RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeastyeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKT6YKL196C MTC1P47018 478 aaKnown RBP12.02□□□□□ -0.49
YKT6YKL196C DRS1P32892 752 aaKnown RBP11.55□□□□□ -0.56
YKT6YKL196C FAP1P53971 965 aa10.49□□□□□ -0.73
YKT6YKL196C DIP2Q12220 943 aaPredicted RBP10.01□□□□□ -0.81
YKT6YKL196C PRI1P10363 409 aa9.97□□□□□ -0.81
YKT6YKL196C PRY3P47033 881 aa9.86□□□□□ -0.83
YKT6YKL196C ISW2Q08773 1120 aa9.86□□□□□ -0.83
YKT6YKL196C AAD16Q02895 342 aa9.85□□□□□ -0.83
YKT6YKL196C RPG1P38249 964 aaKnown RBP9.8□□□□□ -0.84
YKT6YKL196C AVT3P36062 692 aa9.74□□□□□ -0.85
YKT6YKL196C BFR2Q06631 534 aaKnown RBP9.74□□□□□ -0.85
YKT6YKL196C RSE1Q04693 1361 aaKnown RBP9.57□□□□□ -0.88
YKT6YKL196C TSR3Q12094 313 aaKnown RBP9.48□□□□□ -0.89
YKT6YKL196C YCK3P39962 524 aa9.38□□□□□ -0.91
YKT6YKL196C RPL17AP05740 184 aaKnown RBP9.29□□□□□ -0.92
YKT6YKL196C RPL17BP46990 184 aaKnown RBP9.29□□□□□ -0.92
YKT6YKL196C HAA1Q12753 694 aaKnown RBP9.2□□□□□ -0.94
YKT6YKL196C REB1P21538 810 aa9.19□□□□□ -0.94
YKT6YKL196C MRPL32P25348 183 aa9.04□□□□□ -0.96
YKT6YKL196C SPT21P35209 758 aa8.91□□□□□ -0.98
YKT6YKL196C TFA1P36100 482 aa8.77□□□□□ -1.01
YKT6YKL196C YKR023WP36119 530 aaKnown RBP8.75□□□□□ -1.01
YKT6YKL196C CDC27P38042 758 aa8.72□□□□□ -1.01
YKT6YKL196C RIM101P33400 625 aa8.65□□□□□ -1.02
YKT6YKL196C HOP09932 586 aa8.59□□□□□ -1.03
YKT6YKL196C DCD1P06773 312 aa8.57□□□□□ -1.04
YKT6YKL196C YGL015CP33199 130 aa8.56□□□□□ -1.04
YKT6YKL196C TFC8Q12308 588 aa8.55□□□□□ -1.04
YKT6YKL196C OXP1P28273 1286 aa8.41□□□□□ -1.06
YKT6YKL196C MAP2P38174 421 aaKnown RBP8.39□□□□□ -1.07
YKT6YKL196C UBP10P53874 792 aaPredicted RBP8.34□□□□□ -1.07
YKT6YKL196C BCH2P36122 765 aa8.29□□□□□ -1.08
YKT6YKL196C SCY1P53009 804 aa8.27□□□□□ -1.09
YKT6YKL196C PTP3P40048 928 aa8.22□□□□□ -1.09
YKT6YKL196C YIL055CP40523 627 aaKnown RBP8.22□□□□□ -1.09
YKT6YKL196C YAH1Q12184 172 aaKnown RBP8.21□□□□□ -1.1
YKT6YKL196C SLX5P32828 619 aaKnown RBP8.11□□□□□ -1.11
YKT6YKL196C EPS1P40557 701 aa8.11□□□□□ -1.11
YKT6YKL196C RSM7P47150 247 aa8.11□□□□□ -1.11
YKT6YKL196C BDF1P35817 686 aa8.06□□□□□ -1.12
YKT6YKL196C YLR271WQ06152 274 aa8.06□□□□□ -1.12
YKT6YKL196C AI2P03876 854 aa8.03□□□□□ -1.12
YKT6YKL196C SSP1P38871 571 aa8.01□□□□□ -1.13
YKT6YKL196C TIF4632P39936 914 aaKnown RBP7.97□□□□□ -1.13
YKT6YKL196C BBC1P47068 1157 aa7.96□□□□□ -1.14
YKT6YKL196C TGL3P40308 642 aa7.95□□□□□ -1.14
YKT6YKL196C PSD2P53037 1138 aaKnown RBP7.89□□□□□ -1.15
YKT6YKL196C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
YKT6YKL196C CST9Q06032 482 aa7.81□□□□□ -1.16
YKT6YKL196C MRM1P25270 412 aa7.77□□□□□ -1.17
YKT6YKL196C MGA2P40578 1113 aa7.76□□□□□ -1.17
YKT6YKL196C BUD31P25337 157 aaPredicted RBP7.73□□□□□ -1.17
YKT6YKL196C NSR1P27476 414 aaKnown RBP RIP-Chip data7.67□□□□□ -1.18 RIP-Chip
YKT6YKL196C YOR238WQ08634 303 aa7.66□□□□□ -1.18
YKT6YKL196C MST1P07236 462 aa7.65□□□□□ -1.18
YKT6YKL196C YAP5P40574 245 aa7.65□□□□□ -1.18
YKT6YKL196C RCR1P38212 213 aa7.61□□□□□ -1.19
YKT6YKL196C PIB1Q06651 286 aa7.6□□□□□ -1.19
YKT6YKL196C VPS29P38759 282 aa7.59□□□□□ -1.19
YKT6YKL196C RTG3P38165 486 aa7.58□□□□□ -1.2
YKT6YKL196C UBP9P39967 754 aa7.58□□□□□ -1.2
YKT6YKL196C YBL029C-AQ3E756 94 aa7.54□□□□□ -1.2
YKT6YKL196C YFR006WP43590 535 aa7.53□□□□□ -1.2
YKT6YKL196C STS1P38637 319 aa7.51□□□□□ -1.21
YKT6YKL196C YMR1P47147 688 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
YKT6YKL196C DBP1P24784 617 aaKnown RBP7.5□□□□□ -1.21
YKT6YKL196C WSC3Q12215 556 aa7.49□□□□□ -1.21
YKT6YKL196C GTT3P39996 337 aa7.47□□□□□ -1.21
YKT6YKL196C VNX1P42839 908 aa7.45□□□□□ -1.22
YKT6YKL196C RAM2P29703 316 aa7.44□□□□□ -1.22
YKT6YKL196C VMA1P17255 1071 aaKnown RBP7.39□□□□□ -1.23
YKT6YKL196C SIS1P25294 352 aaKnown RBP7.39□□□□□ -1.23
YKT6YKL196C SPP1Q03012 353 aa7.37□□□□□ -1.23
YKT6YKL196C TIF11P38912 153 aaKnown RBP7.33□□□□□ -1.24
YKT6YKL196C SET4P42948 560 aa7.33□□□□□ -1.24
YKT6YKL196C YOL036WQ08206 761 aa7.33□□□□□ -1.24
YKT6YKL196C MAK11P20484 414 aaKnown RBP7.32□□□□□ -1.24
YKT6YKL196C SAM3Q08986 587 aa7.31□□□□□ -1.24
YKT6YKL196C MIF2P35201 549 aa7.28□□□□□ -1.24
YKT6YKL196C EDS1P38073 919 aa7.28□□□□□ -1.24
YKT6YKL196C ULI1P43604 169 aa7.28□□□□□ -1.24
YKT6YKL196C MSB4Q12317 492 aa7.27□□□□□ -1.25
YKT6YKL196C IOC2Q12072 812 aa7.25□□□□□ -1.25
YKT6YKL196C COQ8P27697 501 aa7.24□□□□□ -1.25
YKT6YKL196C TRP5P00931 707 aaKnown RBP7.23□□□□□ -1.25
YKT6YKL196C GYP5Q12344 894 aa7.23□□□□□ -1.25
YKT6YKL196C LDB19Q12502 818 aa7.23□□□□□ -1.25
YKT6YKL196C PTC3P34221 468 aaKnown RBP7.2□□□□□ -1.26
YKT6YKL196C EAP1P36041 632 aaKnown RBP7.2□□□□□ -1.26
YKT6YKL196C DCW1P36091 449 aa7.2□□□□□ -1.26
YKT6YKL196C FKH1P40466 484 aa7.18□□□□□ -1.26
YKT6YKL196C AIR2Q12476 344 aaKnown RBP7.17□□□□□ -1.26
YKT6YKL196C GRE2Q12068 342 aaKnown RBP7.16□□□□□ -1.26
YKT6YKL196C RTG1P32607 177 aa7.14□□□□□ -1.27
YKT6YKL196C HTA1P04911 132 aaKnown RBP7.13□□□□□ -1.27
YKT6YKL196C HTA2P04912 132 aa7.13□□□□□ -1.27
YKT6YKL196C ATH1P48016 1211 aa7.13□□□□□ -1.27
YKT6YKL196C ABP1P15891 592 aaKnown RBP7.12□□□□□ -1.27
YKT6YKL196C SET1P38827 1080 aaKnown RBP7.11□□□□□ -1.27
YKT6YKL196C GUT1P32190 709 aa7.1□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms