RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W TYW1Q08960 810 aaKnown RBP8.25□□□□□ -1.09
NDE2YDL085W SGT2Q12118 346 aaKnown RBP8.25□□□□□ -1.09
NDE2YDL085W NCR1Q12200 1170 aa8.25□□□□□ -1.09
NDE2YDL085W CDC42P19073 191 aa8.25□□□□□ -1.09
NDE2YDL085W RNR1P21524 888 aaKnown RBP8.25□□□□□ -1.09
NDE2YDL085W CAP1P28495 268 aaKnown RBP8.25□□□□□ -1.09
NDE2YDL085W KIP2P28743 706 aa8.25□□□□□ -1.09
NDE2YDL085W IRE1P32361 1115 aa8.25□□□□□ -1.09
NDE2YDL085W MMS4P38257 691 aa8.25□□□□□ -1.09
NDE2YDL085W POP4P38336 279 aa8.25□□□□□ -1.09
NDE2YDL085W MSG5P38590 489 aa8.25□□□□□ -1.09
NDE2YDL085W SSP1P38871 571 aa8.25□□□□□ -1.09
NDE2YDL085W ASG1P40467 964 aa8.25□□□□□ -1.09
NDE2YDL085W CTR1P49573 406 aa8.25□□□□□ -1.09
NDE2YDL085W PSP2P50109 593 aaKnown RBP8.25□□□□□ -1.09
NDE2YDL085W ORC5P50874 479 aa8.25□□□□□ -1.09
NDE2YDL085W TFB2Q02939 513 aa8.25□□□□□ -1.09
NDE2YDL085W DUS4Q06063 367 aa8.25□□□□□ -1.09
NDE2YDL085W YML002WP0CF17 737 aa8.24□□□□□ -1.09
NDE2YDL085W SEC14P24280 304 aaKnown RBP8.24□□□□□ -1.09
NDE2YDL085W SEG2P34250 1132 aa8.24□□□□□ -1.09
NDE2YDL085W PBP2P38151 413 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
NDE2YDL085W PCA1P38360 1216 aa8.24□□□□□ -1.09
NDE2YDL085W GUA1P38625 525 aaKnown RBP8.24□□□□□ -1.09
NDE2YDL085W YML6P51998 286 aa8.24□□□□□ -1.09
NDE2YDL085W NNF2P53253 936 aa8.24□□□□□ -1.09
NDE2YDL085W YDR090CQ03193 310 aa8.24□□□□□ -1.09
NDE2YDL085W GRX3Q03835 250 aa8.24□□□□□ -1.09
NDE2YDL085W SHE9Q04172 456 aa8.24□□□□□ -1.09
NDE2YDL085W ACM1Q08981 209 aa8.24□□□□□ -1.09
NDE2YDL085W CDC11P32458 415 aa8.23□□□□□ -1.09
NDE2YDL085W RGD2P43556 714 aa8.23□□□□□ -1.09
NDE2YDL085W HLJ1P48353 224 aa8.23□□□□□ -1.09
NDE2YDL085W ATG1P53104 897 aa8.23□□□□□ -1.09
NDE2YDL085W DOS2P54858 310 aa8.23□□□□□ -1.09
NDE2YDL085W HOT1Q03213 719 aa8.23□□□□□ -1.09
NDE2YDL085W UFO1Q04511 668 aa8.23□□□□□ -1.09
NDE2YDL085W MPC54Q08550 464 aa8.23□□□□□ -1.09
NDE2YDL085W MSC6Q08818 692 aaKnown RBP8.23□□□□□ -1.09
NDE2YDL085W TY3A-GQ12173 290 aa8.23□□□□□ -1.09
NDE2YDL085W TRM11Q12463 433 aa8.23□□□□□ -1.09
NDE2YDL085W TY3A-IQ99219 290 aa8.23□□□□□ -1.09
NDE2YDL085W ECM3Q99252 613 aa8.23□□□□□ -1.09
NDE2YDL085W GCR1P07261 785 aa8.22□□□□□ -1.09
NDE2YDL085W ILV2P07342 687 aaKnown RBP8.22□□□□□ -1.09
NDE2YDL085W IME1P21190 360 aa8.22□□□□□ -1.09
NDE2YDL085W BAS1P22035 811 aa8.22□□□□□ -1.09
NDE2YDL085W VAN1P23642 535 aa8.22□□□□□ -1.09
NDE2YDL085W MVD1P32377 396 aaKnown RBP8.22□□□□□ -1.09
NDE2YDL085W IXR1P33417 597 aa8.22□□□□□ -1.09
NDE2YDL085W STE13P33894 931 aa8.22□□□□□ -1.09
NDE2YDL085W DBP7P36120 742 aaKnown RBP8.22□□□□□ -1.09
NDE2YDL085W YJR142WP47173 342 aa8.22□□□□□ -1.09
NDE2YDL085W ZIP2P53061 704 aa8.22□□□□□ -1.09
NDE2YDL085W NOG2P53742 486 aaKnown RBP8.22□□□□□ -1.09
NDE2YDL085W YNL247WP53852 767 aaKnown RBP8.22□□□□□ -1.09
NDE2YDL085W TRS130Q03660 1102 aa8.22□□□□□ -1.09
NDE2YDL085W VHS3Q08438 674 aa8.22□□□□□ -1.09
NDE2YDL085W ABP140Q08641 628 aaKnown RBP8.22□□□□□ -1.09
NDE2YDL085W YMR085WP0CF18 432 aa8.21□□□□□ -1.09
NDE2YDL085W SCJ1P25303 377 aa8.21□□□□□ -1.09
NDE2YDL085W KIN82P25341 720 aa8.21□□□□□ -1.09
NDE2YDL085W YMC2P38087 329 aa8.21□□□□□ -1.09
NDE2YDL085W PCS60P38137 543 aaKnown RBP RIP-Chip data8.21□□□□□ -1.09not detected
NDE2YDL085W VID24P38263 362 aa8.21□□□□□ -1.09
NDE2YDL085W PCM1P38628 557 aaKnown RBP8.21□□□□□ -1.09
NDE2YDL085W PNT1P38969 423 aa8.21□□□□□ -1.09
NDE2YDL085W COG6P53959 839 aa8.21□□□□□ -1.09
NDE2YDL085W YML020WQ03722 664 aa8.21□□□□□ -1.09
NDE2YDL085W YMR027WQ04371 470 aa8.21□□□□□ -1.09
NDE2YDL085W YDR278CQ05612 105 aa8.21□□□□□ -1.09
NDE2YDL085W ALR1Q08269 859 aa8.21□□□□□ -1.09
NDE2YDL085W GNT1Q12096 491 aa8.21□□□□□ -1.09
NDE2YDL085W RAD3P06839 778 aa8.21□□□□□ -1.1
NDE2YDL085W SSA1P10591 642 aaKnown RBP8.21□□□□□ -1.1
NDE2YDL085W MRPS28P21771 286 aa8.21□□□□□ -1.1
NDE2YDL085W PUF4P25339 888 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
NDE2YDL085W BUD14P27637 709 aa8.21□□□□□ -1.1
NDE2YDL085W GPI10P30777 616 aa8.21□□□□□ -1.1
NDE2YDL085W MRE11P32829 692 aa8.21□□□□□ -1.1
NDE2YDL085W TRM2P33753 639 aa8.21□□□□□ -1.1
NDE2YDL085W APM2P38700 605 aa8.21□□□□□ -1.1
NDE2YDL085W PRM6Q04705 352 aa8.21□□□□□ -1.1
NDE2YDL085W CIR2Q08822 631 aa8.21□□□□□ -1.1
NDE2YDL085W BI2P03873 423 aa8.2□□□□□ -1.1
NDE2YDL085W BI4P03879 638 aa8.2□□□□□ -1.1
NDE2YDL085W EST1P17214 699 aaPredicted RBP8.2□□□□□ -1.1
NDE2YDL085W AEP2P22136 580 aa8.2□□□□□ -1.1
NDE2YDL085W RRT12P25381 491 aa8.2□□□□□ -1.1
NDE2YDL085W SSE1P32589 693 aaKnown RBP8.2□□□□□ -1.1
NDE2YDL085W NOP4P37838 685 aaKnown RBP8.2□□□□□ -1.1
NDE2YDL085W FZO1P38297 855 aa8.2□□□□□ -1.1
NDE2YDL085W TMN3P40071 706 aa8.2□□□□□ -1.1
NDE2YDL085W ARG2P40360 574 aa8.2□□□□□ -1.1
NDE2YDL085W TMA108P40462 946 aa8.2□□□□□ -1.1
NDE2YDL085W SEC26P41810 973 aaKnown RBP8.2□□□□□ -1.1
NDE2YDL085W ACF4P47129 309 aa8.2□□□□□ -1.1
NDE2YDL085W RPS7BP48164 190 aaKnown RBP8.2□□□□□ -1.1
NDE2YDL085W PUS2P53167 370 aa8.2□□□□□ -1.1
NDE2YDL085W YNL144CP53907 740 aa8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms