RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C EHT1P38295 451 aa1.96□□□□□ -2.1
IRC20YLR247C OAF1P39720 1047 aaPredicted RBP1.96□□□□□ -2.1
IRC20YLR247C MAD1P40957 749 aa1.96□□□□□ -2.1
IRC20YLR247C BRO1P48582 844 aa1.96□□□□□ -2.1
IRC20YLR247C CTR1P49573 406 aa1.96□□□□□ -2.1
IRC20YLR247C NUP42P49686 430 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C ALT1P52893 592 aa1.96□□□□□ -2.1
IRC20YLR247C KRE33P53914 1056 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C ENT2Q05785 613 aa1.96□□□□□ -2.1
IRC20YLR247C UBR1P19812 1950 aa1.96□□□□□ -2.1
IRC20YLR247C RAD16P31244 790 aa1.96□□□□□ -2.1
IRC20YLR247C YEL043WP32618 956 aa1.96□□□□□ -2.1
IRC20YLR247C PEP12P32854 288 aa1.96□□□□□ -2.1
IRC20YLR247C LAM1P38851 1228 aa1.96□□□□□ -2.1
IRC20YLR247C RAD55P38953 406 aa1.96□□□□□ -2.1
IRC20YLR247C RLP7P40693 322 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C OSW7P43611 510 aa1.96□□□□□ -2.1
IRC20YLR247C JJJ3P47138 172 aa1.96□□□□□ -2.1
IRC20YLR247C SLU7Q02775 382 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C MUK1Q02866 612 aa1.96□□□□□ -2.1
IRC20YLR247C HOS3Q02959 697 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C RRP9Q06506 573 aaKnown RBP1.96□□□□□ -2.1
IRC20YLR247C ADY3Q07732 790 aa1.96□□□□□ -2.1
IRC20YLR247C ACC1Q00955 2233 aaKnown RBP1.95□□□□□ -2.1
IRC20YLR247C LAT1P12695 482 aaKnown RBP1.95□□□□□ -2.1
IRC20YLR247C PRI2P20457 528 aa1.95□□□□□ -2.1
IRC20YLR247C VPH1P32563 840 aaKnown RBP1.95□□□□□ -2.1
IRC20YLR247C MDL2P33311 773 aa1.95□□□□□ -2.1
IRC20YLR247C LEU5P38702 357 aa1.95□□□□□ -2.1
IRC20YLR247C PAN5P38787 379 aa1.95□□□□□ -2.1
IRC20YLR247C RRP8P38961 392 aaKnown RBP1.95□□□□□ -2.1
IRC20YLR247C VID28P40547 921 aa1.95□□□□□ -2.1
IRC20YLR247C RSM26P47141 266 aa1.95□□□□□ -2.1
IRC20YLR247C YJR115WP47152 169 aa1.95□□□□□ -2.1
IRC20YLR247C ELC1Q03071 99 aa1.95□□□□□ -2.1
IRC20YLR247C CEF1Q03654 590 aaPredicted RBP1.95□□□□□ -2.1
IRC20YLR247C HDA3Q06623 655 aa1.95□□□□□ -2.1
IRC20YLR247C TMA17Q12513 150 aa1.95□□□□□ -2.1
IRC20YLR247C PCD1Q12524 340 aa1.95□□□□□ -2.1
IRC20YLR247C SMC6Q12749 1114 aa1.95□□□□□ -2.1
IRC20YLR247C NOP14Q99207 810 aaKnown RBP1.95□□□□□ -2.1
IRC20YLR247C GLN3P18494 730 aa1.95□□□□□ -2.1
IRC20YLR247C MLS1P30952 554 aa1.95□□□□□ -2.1
IRC20YLR247C SWH1P35845 1188 aa1.95□□□□□ -2.1
IRC20YLR247C RRN3P36070 627 aa1.95□□□□□ -2.1
IRC20YLR247C FMO1P38866 432 aa1.95□□□□□ -2.1
IRC20YLR247C PCF11P39081 626 aaPredicted RBP1.95□□□□□ -2.1
IRC20YLR247C YEL025CP39991 1188 aa1.95□□□□□ -2.1
IRC20YLR247C HST2P53686 357 aa1.95□□□□□ -2.1
IRC20YLR247C TOF1P53840 1238 aa1.95□□□□□ -2.1
IRC20YLR247C TDA7P53882 636 aaPredicted RBP1.95□□□□□ -2.1
IRC20YLR247C HDA1P53973 706 aa1.95□□□□□ -2.1
IRC20YLR247C SLG1P54867 378 aa1.95□□□□□ -2.1
IRC20YLR247C PEX19Q07418 342 aa1.95□□□□□ -2.1
IRC20YLR247C TAH18Q12181 623 aa1.95□□□□□ -2.1
IRC20YLR247C MED11Q99278 115 aa1.95□□□□□ -2.1
IRC20YLR247C REV1P12689 985 aa1.95□□□□□ -2.1
IRC20YLR247C PRP9P19736 530 aaKnown RBP1.95□□□□□ -2.1
IRC20YLR247C PRP28P23394 588 aa1.95□□□□□ -2.1
IRC20YLR247C YCL049CP25577 312 aa1.95□□□□□ -2.1
IRC20YLR247C DEP1P31385 405 aa1.95□□□□□ -2.1
IRC20YLR247C DRE2P36152 348 aa1.95□□□□□ -2.1
IRC20YLR247C ISW1P38144 1129 aa1.95□□□□□ -2.1
IRC20YLR247C BCD1P38772 366 aa1.95□□□□□ -2.1
IRC20YLR247C CCT2P39076 527 aaKnown RBP1.95□□□□□ -2.1
IRC20YLR247C POL32P47110 350 aa1.95□□□□□ -2.1
IRC20YLR247C COG6P53959 839 aa1.95□□□□□ -2.1
IRC20YLR247C DBP9Q06218 594 aaKnown RBP1.95□□□□□ -2.1
IRC20YLR247C ARP7Q12406 477 aa1.95□□□□□ -2.1
IRC20YLR247C NOT3P06102 836 aaKnown RBP1.94□□□□□ -2.1
IRC20YLR247C STE11P23561 717 aa1.94□□□□□ -2.1
IRC20YLR247C CDC3P32457 520 aaKnown RBP1.94□□□□□ -2.1
IRC20YLR247C RMD8P43620 662 aa1.94□□□□□ -2.1
IRC20YLR247C MDR1P53258 950 aa1.94□□□□□ -2.1
IRC20YLR247C NAN1Q02931 896 aaKnown RBP1.94□□□□□ -2.1
IRC20YLR247C UTP5Q04177 643 aaKnown RBP1.94□□□□□ -2.1
IRC20YLR247C UFO1Q04511 668 aa1.94□□□□□ -2.1
IRC20YLR247C VHS3Q08438 674 aa1.94□□□□□ -2.1
IRC20YLR247C MET22P32179 357 aa1.94□□□□□ -2.1
IRC20YLR247C KAR9P32526 644 aa1.94□□□□□ -2.1
IRC20YLR247C MKS1P34072 584 aa1.94□□□□□ -2.1
IRC20YLR247C SCD5P34758 872 aa1.94□□□□□ -2.1
IRC20YLR247C RRP1P35178 278 aaPredicted RBP1.94□□□□□ -2.1
IRC20YLR247C SPC34P36131 295 aa1.94□□□□□ -2.1
IRC20YLR247C UBP13P38187 747 aa1.94□□□□□ -2.1
IRC20YLR247C DLD3P39976 496 aaKnown RBP1.94□□□□□ -2.1
IRC20YLR247C ESL1P40456 1118 aa1.94□□□□□ -2.1
IRC20YLR247C ARF3P40994 183 aaRIP-Chip data1.94□□□□□ -2.1 RIP-Chip
IRC20YLR247C NUP84P52891 726 aa1.94□□□□□ -2.1
IRC20YLR247C HUL5P53119 910 aa1.94□□□□□ -2.1
IRC20YLR247C LSC2P53312 427 aa1.94□□□□□ -2.1
IRC20YLR247C YNL058CP53947 316 aa1.94□□□□□ -2.1
IRC20YLR247C NPL3Q01560 414 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
IRC20YLR247C NOC4Q06512 552 aaPredicted RBP1.94□□□□□ -2.1
IRC20YLR247C SFI1Q12369 946 aa1.94□□□□□ -2.1
IRC20YLR247C SNF1P06782 633 aaKnown RBP1.94□□□□□ -2.1
IRC20YLR247C SAM2P19358 384 aaKnown RBP1.94□□□□□ -2.1
IRC20YLR247C KIN3P22209 435 aa1.94□□□□□ -2.1
IRC20YLR247C RPC82P32349 654 aa1.94□□□□□ -2.1
IRC20YLR247C VPS21P36017 210 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 134.3 ms