RNA–Protein interactions for RNA: YCR038C

BUD5, Transcript of GTP/GDP exchange factor for Rsr1p (Bud1p), yeast

Gene BUD5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD5	YCR038C	YKU70	P32807	602 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	RPT3	P33298	428 aa	Known RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	DOM34	P33309	386 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	MCD4	P36051	919 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	DID4	P36108	232 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	APM2	P38700	605 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	OSH7	P38755	437 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	SMC2	P38989	1170 aa	Known RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	GDI1	P39958	451 aa	Known RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	ARB1	P40024	610 aa	Known RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	AIM20	P40451	204 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	UBP6	P43593	499 aa	Known RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	PSP2	P50109	593 aa	Known RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	NNF2	P53253	936 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	CTR9	P89105	1077 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	COG8	Q04632	607 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	HIM1	Q06674	414 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	AI1	P03875	834 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	CDC9	P04819	755 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	CKA1	P15790	372 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	LCB1	P25045	558 aa	Known RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	SPB1	P25582	841 aa	Predicted RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	DAL3	P32459	195 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	PPQ1	P32945	549 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
BUD5	YCR038C	SHM1	P37292	490 aa	Predicted RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	RDH54	P38086	958 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	YBL028C	P38202	106 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	PPE1	P38796	400 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	CTM1	P38818	585 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	FMP10	P40098	244 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	NTA1	P40354	457 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	UBP7	P40453	1071 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	SMK1	P41808	388 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	SAP155	P43612	1002 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	RMD8	P43620	662 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	YJL055W	P47044	245 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	FOL2	P51601	243 aa	Known RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	NUT1	P53114	1132 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	NAM8	Q00539	523 aa	Known RBP	4.25	□□□□□ -1.73
BUD5	YCR038C	RMT2	Q03305	412 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	SKY1	Q03656	742 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	YMR155W	Q03795	547 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	YPQ2	Q06328	317 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	PHO92	Q06390	306 aa		4.25	□□□□□ -1.73
BUD5	YCR038C	GCD1	P09032	578 aa	Predicted RBP	4.24	□□□□□ -1.73
BUD5	YCR038C	TOP3	P13099	656 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	NAM7	P30771	971 aa	Known RBP	4.24	□□□□□ -1.73
BUD5	YCR038C	NIP1	P32497	812 aa	Known RBP	4.24	□□□□□ -1.73
BUD5	YCR038C	CBF2	P32504	956 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	SMI1	P32566	505 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	SLA1	P32790	1244 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	COY1	P34237	679 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	SQT1	P35184	431 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	RER2	P35196	286 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	IRS4	P36115	615 aa	Known RBP	4.24	□□□□□ -1.73
BUD5	YCR038C	CCZ1	P38273	704 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	DPH1	P40487	425 aa	Known RBP	4.24	□□□□□ -1.73
BUD5	YCR038C	MKT1	P40850	830 aa	Known RBP	4.24	□□□□□ -1.73
BUD5	YCR038C	ARF3	P40994	183 aa	RIP-Chip data	4.24	□□□□□ -1.73	RIP-Chip
BUD5	YCR038C	SKP2	P42843	763 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	ZIM17	P42844	174 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	YGR250C	P53316	781 aa	Known RBP	4.24	□□□□□ -1.73
BUD5	YCR038C	YNL165W	P53891	406 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	TEP1	P53916	434 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	YPL071C	Q02864	156 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	HAS1	Q03532	505 aa	Known RBP	4.24	□□□□□ -1.73
BUD5	YCR038C	BMS1	Q08965	1183 aa	Known RBP	4.24	□□□□□ -1.73
BUD5	YCR038C	KCS1	Q12494	1050 aa		4.24	□□□□□ -1.73
BUD5	YCR038C	BI4	P03879	638 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	INO1	P11986	533 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	POL3	P15436	1097 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	CBP3	P21560	335 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	EFB1	P32471	206 aa	Known RBP	4.23	□□□□□ -1.73
BUD5	YCR038C	NGG1	P32494	702 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	HBS1	P32769	611 aa	Known RBP	4.23	□□□□□ -1.73
BUD5	YCR038C	NCL1	P38205	684 aa	Known RBP	4.23	□□□□□ -1.73
BUD5	YCR038C	ECM2	P38241	364 aa	Known RBP	4.23	□□□□□ -1.73
BUD5	YCR038C	UTP9	P38882	575 aa	Known RBP	4.23	□□□□□ -1.73
BUD5	YCR038C	DLD3	P39976	496 aa	Known RBP	4.23	□□□□□ -1.73
BUD5	YCR038C	IMA5	P40884	581 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	ALG2	P43636	503 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	CCM1	P48237	864 aa	Predicted RBP	4.23	□□□□□ -1.73
BUD5	YCR038C	GYP7	P48365	746 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	HOP2	P53187	214 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	MFB1	Q04922	465 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	SMD2	Q06217	110 aa	Known RBP	4.23	□□□□□ -1.73
BUD5	YCR038C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
BUD5	YCR038C	PGA3	Q12746	312 aa	Known RBP	4.23	□□□□□ -1.73
BUD5	YCR038C	YPR053C	Q6Q5F3	151 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	MET5	P47169	1442 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	CDC16	P09798	840 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	ENA1	P13587	1091 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	ERG3	P32353	365 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	MRE11	P32829	692 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	VPS17	P32913	551 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	LOT5	P34234	306 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	SCD5	P34758	872 aa		4.23	□□□□□ -1.73
BUD5	YCR038C	SHM2	P37291	469 aa	Known RBP	4.23	□□□□□ -1.73
BUD5	YCR038C	FIR1	P40020	876 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms