RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W MSR1P38714 643 aa9.46□□□□□ -0.89
SFP1YLR403W RRM3P38766 723 aa9.46□□□□□ -0.89
SFP1YLR403W PCF11P39081 626 aaPredicted RBP9.46□□□□□ -0.89
SFP1YLR403W RCY1P39531 840 aa9.46□□□□□ -0.89
SFP1YLR403W AST2P39945 430 aaKnown RBP9.46□□□□□ -0.89
SFP1YLR403W RPH1P39956 796 aa9.46□□□□□ -0.89
SFP1YLR403W JLP2P40206 208 aa9.46□□□□□ -0.89
SFP1YLR403W CST6P40535 587 aa9.46□□□□□ -0.89
SFP1YLR403W TMA22P47089 198 aaPredicted RBP9.46□□□□□ -0.89
SFP1YLR403W MDE1P47095 244 aa9.46□□□□□ -0.89
SFP1YLR403W GOR1P53839 350 aa9.46□□□□□ -0.89
SFP1YLR403W HEF3P53978 1044 aaKnown RBP9.46□□□□□ -0.89
SFP1YLR403W ATP25Q03153 612 aa9.46□□□□□ -0.89
SFP1YLR403W GRC3Q07845 632 aa9.46□□□□□ -0.89
SFP1YLR403W MCM3P24279 971 aaKnown RBP9.46□□□□□ -0.9
SFP1YLR403W RDS1P25611 832 aa9.46□□□□□ -0.9
SFP1YLR403W YIL055CP40523 627 aaKnown RBP9.46□□□□□ -0.9
SFP1YLR403W ACF4P47129 309 aa9.46□□□□□ -0.9
SFP1YLR403W RFX1P48743 811 aa9.46□□□□□ -0.9
SFP1YLR403W NUP42P49686 430 aaKnown RBP9.46□□□□□ -0.9
SFP1YLR403W RPM2Q02773 1202 aa9.46□□□□□ -0.9
SFP1YLR403W ARP9Q05123 467 aa9.46□□□□□ -0.9
SFP1YLR403W DTD1Q07648 150 aaKnown RBP9.46□□□□□ -0.9
SFP1YLR403W OSW1Q08692 278 aa9.46□□□□□ -0.9
SFP1YLR403W SNT2P53127 1403 aa9.45□□□□□ -0.9
SFP1YLR403W SUP45P12385 437 aaKnown RBP9.45□□□□□ -0.9
SFP1YLR403W RED1P14291 827 aa9.45□□□□□ -0.9
SFP1YLR403W MSD1P15179 658 aaKnown RBP9.45□□□□□ -0.9
SFP1YLR403W HSP60P19882 572 aaKnown RBP9.45□□□□□ -0.9
SFP1YLR403W PGS1P25578 521 aa9.45□□□□□ -0.9
SFP1YLR403W MAL33P38157 468 aa9.45□□□□□ -0.9
SFP1YLR403W AVT6P40074 448 aa9.45□□□□□ -0.9
SFP1YLR403W GPD2P41911 440 aaKnown RBP9.45□□□□□ -0.9
SFP1YLR403W ZIP2P53061 704 aa9.45□□□□□ -0.9
SFP1YLR403W ALF1P53904 254 aa9.45□□□□□ -0.9
SFP1YLR403W HAS1Q03532 505 aaKnown RBP9.45□□□□□ -0.9
SFP1YLR403W SPC24Q04477 213 aa9.45□□□□□ -0.9
SFP1YLR403W GLO2Q05584 274 aa9.45□□□□□ -0.9
SFP1YLR403W URA4P20051 364 aa9.44□□□□□ -0.9
SFP1YLR403W PWP1P21304 576 aaKnown RBP9.44□□□□□ -0.9
SFP1YLR403W PRP19P32523 503 aaKnown RBP9.44□□□□□ -0.9
SFP1YLR403W APE4P38821 490 aa9.44□□□□□ -0.9
SFP1YLR403W OAF1P39720 1047 aaPredicted RBP9.44□□□□□ -0.9
SFP1YLR403W UBP6P43593 499 aaKnown RBP9.44□□□□□ -0.9
SFP1YLR403W STR2P47164 639 aa9.44□□□□□ -0.9
SFP1YLR403W YGR016WP53209 190 aa9.44□□□□□ -0.9
SFP1YLR403W RBG2P53295 368 aaKnown RBP9.44□□□□□ -0.9
SFP1YLR403W HXT17P53631 564 aa9.44□□□□□ -0.9
SFP1YLR403W ORC4P54791 529 aa9.44□□□□□ -0.9
SFP1YLR403W NKP2Q06162 153 aa9.44□□□□□ -0.9
SFP1YLR403W EAF1Q06337 982 aa9.44□□□□□ -0.9
SFP1YLR403W LOT6Q07923 191 aa9.44□□□□□ -0.9
SFP1YLR403W RPN8Q08723 338 aaKnown RBP9.44□□□□□ -0.9
SFP1YLR403W GYP5Q12344 894 aa9.44□□□□□ -0.9
SFP1YLR403W PDR12Q02785 1511 aa9.44□□□□□ -0.9
SFP1YLR403W COQ4O13525 335 aa9.44□□□□□ -0.9
SFP1YLR403W KIN3P22209 435 aa9.44□□□□□ -0.9
SFP1YLR403W TDP1P38319 544 aa9.44□□□□□ -0.9
SFP1YLR403W DLD3P39976 496 aaKnown RBP9.44□□□□□ -0.9
SFP1YLR403W SEC28P40509 296 aaKnown RBP9.44□□□□□ -0.9
SFP1YLR403W MAL11P53048 616 aa9.44□□□□□ -0.9
SFP1YLR403W MMT1Q03218 510 aa9.44□□□□□ -0.9
SFP1YLR403W FCP1Q03254 732 aa9.44□□□□□ -0.9
SFP1YLR403W RGC1Q06108 1083 aaKnown RBP9.44□□□□□ -0.9
SFP1YLR403W YPL191CQ08930 360 aa9.44□□□□□ -0.9
SFP1YLR403W THP3Q12049 470 aaKnown RBP9.44□□□□□ -0.9
SFP1YLR403W UTP10P42945 1769 aaKnown RBP9.44□□□□□ -0.9
SFP1YLR403W VMA2P16140 517 aaKnown RBP9.43□□□□□ -0.9
SFP1YLR403W PRP4P20053 465 aaKnown RBP9.43□□□□□ -0.9
SFP1YLR403W ASF2P32448 525 aaPredicted RBP9.43□□□□□ -0.9
SFP1YLR403W SMC1P32908 1225 aa9.43□□□□□ -0.9
SFP1YLR403W FYV10P40492 516 aa9.43□□□□□ -0.9
SFP1YLR403W LYS14P40971 790 aa9.43□□□□□ -0.9
SFP1YLR403W VMA10P48836 114 aaKnown RBP9.43□□□□□ -0.9
SFP1YLR403W ZPR1P53303 486 aaKnown RBP9.43□□□□□ -0.9
SFP1YLR403W VHS3Q08438 674 aa9.43□□□□□ -0.9
SFP1YLR403W YDL109CQ12103 647 aa9.43□□□□□ -0.9
SFP1YLR403W YPR022CQ12139 1133 aa9.43□□□□□ -0.9
SFP1YLR403W MCD1Q12158 566 aa9.43□□□□□ -0.9
SFP1YLR403W YOR1P53049 1477 aa9.43□□□□□ -0.9
SFP1YLR403W TRK1P12685 1235 aa9.43□□□□□ -0.9
SFP1YLR403W TEC1P18412 486 aa9.43□□□□□ -0.9
SFP1YLR403W ACE2P21192 770 aa9.43□□□□□ -0.9
SFP1YLR403W VPS3P23643 1011 aa9.43□□□□□ -0.9
SFP1YLR403W LCB1P25045 558 aaKnown RBP9.43□□□□□ -0.9
SFP1YLR403W CRM1P30822 1084 aaKnown RBP9.43□□□□□ -0.9
SFP1YLR403W PYC2P32327 1180 aaKnown RBP9.43□□□□□ -0.9
SFP1YLR403W RTC3P38804 111 aaPredicted RBP9.43□□□□□ -0.9
SFP1YLR403W HAL5P38970 855 aaKnown RBP9.43□□□□□ -0.9
SFP1YLR403W MCM6P53091 1017 aaKnown RBP9.43□□□□□ -0.9
SFP1YLR403W LAP3Q01532 483 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
SFP1YLR403W TBF1Q02457 562 aa9.43□□□□□ -0.9
SFP1YLR403W SGT1Q08446 395 aa9.43□□□□□ -0.9
SFP1YLR403W RIB2Q12362 591 aaKnown RBP9.43□□□□□ -0.9
SFP1YLR403W TY1B-JR2P47100 1755 aaKnown RBP9.42□□□□□ -0.9
SFP1YLR403W TY1B-ER2Q03619 1755 aa9.42□□□□□ -0.9
SFP1YLR403W TY1B-MR1Q04214 1755 aa9.42□□□□□ -0.9
SFP1YLR403W TY1B-MR2Q04670 1755 aaKnown RBP9.42□□□□□ -0.9
SFP1YLR403W TY1B-LR1Q12088 1755 aaKnown RBP9.42□□□□□ -0.9
SFP1YLR403W TY1B-NL1Q12112 1755 aa9.42□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 81.8 ms