RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B TUB4P53378 473 aa3.77□□□□□ -1.81
YLR227W-BYLR227W-B MEF1P25039 761 aa3.77□□□□□ -1.81
YLR227W-BYLR227W-B TSA1P34760 196 aaKnown RBP3.77□□□□□ -1.81
YLR227W-BYLR227W-B CTM1P38818 585 aa3.77□□□□□ -1.81
YLR227W-BYLR227W-B YAP1801P38856 637 aa3.77□□□□□ -1.81
YLR227W-BYLR227W-B OSW7P43611 510 aa3.77□□□□□ -1.81
YLR227W-BYLR227W-B PDS5Q04264 1277 aa3.77□□□□□ -1.81
YLR227W-BYLR227W-B SMD2Q06217 110 aaKnown RBP3.77□□□□□ -1.81
YLR227W-BYLR227W-B SAC6P32599 642 aaKnown RBP3.77□□□□□ -1.81
YLR227W-BYLR227W-B EBP2P36049 427 aaKnown RBP3.77□□□□□ -1.81
YLR227W-BYLR227W-B SEO1P39709 593 aa3.77□□□□□ -1.81
YLR227W-BYLR227W-B COQ6P53318 479 aa3.77□□□□□ -1.81
YLR227W-BYLR227W-B YHM2Q04013 314 aa3.77□□□□□ -1.81
YLR227W-BYLR227W-B SVS1Q12254 260 aa3.77□□□□□ -1.81
YLR227W-BYLR227W-B RPO26P20435 155 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B LRE1P25579 583 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B CCR4P31384 837 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B DOM34P33309 386 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B SAW1P39735 261 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B ECL1P48235 211 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B HSV2P50079 448 aaPredicted RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B MKC7P53379 596 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B NOB1Q08444 459 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B HRP1Q99383 534 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B TUF1P02992 437 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B SAM1P10659 382 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B UBP13P38187 747 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B INP51P40559 946 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B CUL3P53202 744 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B UFD2P54860 961 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B SPH1Q06160 661 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B CIR2Q08822 631 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B YKL075CP36083 450 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B RFS1P38234 210 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B SNF7P39929 240 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B RPS10BP46784 105 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B YDL186WP48568 277 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B RPS10AQ08745 105 aaPredicted RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B YVC1Q12324 675 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B TUB2P02557 457 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B YCP4P25349 247 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B RDS1P25611 832 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B YGR250CP53316 781 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B PPN1Q04119 674 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B PRM6Q04705 352 aa3.76□□□□□ -1.81
YLR227W-BYLR227W-B CLP1Q08685 445 aaPredicted RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B LEU9Q12166 604 aaKnown RBP3.76□□□□□ -1.81
YLR227W-BYLR227W-B RPT3P33298 428 aaKnown RBP3.75□□□□□ -1.81
YLR227W-BYLR227W-B YIR016WP40572 265 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B LCB5Q06147 687 aaKnown RBP3.75□□□□□ -1.81
YLR227W-BYLR227W-B LEA1Q08963 238 aaPredicted RBP3.75□□□□□ -1.81
YLR227W-BYLR227W-B PLP2Q12017 286 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B GNT1Q12096 491 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B ERP3Q12403 225 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B NHA1Q99271 985 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B UME6P39001 836 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B MGA2P40578 1113 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B YDR541CQ03049 344 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B SHE9Q04172 456 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B FLC1Q08967 793 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B SEY1Q99287 776 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B SCP160P06105 1222 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
YLR227W-BYLR227W-B NIP1P32497 812 aaKnown RBP3.75□□□□□ -1.81
YLR227W-BYLR227W-B SKT5P34226 696 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B HEL1P36113 551 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B VTA1Q06263 330 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B TY1B-BRQ12193 1756 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B TY1B-GR3Q12316 1755 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B TY1B-ORQ92393 1755 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B SPE1P08432 466 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B RGR1P19263 1082 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B TTI1P36097 1038 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B CIR1P42940 261 aa3.75□□□□□ -1.81
YLR227W-BYLR227W-B RSR1P13856 272 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B MET4P32389 672 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B ALG3P38179 458 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B FMP23P38231 175 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B YTP1P53584 459 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B ADA2Q02336 434 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B VPS30Q02948 557 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B GLO2Q05584 274 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B GUD1Q07729 489 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B ETT1Q08421 412 aaKnown RBP3.74□□□□□ -1.81
YLR227W-BYLR227W-B RDS2P19541 446 aaKnown RBP3.74□□□□□ -1.81
YLR227W-BYLR227W-B MKT1P40850 830 aaKnown RBP3.74□□□□□ -1.81
YLR227W-BYLR227W-B GCV1P48015 400 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B SAM2P19358 384 aaKnown RBP3.74□□□□□ -1.81
YLR227W-BYLR227W-B MRM1P25270 412 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B MSH3P25336 1018 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B RTT107P38850 1070 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B NUP60P39705 539 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B YNL034WP53963 612 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B YNL018CP53976 612 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B EMG1Q06287 252 aaKnown RBP3.74□□□□□ -1.81
YLR227W-BYLR227W-B LAM1P38851 1228 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B KEL1P38853 1164 aaKnown RBP3.74□□□□□ -1.81
YLR227W-BYLR227W-B YFT2Q06676 274 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B ALR1Q08269 859 aa3.74□□□□□ -1.81
YLR227W-BYLR227W-B PAT1P25644 796 aaKnown RBP3.73□□□□□ -1.81
YLR227W-BYLR227W-B YIM1P28625 365 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms