RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W SBE2P42223 864 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W ROG3P43602 733 aa2.18□□□□□ -2.06
HER1YOR227W AIM14P53109 570 aa2.18□□□□□ -2.06
HER1YOR227W SRP1Q02821 542 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W PRP3Q03338 469 aaPredicted RBP2.18□□□□□ -2.06
HER1YOR227W JIP4Q03361 876 aa2.18□□□□□ -2.06
HER1YOR227W YTM1Q12024 460 aaPredicted RBP2.18□□□□□ -2.06
HER1YOR227W IOC2Q12072 812 aa2.18□□□□□ -2.06
HER1YOR227W SCM3Q12334 223 aa2.18□□□□□ -2.06
HER1YOR227W TUS1Q06412 1307 aa2.18□□□□□ -2.06
HER1YOR227W HMG1P12683 1054 aa2.18□□□□□ -2.06
HER1YOR227W SEC18P18759 758 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W PRP19P32523 503 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W TFC3P34111 1160 aa2.18□□□□□ -2.06
HER1YOR227W PTH2P34222 208 aa2.18□□□□□ -2.06
HER1YOR227W YKL151CP36059 337 aa2.18□□□□□ -2.06
HER1YOR227W DYS1P38791 387 aa2.18□□□□□ -2.06
HER1YOR227W AXL2P38928 823 aa2.18□□□□□ -2.06
HER1YOR227W CCT3P39077 534 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W NOP16P40007 231 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W YIL089WP40500 205 aa2.18□□□□□ -2.06
HER1YOR227W GPD2P41911 440 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W MNN11P46985 422 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W CAF120P53836 1060 aa2.18□□□□□ -2.06
HER1YOR227W CNM67P53865 581 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W SYH1Q02875 849 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W RMT2Q03305 412 aa2.18□□□□□ -2.06
HER1YOR227W VTI1Q04338 217 aa2.18□□□□□ -2.06
HER1YOR227W UTP21Q06078 939 aaPredicted RBP2.18□□□□□ -2.06
HER1YOR227W YDL124WQ07551 312 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W YOR296WQ08748 1289 aa2.18□□□□□ -2.06
HER1YOR227W SNF1P06782 633 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W YER152CP10356 443 aa2.18□□□□□ -2.06
HER1YOR227W HOP1P20050 605 aa2.18□□□□□ -2.06
HER1YOR227W RPC53P25441 422 aa2.18□□□□□ -2.06
HER1YOR227W CCR4P31384 837 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W NPL6P32832 435 aa2.18□□□□□ -2.06
HER1YOR227W GIP1P38229 639 aa2.18□□□□□ -2.06
HER1YOR227W GEM1P39722 662 aa2.18□□□□□ -2.06
HER1YOR227W ENT3P47160 408 aa2.18□□□□□ -2.06
HER1YOR227W KXD1P53158 218 aa2.18□□□□□ -2.06
HER1YOR227W YGR283CP53336 341 aaPredicted RBP2.18□□□□□ -2.06
HER1YOR227W CPR6P53691 371 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W TLG1Q03322 224 aa2.18□□□□□ -2.06
HER1YOR227W HLR1Q04429 423 aa2.18□□□□□ -2.06
HER1YOR227W SGD1Q06132 899 aa2.18□□□□□ -2.06
HER1YOR227W TSR2Q06672 205 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W OPY2Q06810 360 aa2.18□□□□□ -2.06
HER1YOR227W TRM8Q12009 286 aa2.18□□□□□ -2.06
HER1YOR227W YPR071WQ12346 211 aa2.18□□□□□ -2.06
HER1YOR227W GRX6Q12438 231 aa2.18□□□□□ -2.06
HER1YOR227W RRP36Q12481 300 aaPredicted RBP2.18□□□□□ -2.06
HER1YOR227W IDI1P15496 288 aa2.17□□□□□ -2.06
HER1YOR227W SDH2P21801 266 aa2.17□□□□□ -2.06
HER1YOR227W SLA1P32790 1244 aa2.17□□□□□ -2.06
HER1YOR227W YHR218WP38899 603 aa2.17□□□□□ -2.06
HER1YOR227W ICP55P40051 511 aa2.17□□□□□ -2.06
HER1YOR227W YGR117CP53270 476 aa2.17□□□□□ -2.06
HER1YOR227W LDB19Q12502 818 aa2.17□□□□□ -2.06
HER1YOR227W RPS21BQ3E754 87 aaKnown RBP2.17□□□□□ -2.06
HER1YOR227W COX11P19516 300 aaKnown RBP2.17□□□□□ -2.06
HER1YOR227W PRP9P19736 530 aaKnown RBP2.17□□□□□ -2.06
HER1YOR227W ERG3P32353 365 aa2.17□□□□□ -2.06
HER1YOR227W PAH1P32567 862 aa2.17□□□□□ -2.06
HER1YOR227W MRT4P33201 236 aaKnown RBP2.17□□□□□ -2.06
HER1YOR227W PIN4P34217 668 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
HER1YOR227W SQT1P35184 431 aa2.17□□□□□ -2.06
HER1YOR227W MDJ1P35191 511 aa2.17□□□□□ -2.06
HER1YOR227W SAH1P39954 449 aaKnown RBP2.17□□□□□ -2.06
HER1YOR227W TMA108P40462 946 aa2.17□□□□□ -2.06
HER1YOR227W ULI1P43604 169 aa2.17□□□□□ -2.06
HER1YOR227W ALG2P43636 503 aa2.17□□□□□ -2.06
HER1YOR227W RTT109Q07794 436 aa2.17□□□□□ -2.06
HER1YOR227W HSP42Q12329 375 aa2.17□□□□□ -2.06
HER1YOR227W RKM4Q12504 494 aa2.17□□□□□ -2.06
HER1YOR227W CSR2Q12734 1121 aa2.17□□□□□ -2.06
HER1YOR227W RET1P22276 1149 aaKnown RBP2.17□□□□□ -2.06
HER1YOR227W CDC60P26637 1090 aaKnown RBP2.17□□□□□ -2.06
HER1YOR227W KRE2P27809 442 aa2.17□□□□□ -2.06
HER1YOR227W YKL050CP35736 922 aa2.17□□□□□ -2.06
HER1YOR227W TFA2P36145 328 aa2.17□□□□□ -2.06
HER1YOR227W RIM4P38741 713 aa2.17□□□□□ -2.06
HER1YOR227W YML6P51998 286 aa2.17□□□□□ -2.06
HER1YOR227W SKP1P52286 194 aa2.17□□□□□ -2.06
HER1YOR227W YNR040WP53736 256 aa2.17□□□□□ -2.06
HER1YOR227W FCP1Q03254 732 aa2.17□□□□□ -2.06
HER1YOR227W UBX2Q04228 584 aa2.17□□□□□ -2.06
HER1YOR227W YLR257WQ06146 321 aaKnown RBP2.17□□□□□ -2.06
HER1YOR227W RSC3Q06639 885 aa2.17□□□□□ -2.06
HER1YOR227W HFI1Q12060 488 aa2.17□□□□□ -2.06
HER1YOR227W APM4Q99186 491 aa2.17□□□□□ -2.06
HER1YOR227W CPA2P03965 1118 aaKnown RBP2.16□□□□□ -2.06
HER1YOR227W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
HER1YOR227W TOM70P07213 617 aaKnown RBP2.16□□□□□ -2.06
HER1YOR227W DBP5P20449 482 aaKnown RBP2.16□□□□□ -2.06
HER1YOR227W KAP122P32767 1081 aa2.16□□□□□ -2.06
HER1YOR227W KTR3P38130 404 aaPredicted RBP2.16□□□□□ -2.06
HER1YOR227W PSY4P38193 441 aa2.16□□□□□ -2.06
HER1YOR227W NPP2P39997 493 aa2.16□□□□□ -2.06
HER1YOR227W YER156CP40093 338 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms