□□□ -1.8
YKT6YKL196C MCM21Q06675 368 aa3.79□□□□□ -1.8
YKT6YKL196C NFI1Q12216 726 aa3.79□□□□□ -1.8
YKT6YKL196C YKL033W-AQ86ZR7 236 aa3.79□□□□□ -1.8
YKT6YKL196C ECM3Q99252 613 aa3.79□□□□□ -1.8
YKT6YKL196C MET6P05694 767 aaKnown RBP3.78□□□□□ -1.8
YKT6YKL196C PYC1P11154 1178 aaKnown RBP3.78□□□□□ -1.8
YKT6YKL196C RED1P14291 827 aa3.78□□□□□ -1.8
YKT6YKL196C CLN1P20437 546 aa3.78□□□□□ -1.8
YKT6YKL196C IME2P32581 645 aa3.78□□□□□ -1.8
YKT6YKL196C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms