RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YGR161W-CQ3E744 92 aa5.32□□□□□ -1.56
SDS3YIL084C NOP14Q99207 810 aaKnown RBP5.32□□□□□ -1.56
SDS3YIL084C DAL7P21826 554 aa5.31□□□□□ -1.56
SDS3YIL084C YKR011CQ02209 353 aa5.31□□□□□ -1.56
SDS3YIL084C GCN5Q03330 439 aa5.31□□□□□ -1.56
SDS3YIL084C GPB1Q08886 897 aa5.31□□□□□ -1.56
SDS3YIL084C VBA3P25594 458 aa5.3□□□□□ -1.56
SDS3YIL084C YPT53P36019 220 aa5.3□□□□□ -1.56
SDS3YIL084C SAP190P36123 1033 aa5.3□□□□□ -1.56
SDS3YIL084C TAD1P53065 400 aa5.3□□□□□ -1.56
SDS3YIL084C PUS2P53167 370 aa5.3□□□□□ -1.56
SDS3YIL084C RSC3Q06639 885 aa5.3□□□□□ -1.56
SDS3YIL084C NUP192P47054 1683 aa5.3□□□□□ -1.56
SDS3YIL084C MEF1P25039 761 aa5.29□□□□□ -1.56
SDS3YIL084C CYS3P31373 394 aaKnown RBP5.29□□□□□ -1.56
SDS3YIL084C STO1P34160 861 aaKnown RBP5.29□□□□□ -1.56
SDS3YIL084C YIL108WP40483 696 aaKnown RBP5.29□□□□□ -1.56
SDS3YIL084C MET12P46151 657 aa5.29□□□□□ -1.56
SDS3YIL084C ADY3Q07732 790 aa5.29□□□□□ -1.56
SDS3YIL084C TY4B-HP0C2J7 1802 aa5.29□□□□□ -1.56
SDS3YIL084C TY4B-JP47024 1803 aa5.29□□□□□ -1.56
SDS3YIL084C URB1P34241 1764 aaKnown RBP5.29□□□□□ -1.56
SDS3YIL084C EMC1P25574 760 aa5.28□□□□□ -1.56
SDS3YIL084C MTC2P34246 357 aa5.28□□□□□ -1.56
SDS3YIL084C RPN11P43588 306 aaKnown RBP5.28□□□□□ -1.56
SDS3YIL084C GCV2P49095 1034 aa5.28□□□□□ -1.56
SDS3YIL084C ZDS1P50111 915 aaKnown RBP5.28□□□□□ -1.56
SDS3YIL084C HDA1P53973 706 aa5.28□□□□□ -1.56
SDS3YIL084C TFB2Q02939 513 aa5.28□□□□□ -1.56
SDS3YIL084C DUS4Q06063 367 aa5.28□□□□□ -1.56
SDS3YIL084C ACK1Q07622 623 aaPredicted RBP5.28□□□□□ -1.56
SDS3YIL084C HMI1Q12039 706 aa5.28□□□□□ -1.56
SDS3YIL084C FKS3Q04952 1785 aa5.27□□□□□ -1.57
SDS3YIL084C CDC9P04819 755 aa5.27□□□□□ -1.57
SDS3YIL084C HIS5P07172 385 aa5.27□□□□□ -1.57
SDS3YIL084C PER1P25625 357 aa5.27□□□□□ -1.57
SDS3YIL084C RPD3P32561 433 aa5.27□□□□□ -1.57
SDS3YIL084C SHR5P41912 237 aa5.27□□□□□ -1.57
SDS3YIL084C SSL1Q04673 461 aaPredicted RBP5.27□□□□□ -1.57
SDS3YIL084C NOP12Q08208 459 aaKnown RBP5.27□□□□□ -1.57
SDS3YIL084C PUS9Q12069 462 aa5.27□□□□□ -1.57
SDS3YIL084C PRC1P00729 532 aa5.26□□□□□ -1.57
SDS3YIL084C SRD1P09007 221 aa5.26□□□□□ -1.57
SDS3YIL084C PRP45P28004 379 aaPredicted RBP5.26□□□□□ -1.57
SDS3YIL084C RPN10P38886 268 aaKnown RBP5.26□□□□□ -1.57
SDS3YIL084C SET5P38890 526 aaKnown RBP5.26□□□□□ -1.57
SDS3YIL084C CAF16P43569 289 aa5.26□□□□□ -1.57
SDS3YIL084C ALY2P47029 1046 aa5.26□□□□□ -1.57
SDS3YIL084C VPS62P53285 467 aa5.26□□□□□ -1.57
SDS3YIL084C LRS4Q04087 347 aaKnown RBP5.26□□□□□ -1.57
SDS3YIL084C ADR1P07248 1323 aa5.25□□□□□ -1.57
SDS3YIL084C DIF1O13577 133 aa5.25□□□□□ -1.57
SDS3YIL084C CDC6P09119 513 aa5.25□□□□□ -1.57
SDS3YIL084C RPL8AP17076 256 aaKnown RBP5.25□□□□□ -1.57
SDS3YIL084C SED4P25365 1065 aa5.25□□□□□ -1.57
SDS3YIL084C YEL1P34225 687 aa5.25□□□□□ -1.57
SDS3YIL084C URM1P40554 99 aaPredicted RBP5.25□□□□□ -1.57
SDS3YIL084C RLP7P40693 322 aaKnown RBP5.25□□□□□ -1.57
SDS3YIL084C TY4A-JP47023 414 aa5.25□□□□□ -1.57
SDS3YIL084C YJR142WP47173 342 aa5.25□□□□□ -1.57
SDS3YIL084C LYS4P49367 693 aaPredicted RBP5.25□□□□□ -1.57
SDS3YIL084C YNL193WP53870 558 aa5.25□□□□□ -1.57
SDS3YIL084C DNM1P54861 757 aa5.25□□□□□ -1.57
SDS3YIL084C SNP1Q00916 300 aaPredicted RBP5.25□□□□□ -1.57
SDS3YIL084C YAP6Q03935 383 aa5.25□□□□□ -1.57
SDS3YIL084C YOR022CQ12204 715 aa5.25□□□□□ -1.57
SDS3YIL084C RAD9P14737 1309 aa5.24□□□□□ -1.57
SDS3YIL084C RAD18P10862 487 aa5.24□□□□□ -1.57
SDS3YIL084C YCL002CP25565 263 aa5.24□□□□□ -1.57
SDS3YIL084C CDC20P26309 610 aa5.24□□□□□ -1.57
SDS3YIL084C TAF5P38129 798 aa5.24□□□□□ -1.57
SDS3YIL084C HLJ1P48353 224 aa5.24□□□□□ -1.57
SDS3YIL084C YGL081WP53156 320 aa5.24□□□□□ -1.57
SDS3YIL084C WHI4Q07655 649 aaKnown RBP5.24□□□□□ -1.57
SDS3YIL084C FBP1P09201 348 aa5.23□□□□□ -1.57
SDS3YIL084C MCD4P36051 919 aa5.23□□□□□ -1.57
SDS3YIL084C SDP1P40479 209 aa5.23□□□□□ -1.57
SDS3YIL084C CHA4P43634 648 aa5.23□□□□□ -1.57
SDS3YIL084C DUS1P53759 423 aaKnown RBP5.23□□□□□ -1.57
SDS3YIL084C COG8Q04632 607 aa5.23□□□□□ -1.57
SDS3YIL084C UPC2Q12151 913 aa5.23□□□□□ -1.57
SDS3YIL084C HAL9Q12180 1030 aa5.23□□□□□ -1.57
SDS3YIL084C YBR182C-AQ8TGU6 64 aa5.23□□□□□ -1.57
SDS3YIL084C HOG1P32485 435 aa5.22□□□□□ -1.57
SDS3YIL084C TRM2P33753 639 aa5.22□□□□□ -1.57
SDS3YIL084C CTF8P38877 133 aa5.22□□□□□ -1.57
SDS3YIL084C DOT5P40553 215 aa5.22□□□□□ -1.57
SDS3YIL084C SDA1P53313 767 aaKnown RBP5.22□□□□□ -1.57
SDS3YIL084C SUN4P53616 420 aa5.22□□□□□ -1.57
SDS3YIL084C PCL2P25693 308 aa5.21□□□□□ -1.58
SDS3YIL084C YHR078WP38799 552 aa5.21□□□□□ -1.58
SDS3YIL084C CRP1P38845 465 aaKnown RBP5.21□□□□□ -1.58
SDS3YIL084C DOT6P40059 670 aaKnown RBP5.21□□□□□ -1.58
SDS3YIL084C HXT16P47185 567 aa5.21□□□□□ -1.58
SDS3YIL084C MSE1P48525 536 aa5.21□□□□□ -1.58
SDS3YIL084C NCS6P53088 359 aa5.21□□□□□ -1.58
SDS3YIL084C NHX1Q04121 633 aa5.21□□□□□ -1.58
SDS3YIL084C CRR1Q05790 422 aa5.21□□□□□ -1.58
SDS3YIL084C YLR224WQ05947 369 aa5.21□□□□□ -1.58
SDS3YIL084C NPC2Q12408 173 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 129.3 ms