RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	RNH70	P53331	553 aa		5.9	□□□□□ -1.46
RPC53	YDL150W	CAD1	P24813	409 aa	Known RBP	5.89	□□□□□ -1.47
RPC53	YDL150W	ERG4	P25340	473 aa		5.89	□□□□□ -1.47
RPC53	YDL150W	SEC21	P32074	935 aa	Known RBP	5.89	□□□□□ -1.47
RPC53	YDL150W	PPG1	P32838	368 aa		5.89	□□□□□ -1.47
RPC53	YDL150W	ERT1	P38140	529 aa		5.89	□□□□□ -1.47
RPC53	YDL150W	HDA1	P53973	706 aa		5.89	□□□□□ -1.47
RPC53	YDL150W	DOS2	P54858	310 aa		5.89	□□□□□ -1.47
RPC53	YDL150W	VPS30	Q02948	557 aa		5.89	□□□□□ -1.47
RPC53	YDL150W	YDL124W	Q07551	312 aa	Known RBP	5.89	□□□□□ -1.47
RPC53	YDL150W	YLR125W	Q12138	136 aa		5.89	□□□□□ -1.47
RPC53	YDL150W	PAF1	P38351	445 aa		5.88	□□□□□ -1.47
RPC53	YDL150W	NUP82	P40368	713 aa		5.88	□□□□□ -1.47
RPC53	YDL150W	CAN1	P04817	590 aa		5.87	□□□□□ -1.47
RPC53	YDL150W	REC104	P33323	182 aa		5.87	□□□□□ -1.47
RPC53	YDL150W	YKR011C	Q02209	353 aa		5.87	□□□□□ -1.47
RPC53	YDL150W	TAF8	Q03750	510 aa		5.87	□□□□□ -1.47
RPC53	YDL150W	UBX5	Q06682	500 aa		5.87	□□□□□ -1.47
RPC53	YDL150W	NUP192	P47054	1683 aa		5.87	□□□□□ -1.47
RPC53	YDL150W	TUB3	P09734	445 aa	Known RBP	5.86	□□□□□ -1.47
RPC53	YDL150W	RPD3	P32561	433 aa		5.86	□□□□□ -1.47
RPC53	YDL150W	TYE7	P33122	291 aa	Predicted RBP	5.86	□□□□□ -1.47
RPC53	YDL150W	SUL1	P38359	859 aa		5.86	□□□□□ -1.47
RPC53	YDL150W	ALG12	P53730	551 aa		5.86	□□□□□ -1.47
RPC53	YDL150W	OMS1	Q06668	471 aa		5.86	□□□□□ -1.47
RPC53	YDL150W	PHO8	P11491	566 aa		5.85	□□□□□ -1.47
RPC53	YDL150W	URA1	P28272	314 aa	Predicted RBP	5.85	□□□□□ -1.47
RPC53	YDL150W	TIM23	P32897	222 aa		5.85	□□□□□ -1.47
RPC53	YDL150W	CTF13	P35203	478 aa		5.85	□□□□□ -1.47
RPC53	YDL150W	YPT53	P36019	220 aa		5.85	□□□□□ -1.47
RPC53	YDL150W	PET10	P36139	283 aa		5.85	□□□□□ -1.47
RPC53	YDL150W	YIL108W	P40483	696 aa	Known RBP	5.85	□□□□□ -1.47
RPC53	YDL150W	RNT1	Q02555	471 aa		5.85	□□□□□ -1.47
RPC53	YDL150W	PEX19	Q07418	342 aa		5.85	□□□□□ -1.47
RPC53	YDL150W	TRM13	Q12383	476 aa		5.85	□□□□□ -1.47
RPC53	YDL150W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.84	□□□□□ -1.47
RPC53	YDL150W	RFA1	P22336	621 aa	Known RBP	5.84	□□□□□ -1.47
RPC53	YDL150W	BRN1	P38170	754 aa		5.84	□□□□□ -1.47
RPC53	YDL150W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
RPC53	YDL150W	TRM11	Q12463	433 aa		5.84	□□□□□ -1.47
RPC53	YDL150W	RAV1	P47104	1357 aa		5.83	□□□□□ -1.48
RPC53	YDL150W	MET6	P05694	767 aa	Known RBP	5.83	□□□□□ -1.48
RPC53	YDL150W	PPR1	P07272	904 aa	Predicted RBP	5.83	□□□□□ -1.48
RPC53	YDL150W	FPR3	P38911	411 aa	Known RBP	5.83	□□□□□ -1.48
RPC53	YDL150W	POB3	Q04636	552 aa	Known RBP	5.83	□□□□□ -1.48
RPC53	YDL150W	HBN1	Q96VH4	193 aa		5.83	□□□□□ -1.48
RPC53	YDL150W	YRF1-2	P40105	1681 aa		5.82	□□□□□ -1.48
RPC53	YDL150W	PRP45	P28004	379 aa	Predicted RBP	5.82	□□□□□ -1.48
RPC53	YDL150W	UBA2	P52488	636 aa		5.82	□□□□□ -1.48
RPC53	YDL150W	ENV7	Q12003	364 aa		5.82	□□□□□ -1.48
RPC53	YDL150W	YPR071W	Q12346	211 aa		5.82	□□□□□ -1.48
RPC53	YDL150W	ALG7	P07286	448 aa		5.81	□□□□□ -1.48
RPC53	YDL150W	MPH2	P0CD99	609 aa		5.81	□□□□□ -1.48
RPC53	YDL150W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
RPC53	YDL150W	TMN2	Q04562	672 aa		5.81	□□□□□ -1.48
RPC53	YDL150W	RAD9	P14737	1309 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	RTC1	Q08281	1341 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	MSD1	P15179	658 aa	Known RBP	5.8	□□□□□ -1.48
RPC53	YDL150W	THI4	P32318	326 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	SPC42	P36094	363 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	BET3	P36149	193 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	YBR284W	P38150	797 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	YHR078W	P38799	552 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	CEP3	P40969	608 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	RPN11	P43588	306 aa	Known RBP	5.8	□□□□□ -1.48
RPC53	YDL150W	RTA1	P53047	317 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	UTP14	Q04500	899 aa	Known RBP	5.8	□□□□□ -1.48
RPC53	YDL150W	MCH5	Q08777	521 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	ACF2	Q12168	779 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	SWM1	Q12379	170 aa		5.8	□□□□□ -1.48
RPC53	YDL150W	TOM70	P07213	617 aa	Known RBP	5.79	□□□□□ -1.48
RPC53	YDL150W	ERR1	P0CX10	437 aa		5.79	□□□□□ -1.48
RPC53	YDL150W	ERR2	P0CX11	437 aa		5.79	□□□□□ -1.48
RPC53	YDL150W	PRP4	P20053	465 aa	Known RBP	5.79	□□□□□ -1.48
RPC53	YDL150W	QRI1	P43123	477 aa	Known RBP	5.79	□□□□□ -1.48
RPC53	YDL150W	UBP6	P43593	499 aa	Known RBP	5.79	□□□□□ -1.48
RPC53	YDL150W	STB4	P50104	949 aa		5.79	□□□□□ -1.48
RPC53	YDL150W	RRP5	Q05022	1729 aa	Known RBP	5.79	□□□□□ -1.48
RPC53	YDL150W	MLP1	Q02455	1875 aa	Known RBP	5.79	□□□□□ -1.48
RPC53	YDL150W	TAF5	P38129	798 aa		5.78	□□□□□ -1.48
RPC53	YDL150W	ASI2	P53895	289 aa		5.78	□□□□□ -1.48
RPC53	YDL150W	TOP3	P13099	656 aa		5.77	□□□□□ -1.49
RPC53	YDL150W	NOG2	P53742	486 aa	Known RBP	5.77	□□□□□ -1.49
RPC53	YDL150W	FRE5	Q08908	694 aa		5.77	□□□□□ -1.49
RPC53	YDL150W	EDE1	P34216	1381 aa		5.77	□□□□□ -1.49
RPC53	YDL150W	RPS9A	O13516	197 aa	Known RBP	5.76	□□□□□ -1.49
RPC53	YDL150W	MET3	P08536	511 aa		5.76	□□□□□ -1.49
RPC53	YDL150W	MSH2	P25847	964 aa		5.76	□□□□□ -1.49
RPC53	YDL150W	MNN1	P39106	762 aa		5.76	□□□□□ -1.49
RPC53	YDL150W	GDH3	P39708	457 aa		5.76	□□□□□ -1.49
RPC53	YDL150W	ELO3	P40319	345 aa		5.76	□□□□□ -1.49
RPC53	YDL150W	HSV2	P50079	448 aa	Predicted RBP	5.76	□□□□□ -1.49
RPC53	YDL150W	DUS1	P53759	423 aa	Known RBP	5.76	□□□□□ -1.49
RPC53	YDL150W	TIM44	Q01852	431 aa		5.76	□□□□□ -1.49
RPC53	YDL150W	UGO1	Q03327	502 aa		5.76	□□□□□ -1.49
RPC53	YDL150W	DLT1	Q04216	342 aa		5.76	□□□□□ -1.49
RPC53	YDL150W	EMC3	P36039	253 aa		5.75	□□□□□ -1.49
RPC53	YDL150W	RPP1	P38786	293 aa		5.75	□□□□□ -1.49
RPC53	YDL150W	DOT5	P40553	215 aa		5.75	□□□□□ -1.49
RPC53	YDL150W	MRPS35	P53292	345 aa		5.75	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms