RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	EFM3	P47163	339 aa		4	□□□□□ -1.77
RPO21	YDL140C	NNF2	P53253	936 aa		4	□□□□□ -1.77
RPO21	YDL140C	TOF1	P53840	1238 aa		4	□□□□□ -1.77
RPO21	YDL140C	CDA1	Q06702	301 aa		4	□□□□□ -1.77
RPO21	YDL140C	PTC5	Q12511	572 aa		4	□□□□□ -1.77
RPO21	YDL140C	PRD1	P25375	712 aa		4	□□□□□ -1.77
RPO21	YDL140C	BMH2	P34730	273 aa	Known RBP	4	□□□□□ -1.77
RPO21	YDL140C	KRE28	Q04431	385 aa		4	□□□□□ -1.77
RPO21	YDL140C	RRN11	Q04712	507 aa		4	□□□□□ -1.77
RPO21	YDL140C	OXR1	Q08952	273 aa		4	□□□□□ -1.77
RPO21	YDL140C	SGT2	Q12118	346 aa	Known RBP	4	□□□□□ -1.77
RPO21	YDL140C	CPA1	P07258	411 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	TIF1	P10081	395 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	PHO8	P11491	566 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	PRP22	P24384	1145 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	APD1	P38281	316 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	PCA1	P38360	1216 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	RGA1	P39083	1007 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	YEL020C	P39994	560 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	CNN1	P43618	361 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	ASK10	P48361	1146 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	YMR102C	Q03177	834 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	RCR2	Q03446	210 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	OMS1	Q06668	471 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	LDB18	Q07887	179 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	CWC2	Q12046	339 aa	Predicted RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	MCM16	Q12262	181 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	LAM4	P38800	1345 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	NAT1	P12945	854 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	CAF20	P12962	161 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	ATE1	P16639	503 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	DIT2	P21595	489 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	SRM1	P21827	482 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	ERG6	P25087	383 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	RVS167	P39743	482 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	EMW1	P42842	904 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	RPS15	Q01855	142 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	KIP1	P28742	1111 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	CDC12	P32468	407 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	KTR2	P33550	425 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	CIC1	P38779	376 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	IRC6	P43615	237 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	SDT1	P53078	280 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	YGL138C	P53122	345 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	BNI4	P53858	892 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	YEH1	Q07804	573 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	PKH2	Q12236	1081 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	BET2	P20133	325 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	PEP3	P27801	918 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	EAP1	P36041	632 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	PGM2	P37012	569 aa	Known RBP	3.99	□□□□□ -1.77
RPO21	YDL140C	ALR2	P43553	858 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	VID22	Q05934	901 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	GRS2	Q06817	618 aa		3.99	□□□□□ -1.77
RPO21	YDL140C	CPA2	P03965	1118 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	ADE3	P07245	946 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	POL3	P15436	1097 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	RPC31	P17890	251 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	ZIP1	P31111	875 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	NUD1	P32336	851 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	NIP1	P32497	812 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	YHL017W	P38745	532 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	RTT107	P38850	1070 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	YHR202W	P38887	602 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	SLX8	P40072	274 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	AZR1	P50080	613 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	YGR250C	P53316	781 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	YNR021W	P53723	404 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	LEE1	Q02799	301 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	UTP4	Q06679	776 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	COX17	Q12287	69 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	PDR5	P33302	1511 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	CSE2	P33308	149 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	TSA1	P34760	196 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	VID24	P38263	362 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	DRN1	P53255	507 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	YNL143C	P53908	130 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	SPP382	Q06411	708 aa	Predicted RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	HIM1	Q06674	414 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	TY1B-DR4	Q07793	1604 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	LCB4	Q12246	624 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	HVG1	P0CE11	249 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	RAD18	P10862	487 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	VAC17	P25591	423 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	GLO3	P38682	493 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	TPA1	P40032	644 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	LEM3	P42838	414 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	SND1	Q04007	877 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	PCD1	Q12524	340 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	STE6	P12866	1290 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	YBP1	P38315	674 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	NPR2	P39923	615 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	SET2	P46995	733 aa	Known RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	YGR237C	P50089	785 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	FMS1	P50264	508 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	YGL108C	P53139	140 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	YGL036W	P53185	909 aa	Predicted RBP	3.98	□□□□□ -1.77
RPO21	YDL140C	SRT1	Q03175	343 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	PEX19	Q07418	342 aa		3.98	□□□□□ -1.77
RPO21	YDL140C	SLK19	Q08581	821 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms