RNA–Protein interactions for RNA: YDR200C

VPS64, Transcript of Protein required for cytoplasm to vacuole targeting of proteins, yeast

Gene VPS64, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS64	YDR200C	JHD1	P40034	492 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	RSC8	P43609	557 aa	Known RBP	3.15	□□□□□ -1.91
VPS64	YDR200C	ALG2	P43636	503 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	LIF1	P53150	421 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	ENA2	Q01896	1091 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	MYO5	Q04439	1219 aa	Known RBP	3.15	□□□□□ -1.91
VPS64	YDR200C	SPN1	Q06505	410 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS64	YDR200C	YPR196W	Q06595	470 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	XYL2	Q07993	356 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	ENA5	Q12691	1091 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	YDR524C-B	Q3E6R4	66 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	RAD50	P12753	1312 aa		3.15	□□□□□ -1.91
VPS64	YDR200C	HIP1	P06775	603 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	FUN30	P31380	1131 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	FLR1	P38124	548 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	REG2	P38232	338 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	GIC1	P38785	314 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	LAM1	P38851	1228 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	TPM2	P40414	161 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	SCS3	P53012	380 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	MCM6	P53091	1017 aa	Known RBP	3.14	□□□□□ -1.91
VPS64	YDR200C	HUL5	P53119	910 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	RIM8	P53179	542 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	YGL039W	P53183	348 aa	Known RBP	3.14	□□□□□ -1.91
VPS64	YDR200C	PTA1	Q01329	785 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS64	YDR200C	MSC2	Q03455	724 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	SIZ1	Q04195	904 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	YOL098C	Q12496	1037 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	YDR034W-B	Q6Q5X2	51 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	RPS13	P05756	151 aa	Known RBP	3.14	□□□□□ -1.91
VPS64	YDR200C	RPL8A	P17076	256 aa	Known RBP	3.14	□□□□□ -1.91
VPS64	YDR200C	TOD6	P34219	525 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	YBR284W	P38150	797 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	YAP1801	P38856	637 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	ZRG8	P40021	1076 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	ALD5	P40047	520 aa	Known RBP	3.14	□□□□□ -1.91
VPS64	YDR200C	YER158C	P40095	573 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	FMS1	P50264	508 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	SPT20	P50875	604 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	GTF1	P53260	183 aa	Predicted RBP	3.14	□□□□□ -1.91
VPS64	YDR200C	UTP8	P53276	713 aa	Known RBP	3.14	□□□□□ -1.91
VPS64	YDR200C	NKP2	Q06162	153 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	VIP1	Q06685	1146 aa	Known RBP	3.14	□□□□□ -1.91
VPS64	YDR200C	YPL277C	Q08989	487 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	RIM20	Q12033	661 aa		3.14	□□□□□ -1.91
VPS64	YDR200C	SOD2	P00447	233 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	CIT1	P00890	479 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
VPS64	YDR200C	VAS1	P07806	1104 aa	Known RBP	3.13	□□□□□ -1.91
VPS64	YDR200C	POL3	P15436	1097 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
VPS64	YDR200C	SRP54	P20424	541 aa	Known RBP	3.13	□□□□□ -1.91
VPS64	YDR200C	PWP2	P25635	923 aa	Known RBP	3.13	□□□□□ -1.91
VPS64	YDR200C	SRP101	P32916	621 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	AAP1	P37898	856 aa	Known RBP	3.13	□□□□□ -1.91
VPS64	YDR200C	MEF2	P39677	819 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	SIT1	P39980	628 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	HUL4	P40985	892 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	AZR1	P50080	613 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	PBP1	P53297	722 aa	Known RBP	3.13	□□□□□ -1.91
VPS64	YDR200C	SFB2	P53953	876 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	MDM1	Q01846	1127 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	VPS72	Q03388	795 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	PLB2	Q03674	706 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	DSE3	Q08729	430 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	FLC1	Q08967	793 aa		3.13	□□□□□ -1.91
VPS64	YDR200C	FAB1	P34756	2278 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	SES1	P07284	462 aa	Known RBP	3.12	□□□□□ -1.91
VPS64	YDR200C	MAS2	P11914	482 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	FUB1	P25659	250 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	HBS1	P32769	611 aa	Known RBP	3.12	□□□□□ -1.91
VPS64	YDR200C	YKL091C	P33324	310 aa	Known RBP	3.12	□□□□□ -1.91
VPS64	YDR200C	YHR131C	P38835	850 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	HMF1	P40037	129 aa	Known RBP	3.12	□□□□□ -1.91
VPS64	YDR200C	SGM1	P47166	707 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	MDR1	P53258	950 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	HDA1	P53973	706 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	GCN5	Q03330	439 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	TFC6	Q06339	672 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	SUE1	Q06524	206 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	RXT3	Q07458	294 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	YPR071W	Q12346	211 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	ATG11	Q12527	1178 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	TAD3	Q9URQ3	322 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	SWI6	P09959	803 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	RNR3	P21672	869 aa	Known RBP	3.12	□□□□□ -1.91
VPS64	YDR200C	KIN82	P25341	720 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	NPP1	P25353	742 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	CDC48	P25694	835 aa	Known RBP	3.12	□□□□□ -1.91
VPS64	YDR200C	PEP3	P27801	918 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	RME1	P32338	300 aa	Known RBP	3.12	□□□□□ -1.91
VPS64	YDR200C	BUD2	P33314	1104 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	TSL1	P38427	1098 aa	Known RBP	3.12	□□□□□ -1.91
VPS64	YDR200C	YHR020W	P38708	688 aa	Known RBP	3.12	□□□□□ -1.91
VPS64	YDR200C	OCA5	P38738	679 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	NPP2	P39997	493 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	CSM2	P40465	213 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	MND2	P40577	368 aa		3.12	□□□□□ -1.91
VPS64	YDR200C	RPS7B	P48164	190 aa	Known RBP	3.12	□□□□□ -1.91
VPS64	YDR200C	GCV2	P49095	1034 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms