RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	ENV7	Q12003	364 aa		4.15	□□□□□ -1.75
ATG3	YNR007C	HAP1	P0CE41	1502 aa		4.15	□□□□□ -1.75
ATG3	YNR007C	TY3B-G	Q99315	1547 aa		4.15	□□□□□ -1.75
ATG3	YNR007C	GRX1	P25373	110 aa	Known RBP	4.14	□□□□□ -1.75
ATG3	YNR007C	CYS3	P31373	394 aa	Known RBP	4.14	□□□□□ -1.75
ATG3	YNR007C	NGG1	P32494	702 aa		4.14	□□□□□ -1.75
ATG3	YNR007C	VHR1	P40522	640 aa		4.14	□□□□□ -1.75
ATG3	YNR007C	FKH2	P41813	862 aa		4.14	□□□□□ -1.75
ATG3	YNR007C	MUP1	P50276	574 aa		4.14	□□□□□ -1.75
ATG3	YNR007C	ERP6	P53198	216 aa		4.14	□□□□□ -1.75
ATG3	YNR007C	NOG2	P53742	486 aa	Known RBP	4.14	□□□□□ -1.75
ATG3	YNR007C	ASI2	P53895	289 aa		4.14	□□□□□ -1.75
ATG3	YNR007C	PKH1	Q03407	766 aa		4.14	□□□□□ -1.75
ATG3	YNR007C	EAF1	Q06337	982 aa		4.14	□□□□□ -1.75
ATG3	YNR007C	WRS1	Q12109	432 aa	Known RBP	4.14	□□□□□ -1.75
ATG3	YNR007C	HBN1	Q96VH4	193 aa		4.14	□□□□□ -1.75
ATG3	YNR007C	SRB8	P25648	1427 aa		4.13	□□□□□ -1.75
ATG3	YNR007C	USO1	P25386	1790 aa		4.13	□□□□□ -1.75
ATG3	YNR007C	MSD1	P15179	658 aa	Known RBP	4.13	□□□□□ -1.75
ATG3	YNR007C	PRP4	P20053	465 aa	Known RBP	4.13	□□□□□ -1.75
ATG3	YNR007C	RPL8B	P29453	256 aa	Known RBP	4.13	□□□□□ -1.75
ATG3	YNR007C	CUE2	P36075	443 aa	Known RBP	4.13	□□□□□ -1.75
ATG3	YNR007C	NIT3	P49954	291 aa		4.13	□□□□□ -1.75
ATG3	YNR007C	AMA1	P50082	593 aa		4.13	□□□□□ -1.75
ATG3	YNR007C	MRPS35	P53292	345 aa		4.13	□□□□□ -1.75
ATG3	YNR007C	DUS1	P53759	423 aa	Known RBP	4.13	□□□□□ -1.75
ATG3	YNR007C	NAN1	Q02931	896 aa	Known RBP	4.13	□□□□□ -1.75
ATG3	YNR007C	UBX5	Q06682	500 aa		4.13	□□□□□ -1.75
ATG3	YNR007C	BUD21	Q08492	214 aa	Predicted RBP	4.13	□□□□□ -1.75
ATG3	YNR007C	HAL9	Q12180	1030 aa		4.13	□□□□□ -1.75
ATG3	YNR007C	PZF1	P39933	429 aa		4.12	□□□□□ -1.75
ATG3	YNR007C	BDF2	Q07442	638 aa		4.12	□□□□□ -1.75
ATG3	YNR007C	SSF2	Q12153	453 aa	Predicted RBP	4.12	□□□□□ -1.75
ATG3	YNR007C	YSP2	Q06681	1438 aa		4.12	□□□□□ -1.75
ATG3	YNR007C	YBR053C	P38235	358 aa		4.11	□□□□□ -1.75
ATG3	YNR007C	YJL163C	P46996	555 aa		4.11	□□□□□ -1.75
ATG3	YNR007C	MUS81	Q04149	632 aa	Predicted RBP	4.11	□□□□□ -1.75
ATG3	YNR007C	CRR1	Q05790	422 aa		4.11	□□□□□ -1.75
ATG3	YNR007C	MRH1	Q12117	320 aa	Predicted RBP	4.11	□□□□□ -1.75
ATG3	YNR007C	OSH2	Q12451	1283 aa		4.11	□□□□□ -1.75
ATG3	YNR007C	ARE1	P25628	610 aa		4.1	□□□□□ -1.75
ATG3	YNR007C	LGE1	Q02796	332 aa	Known RBP	4.1	□□□□□ -1.75
ATG3	YNR007C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
ATG3	YNR007C	YOR022C	Q12204	715 aa		4.1	□□□□□ -1.75
ATG3	YNR007C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.09	□□□□□ -1.75
ATG3	YNR007C	PRC1	P00729	532 aa		4.09	□□□□□ -1.75
ATG3	YNR007C	HSP60	P19882	572 aa	Known RBP	4.09	□□□□□ -1.75
ATG3	YNR007C	DAL7	P21826	554 aa		4.09	□□□□□ -1.75
ATG3	YNR007C	UBP6	P43593	499 aa	Known RBP	4.09	□□□□□ -1.75
ATG3	YNR007C	SSY5	P47002	699 aa		4.09	□□□□□ -1.75
ATG3	YNR007C	NNF1	P47149	201 aa		4.09	□□□□□ -1.75
ATG3	YNR007C	RIA1	P53893	1110 aa		4.09	□□□□□ -1.75
ATG3	YNR007C	AIM44	Q99299	758 aa		4.09	□□□□□ -1.75
ATG3	YNR007C	TOR1	P35169	2470 aa		4.09	□□□□□ -1.76
ATG3	YNR007C	YLR415C	O13578	112 aa		4.08	□□□□□ -1.76
ATG3	YNR007C	TOP3	P13099	656 aa		4.08	□□□□□ -1.76
ATG3	YNR007C	YBT1	P32386	1661 aa		4.08	□□□□□ -1.76
ATG3	YNR007C	EMC3	P36039	253 aa		4.08	□□□□□ -1.76
ATG3	YNR007C	SAK1	P38990	1142 aa		4.08	□□□□□ -1.76
ATG3	YNR007C	YIR042C	P40586	236 aa		4.08	□□□□□ -1.76
ATG3	YNR007C	DAM1	P53267	343 aa		4.08	□□□□□ -1.76
ATG3	YNR007C	NRG1	Q03125	231 aa		4.08	□□□□□ -1.76
ATG3	YNR007C	NDJ1	Q12366	352 aa		4.08	□□□□□ -1.76
ATG3	YNR007C	GFA1	P14742	717 aa	Known RBP	4.07	□□□□□ -1.76
ATG3	YNR007C	PCL5	P38794	229 aa		4.07	□□□□□ -1.76
ATG3	YNR007C	YJL049W	P47048	450 aa		4.07	□□□□□ -1.76
ATG3	YNR007C	TAD1	P53065	400 aa		4.07	□□□□□ -1.76
ATG3	YNR007C	YGR283C	P53336	341 aa	Predicted RBP	4.07	□□□□□ -1.76
ATG3	YNR007C	RSC3	Q06639	885 aa		4.07	□□□□□ -1.76
ATG3	YNR007C	LAT1	P12695	482 aa	Known RBP	4.06	□□□□□ -1.76
ATG3	YNR007C	RAD4	P14736	754 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	CDC43	P18898	376 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	YCL002C	P25565	263 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	SAP190	P36123	1033 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	GGA2	P38817	585 aa	Known RBP	4.06	□□□□□ -1.76
ATG3	YNR007C	HUL4	P40985	892 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	PFA3	P42836	336 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	GYP8	P43570	497 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	HSV2	P50079	448 aa	Predicted RBP	4.06	□□□□□ -1.76
ATG3	YNR007C	LRS4	Q04087	347 aa	Known RBP	4.06	□□□□□ -1.76
ATG3	YNR007C	REH1	Q06709	432 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	YDL124W	Q07551	312 aa	Known RBP	4.06	□□□□□ -1.76
ATG3	YNR007C	IRC13	Q08630	104 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	THI21	Q08975	551 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	SUT2	Q12286	268 aa		4.06	□□□□□ -1.76
ATG3	YNR007C	CIT1	P00890	479 aa		4.05	□□□□□ -1.76
ATG3	YNR007C	TDP1	P38319	544 aa		4.05	□□□□□ -1.76
ATG3	YNR007C	VPS73	P53142	486 aa	Known RBP	4.05	□□□□□ -1.76
ATG3	YNR007C	YGR125W	P53273	1036 aa		4.05	□□□□□ -1.76
ATG3	YNR007C	ORC1	P54784	914 aa	Predicted RBP	4.05	□□□□□ -1.76
ATG3	YNR007C	SGO1	Q08490	590 aa		4.05	□□□□□ -1.76
ATG3	YNR007C	ATG11	Q12527	1178 aa		4.05	□□□□□ -1.76
ATG3	YNR007C	HCA4	P20448	770 aa	Known RBP	4.04	□□□□□ -1.76
ATG3	YNR007C	PAF1	P38351	445 aa		4.04	□□□□□ -1.76
ATG3	YNR007C	SIC1	P38634	284 aa		4.04	□□□□□ -1.76
ATG3	YNR007C	OCA5	P38738	679 aa		4.04	□□□□□ -1.76
ATG3	YNR007C	SET5	P38890	526 aa	Known RBP	4.04	□□□□□ -1.76
ATG3	YNR007C	FMP52	P40008	231 aa		4.04	□□□□□ -1.76
ATG3	YNR007C	TAH11	P47112	604 aa		4.04	□□□□□ -1.76
ATG3	YNR007C	SSL2	Q00578	843 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms